RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 HOXD8P13378 290 aaPredicted RBP9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 ZAP70P43403 619 aa9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 CHRNA2Q15822 529 aa9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 TTC39BQ5VTQ0 682 aaPredicted RBP9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 GDF6Q6KF10 455 aaPredicted RBP9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 CACTIN-AS1Q8N1I8 211 aa9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 TP53INP1Q96A56 240 aa9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 NUDT16Q96DE0 195 aaKnown RBP9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 SPACA7Q96KW9 195 aa9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 BLMP54132 1417 aaPredicted RBP9.97□□□□□ -0.81
GNPTAB-209ENST00000552009 TNFRSF10BO14763 440 aa9.96□□□□□ -0.82
GNPTAB-209ENST00000552009 ATP2B4P23634 1241 aa9.96□□□□□ -0.82
GNPTAB-209ENST00000552009 KRT27Q7Z3Y8 459 aa9.96□□□□□ -0.82
GNPTAB-209ENST00000552009 CDK19Q9BWU1 502 aa9.96□□□□□ -0.82
GNPTAB-209ENST00000552009 SRA1Q9HD15 236 aaKnown RBP9.96□□□□□ -0.82
GNPTAB-209ENST00000552009 NWD2Q9ULI1 1742 aa9.96□□□□□ -0.82
GNPTAB-209ENST00000552009 CRYBG1Q9Y4K1 1723 aa9.96□□□□□ -0.82
GNPTAB-209ENST00000552009 HYAL2Q12891 473 aa9.95□□□□□ -0.82
GNPTAB-209ENST00000552009 TRIP4Q15650 581 aaPredicted RBP9.95□□□□□ -0.82
GNPTAB-209ENST00000552009 MAP4K3Q8IVH8 894 aa9.95□□□□□ -0.82
GNPTAB-209ENST00000552009 IL22RA1Q8N6P7 574 aa9.95□□□□□ -0.82
GNPTAB-209ENST00000552009 GPR152Q8TDT2 470 aa9.95□□□□□ -0.82
GNPTAB-209ENST00000552009 MUC3BQ9H195 1237 aa9.95□□□□□ -0.82
GNPTAB-209ENST00000552009 PRDM11Q9NQV5 511 aa9.95□□□□□ -0.82
GNPTAB-209ENST00000552009 COL14A1Q05707 1796 aaKnown RBP9.94□□□□□ -0.82
GNPTAB-209ENST00000552009 KIAA0232Q92628 1395 aa9.94□□□□□ -0.82
GNPTAB-209ENST00000552009 SCO2A0A1W2PP80 73 aa9.94□□□□□ -0.82
GNPTAB-209ENST00000552009 ITGB7P26010 798 aa9.94□□□□□ -0.82
GNPTAB-209ENST00000552009 ZC3H6P61129 1189 aaKnown RBP9.94□□□□□ -0.82
GNPTAB-209ENST00000552009 CAPN12Q6ZSI9 719 aa9.94□□□□□ -0.82
GNPTAB-209ENST00000552009 WFDC12Q8WWY7 111 aa9.94□□□□□ -0.82
GNPTAB-209ENST00000552009 USP35Q9P2H5 1018 aa9.94□□□□□ -0.82
GNPTAB-209ENST00000552009 EIF3AQ14152 1382 aaKnown RBP9.93□□□□□ -0.82
GNPTAB-209ENST00000552009 ACEP12821 1306 aa9.93□□□□□ -0.82
GNPTAB-209ENST00000552009 SCNN1AP37088 669 aa9.93□□□□□ -0.82
GNPTAB-209ENST00000552009 IREB2P48200 963 aaKnown RBP9.93□□□□□ -0.82
GNPTAB-209ENST00000552009 PRSS36Q5K4E3 855 aa9.93□□□□□ -0.82
GNPTAB-209ENST00000552009 TTC16Q8NEE8 873 aa9.93□□□□□ -0.82
GNPTAB-209ENST00000552009 OR13H1Q8NG92 308 aa9.93□□□□□ -0.82
GNPTAB-209ENST00000552009 PHRF1Q9P1Y6 1649 aaKnown RBP9.93□□□□□ -0.82
GNPTAB-209ENST00000552009 SPATA31A5Q5VU36 1347 aa9.92□□□□□ -0.82
GNPTAB-209ENST00000552009 SPATA31A7Q8IWB4 1347 aa9.92□□□□□ -0.82
GNPTAB-209ENST00000552009 FAM177BA6PVY3 158 aa9.92□□□□□ -0.82
GNPTAB-209ENST00000552009 RPLP1P05386 114 aaKnown RBP9.92□□□□□ -0.82
GNPTAB-209ENST00000552009 SF3B2Q13435 895 aaKnown RBP9.92□□□□□ -0.82
GNPTAB-209ENST00000552009 GTF3C3Q9Y5Q9 886 aa9.92□□□□□ -0.82
GNPTAB-209ENST00000552009 TOPAZ1Q8N9V7 1692 aa9.92□□□□□ -0.82
GNPTAB-209ENST00000552009 ITSN1Q15811 1721 aa9.91□□□□□ -0.82
GNPTAB-209ENST00000552009 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
GNPTAB-209ENST00000552009 SMNDC1O75940 238 aaKnown RBP eCLIP9.91□□□□□ -0.82
GNPTAB-209ENST00000552009 PCSK2P16519 638 aa9.91□□□□□ -0.82
GNPTAB-209ENST00000552009 NBPF8Q3BBV2 869 aa9.91□□□□□ -0.82
GNPTAB-209ENST00000552009 SIN3AQ96ST3 1273 aa9.91□□□□□ -0.82
GNPTAB-209ENST00000552009 MRPL18Q9H0U6 180 aaKnown RBP9.91□□□□□ -0.82
GNPTAB-209ENST00000552009 THSD7AQ9UPZ6 1657 aa9.9□□□□□ -0.82
GNPTAB-209ENST00000552009 NRKQ7Z2Y5 1582 aa9.9□□□□□ -0.82
GNPTAB-209ENST00000552009 DLL1O00548 723 aa9.9□□□□□ -0.82
GNPTAB-209ENST00000552009 DEAF1O75398 565 aaPredicted RBP9.9□□□□□ -0.82
GNPTAB-209ENST00000552009 FAM26DQ5JW98 314 aa9.9□□□□□ -0.82
GNPTAB-209ENST00000552009 ABI2Q9NYB9 513 aaPredicted RBP9.9□□□□□ -0.82
GNPTAB-209ENST00000552009 PPIP5K1Q6PFW1 1433 aa9.9□□□□□ -0.83
GNPTAB-209ENST00000552009 POLR3AO14802 1390 aaPredicted RBP9.89□□□□□ -0.83
GNPTAB-209ENST00000552009 SPATA31A1Q5TZJ5 1347 aa9.89□□□□□ -0.83
GNPTAB-209ENST00000552009 NOS3P29474 1203 aa9.89□□□□□ -0.83
GNPTAB-209ENST00000552009 AKTIPQ9H8T0 292 aa9.89□□□□□ -0.83
GNPTAB-209ENST00000552009 TRIM33Q9UPN9 1127 aa9.89□□□□□ -0.83
GNPTAB-209ENST00000552009 PPME1Q9Y570 386 aa9.89□□□□□ -0.83
GNPTAB-209ENST00000552009 CENPJQ9HC77 1338 aaPredicted RBP9.88□□□□□ -0.83
GNPTAB-209ENST00000552009 QRICH2Q9H0J4 1663 aa9.88□□□□□ -0.83
GNPTAB-209ENST00000552009 CAMTA1Q9Y6Y1 1673 aa9.88□□□□□ -0.83
GNPTAB-209ENST00000552009 CEP135Q66GS9 1140 aa9.88□□□□□ -0.83
GNPTAB-209ENST00000552009 PDE12Q6L8Q7 609 aaKnown RBP9.88□□□□□ -0.83
GNPTAB-209ENST00000552009 SSBP4Q9BWG4 385 aaPredicted RBP9.88□□□□□ -0.83
GNPTAB-209ENST00000552009 SEPT3Q9UH03 358 aa9.88□□□□□ -0.83
GNPTAB-209ENST00000552009 ZBTB39O15060 712 aa9.87□□□□□ -0.83
GNPTAB-209ENST00000552009 TRIM37O94972 964 aa9.87□□□□□ -0.83
GNPTAB-209ENST00000552009 EZH2Q15910 746 aaKnown RBP9.87□□□□□ -0.83
GNPTAB-209ENST00000552009 ZNF438Q7Z4V0 828 aa9.87□□□□□ -0.83
GNPTAB-209ENST00000552009 NCAPG2Q86XI2 1143 aa9.87□□□□□ -0.83
GNPTAB-209ENST00000552009 SSH2Q76I76 1423 aa9.87□□□□□ -0.83
GNPTAB-209ENST00000552009 KIAA1210Q9ULL0 1709 aa9.87□□□□□ -0.83
GNPTAB-209ENST00000552009 EVA1CP58658 441 aa9.86□□□□□ -0.83
GNPTAB-209ENST00000552009 R3HDM1Q15032 1099 aaKnown RBP9.86□□□□□ -0.83
GNPTAB-209ENST00000552009 FAM117BQ6P1L5 589 aa9.86□□□□□ -0.83
GNPTAB-209ENST00000552009 TMEM130Q8N3G9 435 aa9.86□□□□□ -0.83
GNPTAB-209ENST00000552009 HELQQ8TDG4 1101 aa9.86□□□□□ -0.83
GNPTAB-209ENST00000552009 ELP3Q9H9T3 547 aa9.86□□□□□ -0.83
GNPTAB-209ENST00000552009 TNS1Q9HBL0 1735 aaKnown RBP9.86□□□□□ -0.83
GNPTAB-209ENST00000552009 CDC27P30260 824 aa9.85□□□□□ -0.83
GNPTAB-209ENST00000552009 SETDB1Q15047 1291 aa9.85□□□□□ -0.83
GNPTAB-209ENST00000552009 LACRTQ9GZZ8 138 aa9.85□□□□□ -0.83
GNPTAB-209ENST00000552009 MTMR7Q9Y216 660 aa9.85□□□□□ -0.83
GNPTAB-209ENST00000552009 RGPD1P0DJD0 1748 aa9.85□□□□□ -0.83
GNPTAB-209ENST00000552009 USP19O94966 1318 aa9.84□□□□□ -0.83
GNPTAB-209ENST00000552009 LMO7Q8WWI1 1683 aa9.84□□□□□ -0.83
GNPTAB-209ENST00000552009 GCP02774 474 aa9.84□□□□□ -0.83
GNPTAB-209ENST00000552009 NOM1Q5C9Z4 860 aaKnown RBP9.84□□□□□ -0.83
GNPTAB-209ENST00000552009 COL13A1Q5TAT6 717 aaPredicted RBP9.84□□□□□ -0.83
GNPTAB-209ENST00000552009 USP6P35125 1406 aa9.83□□□□□ -0.84
GNPTAB-209ENST00000552009 TRPM1Q7Z4N2 1603 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms