RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 NME2P22392 152 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 NRLP54845 237 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 TNP2Q05952 138 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 SSRP1Q08945 709 aaKnown RBP7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 LAMC2Q13753 1193 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 LLGL2Q6P1M3 1020 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 REXO1Q8N1G1 1221 aaKnown RBP7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 THAP3Q8WTV1 239 aaPredicted RBP7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 SLC30A3Q99726 388 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 PBX4Q9BYU1 374 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 NUCKS1Q9H1E3 243 aaKnown RBP7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 RBSNQ9H1K0 784 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 CLEC4MQ9H2X3 399 aaPredicted RBP7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 CHPF2Q9P2E5 772 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 CYP8B1Q9UNU6 501 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 PTCH2Q9Y6C5 1203 aa7.9□□□□□ -1.14
PPFIA2-226ENST00000552020 RUSC2Q8N2Y8 1516 aa7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 LOC102724428A0A0B4J2F2 783 aa7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 DIAPH1O60610 1272 aaKnown RBP7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 ASMTLO95671 621 aa7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 HOXD8P13378 290 aaPredicted RBP7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 EIF2AK2P19525 551 aaKnown RBP7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 MASP1P48740 699 aa7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 SIK1P57059 783 aa7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 PCDH1Q08174 1060 aa7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 NEUROD1Q13562 356 aa7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 RUFY4Q6ZNE9 571 aa7.89□□□□□ -1.15
PPFIA2-226ENST00000552020 BMP6P22004 513 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 CNGA1P29973 690 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 TCEA2Q15560 299 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 C21orf62-AS1Q17RA5 79 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 CEP135Q66GS9 1140 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 C6orf15Q6UXA7 325 aaPredicted RBP7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 SPATC1Q76KD6 591 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 PRPF38AQ8NAV1 312 aaKnown RBP7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 GRIN3AQ8TCU5 1115 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 SLC16A10Q8TF71 515 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 EFCC1Q9HA90 598 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 DNMT3LQ9UJW3 386 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 ADAMTSL3P82987 1691 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 EPRSP07814 1512 aaKnown RBP7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 ABCC2Q92887 1545 aa7.88□□□□□ -1.15
PPFIA2-226ENST00000552020 SMNDC1O75940 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 CASP7P55210 303 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 GPLD1P80108 840 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 FAM178BQ8IXR5 827 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 MICALL1Q8N3F8 863 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 STK35Q8TDR2 534 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 STAG1Q8WVM7 1258 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 BSNDQ8WZ55 320 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 ABHD17AQ96GS6 310 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 EMILIN2Q9BXX0 1053 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 SUGT1Q9Y2Z0 365 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 CD2APQ9Y5K6 639 aa7.87□□□□□ -1.15
PPFIA2-226ENST00000552020 PTPRGP23470 1445 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 THBS1P07996 1170 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 PDGFRBP09619 1106 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 ARNTP27540 789 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 FERMT3Q86UX7 667 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 CERS3Q8IU89 383 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 RBBP8NLQ8NC74 664 aaPredicted RBP7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 JDP2Q8WYK2 163 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 GAL3ST3Q96A11 431 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 CEP89Q96ST8 783 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 POP1Q99575 1024 aaKnown RBP7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 UBE2OQ9C0C9 1292 aaKnown RBP7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 ZMYM5Q9UJ78 669 aa7.86□□□□□ -1.15
PPFIA2-226ENST00000552020 SENP3-EIF4A1A0A087X0R7 540 aa7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 FAM177BA6PVY3 158 aa7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 BNIP3LO60238 219 aa7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 MAN1A2O60476 641 aa7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 B3GALT4O96024 378 aa7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 RPL6Q02878 288 aaKnown RBP7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 ODR4Q5SWX8 454 aa7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 TTC6Q86TZ1 520 aa7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 ZFP42Q96MM3 310 aa7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 ANTXR1Q9H6X2 564 aa7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 POLR3KQ9Y2Y1 108 aaPredicted RBP7.85□□□□□ -1.15
PPFIA2-226ENST00000552020 ERICH3Q5RHP9 1530 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 A0A1W2PQH9 124 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 ZBTB42B2RXF5 422 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 H7C1W4 665 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 ZNF423Q2M1K9 1284 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 MAP1SQ66K74 1059 aaPredicted RBP7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 TRIM46Q7Z4K8 759 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 C19orf47Q8N9M1 422 aaKnown RBP7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 TRERF1Q96PN7 1200 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 EHMT1Q9H9B1 1298 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 HOMER2Q9NSB8 354 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 DNAJB12Q9NXW2 375 aaKnown RBP7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 MADDQ8WXG6 1647 aa7.84□□□□□ -1.15
PPFIA2-226ENST00000552020 PTPRAP18433 802 aa7.83□□□□□ -1.16
PPFIA2-226ENST00000552020 PTPN11Q06124 597 aaPredicted RBP7.83□□□□□ -1.16
PPFIA2-226ENST00000552020 DALRD3Q5D0E6 543 aaKnown RBP7.83□□□□□ -1.16
PPFIA2-226ENST00000552020 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.83□□□□□ -1.16
PPFIA2-226ENST00000552020 DHX37Q8IY37 1157 aaKnown RBP7.83□□□□□ -1.16
PPFIA2-226ENST00000552020 ZSWIM2Q8NEG5 633 aa7.83□□□□□ -1.16
PPFIA2-226ENST00000552020 ST13P5Q8NFI4 369 aaPredicted RBP7.83□□□□□ -1.16
PPFIA2-226ENST00000552020 DDX54Q8TDD1 881 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms