RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 ZSCAN29Q8IWY8 852 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-210ENST00000551981 IDI2Q9BXS1 227 aa17.66■□□□□ 0.42
CHMP1A-210ENST00000551981 SLC45A1Q9Y2W3 748 aa17.66■□□□□ 0.42
CHMP1A-210ENST00000551981 LRRFIP2Q9Y608 721 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-210ENST00000551981 ATRNL1Q5VV63 1379 aa17.66■□□□□ 0.42
CHMP1A-210ENST00000551981 DOCK1Q14185 1865 aa17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 PHF20L1A8MW92 1017 aa17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 UBTFL1P0CB47 393 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 PTPRAP18433 802 aa17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 IL15P40933 162 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 GADL1Q6ZQY3 521 aa17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 UBE2Q1Q7Z7E8 422 aa17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 ZFPM1Q8IX07 1006 aa17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 SLF2Q8IX21 1173 aa17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 U2AF1L4Q8WU68 220 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 RBM27Q9P2N5 1060 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 HDAC5Q9UQL6 1122 aa17.65■□□□□ 0.42
CHMP1A-210ENST00000551981 PTPRFP10586 1907 aa17.64■□□□□ 0.42
CHMP1A-210ENST00000551981 ADCY3O60266 1144 aa17.64■□□□□ 0.41
CHMP1A-210ENST00000551981 FARP2O94887 1054 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-210ENST00000551981 CAPN2P17655 700 aa17.64■□□□□ 0.41
CHMP1A-210ENST00000551981 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.41
CHMP1A-210ENST00000551981 DZIP1Q86YF9 867 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-210ENST00000551981 SMCR8Q8TEV9 937 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-210ENST00000551981 UNC93B1Q9H1C4 597 aa17.64■□□□□ 0.41
CHMP1A-210ENST00000551981 TNPO2O14787 897 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-210ENST00000551981 ZBTB22O15209 634 aa17.63■□□□□ 0.41
CHMP1A-210ENST00000551981 CTNND1O60716 968 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-210ENST00000551981 PHKA1P46020 1223 aa17.63■□□□□ 0.41
CHMP1A-210ENST00000551981 SMC4Q9NTJ3 1288 aa17.63■□□□□ 0.41
CHMP1A-210ENST00000551981 GABRQQ9UN88 632 aa17.63■□□□□ 0.41
CHMP1A-210ENST00000551981 AFG3L2Q9Y4W6 797 aa17.63■□□□□ 0.41
CHMP1A-210ENST00000551981 GAKO14976 1311 aa17.63■□□□□ 0.41
CHMP1A-210ENST00000551981 SGPL1O95470 568 aa17.62■□□□□ 0.41
CHMP1A-210ENST00000551981 FLT3LGP49771 235 aa17.62■□□□□ 0.41
CHMP1A-210ENST00000551981 SPTY2D1Q68D10 685 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-210ENST00000551981 CCDC102BQ68D86 513 aa17.62■□□□□ 0.41
CHMP1A-210ENST00000551981 PXYLP1Q8TE99 480 aa17.62■□□□□ 0.41
CHMP1A-210ENST00000551981 ABCF2Q9UG63 623 aa17.62■□□□□ 0.41
CHMP1A-210ENST00000551981 PHIPQ8WWQ0 1821 aa17.62■□□□□ 0.41
CHMP1A-210ENST00000551981 RFX7Q2KHR2 1363 aa17.62■□□□□ 0.41
CHMP1A-210ENST00000551981 INHAP05111 366 aa17.61■□□□□ 0.41
CHMP1A-210ENST00000551981 MAP3K10Q02779 954 aa17.61■□□□□ 0.41
CHMP1A-210ENST00000551981 IRF5Q13568 498 aa17.61■□□□□ 0.41
CHMP1A-210ENST00000551981 PDS5AQ29RF7 1337 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-210ENST00000551981 TRIM75PA6NK02 468 aa17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 ZBTB7BO15156 539 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 EVI5O60447 810 aa17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 TFRCP02786 760 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 ELNP15502 786 aa17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 PICALMQ13492 652 aa17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 SH3BP5LQ7L8J4 393 aa17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 COA7Q96BR5 231 aa17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 PNMA3Q9UL41 463 aa17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 AGTPBP1Q9UPW5 1226 aa17.6■□□□□ 0.41
CHMP1A-210ENST00000551981 MROH7-TTC4A0A0A0MT08 1334 aa17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 ZNF316A6NFI3 1004 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 DDTLA6NHG4 134 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 ADORA1P30542 326 aa17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 BTDP43251 543 aa17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 SLFN5Q08AF3 891 aa17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 RASGRF1Q13972 1273 aa17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 FAM163AQ96GL9 167 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 DEFB118Q96PH6 123 aa17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 PRO3102Q9H379 93 aa17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 COPRSQ9NQ92 184 aa17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 TAOK2Q9UL54 1235 aa17.59■□□□□ 0.41
CHMP1A-210ENST00000551981 A0A1W2PPC1 479 aa17.58■□□□□ 0.4
CHMP1A-210ENST00000551981 DDX4Q9NQI0 724 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-210ENST00000551981 PA2G4Q9UQ80 394 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-210ENST00000551981 TBC1D12O60347 775 aa17.57■□□□□ 0.4
CHMP1A-210ENST00000551981 MVPQ14764 893 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-210ENST00000551981 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
CHMP1A-210ENST00000551981 ANKRD13CQ8N6S4 541 aa17.57■□□□□ 0.4
CHMP1A-210ENST00000551981 PROCA1Q8NCQ7 364 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-210ENST00000551981 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-210ENST00000551981 PAK6Q9NQU5 681 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-210ENST00000551981 AKAP2Q9Y2D5 859 aa17.57■□□□□ 0.4
CHMP1A-210ENST00000551981 LOC285556D6RIA3 1793 aa17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 DOCK3Q8IZD9 2030 aa17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 GPR75-ASB3A0A0A6YYF3 556 aa17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 MAP4K4O95819 1239 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 TIMM10P62072 90 aa17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 GSTO1P78417 241 aa17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 PABPC4Q13310 644 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 FAM110CQ1W6H9 321 aa17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 TBC1D2Q9BYX2 928 aa17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.56■□□□□ 0.48e-18■■■■■ 88.3
CHMP1A-210ENST00000551981 ATAD5Q96QE3 1844 aa17.56■□□□□ 0.4
CHMP1A-210ENST00000551981 A0A1B0GUL7 405 aa17.55■□□□□ 0.4
CHMP1A-210ENST00000551981 CT47B1P0C2W7 299 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-210ENST00000551981 GCLCP48506 637 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-210ENST00000551981 MECOMQ03112 1051 aa17.55■□□□□ 0.4
CHMP1A-210ENST00000551981 TREML2Q5T2D2 321 aa17.55■□□□□ 0.4
CHMP1A-210ENST00000551981 XAGE2Q96GT9 111 aa17.55■□□□□ 0.4
CHMP1A-210ENST00000551981 CRISPLD2Q9H0B8 497 aa17.55■□□□□ 0.4
CHMP1A-210ENST00000551981 OSBPL5Q9H0X9 879 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-210ENST00000551981 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-210ENST00000551981 NOB1Q9ULX3 412 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms