RNA–Protein interactions for RNA: ENST00000551861.1

ITGA5-208, Transcript of integrin subunit alpha 5, human

TSL 4

Gene ITGA5, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGA5-208	ENST00000551861	BRCA2	P51587	3418 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	PDS5A	Q29RF7	1337 aa	Known RBP	13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	LDHC	P07864	332 aa		13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	BTD	P43251	543 aa		13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	RARS	P54136	660 aa	Known RBP	13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	FCGRT	P55899	365 aa		13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	GSTO1	P78417	241 aa		13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	RASGRF1	Q13972	1273 aa		13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	NKX2-3	Q8TAU0	364 aa		13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	TRIM47	Q96LD4	638 aa		13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	BIN2	Q9UBW5	565 aa	Predicted RBP	13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	SRRD	Q9UH36	339 aa		13.65	□□□□□ -0.22
ITGA5-208	ENST00000551861	GAK	O14976	1311 aa		13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	GNAI2	P04899	355 aa		13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	UBXN2A	P68543	259 aa		13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	TFCP2	Q12800	502 aa		13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	GADL1	Q6ZQY3	521 aa		13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	ZFPM1	Q8IX07	1006 aa		13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	FRAT1	Q92837	279 aa	Predicted RBP	13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	FAM163A	Q96GL9	167 aa	Predicted RBP	13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	NOL10	Q9BSC4	688 aa	Known RBP	13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	MKI67	P46013	3256 aa	Known RBP	13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	MROH7-TTC4	A0A0A0MT08	1334 aa		13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	MYPN	Q86TC9	1320 aa		13.64	□□□□□ -0.23
ITGA5-208	ENST00000551861	CTNND1	O60716	968 aa	Known RBP	13.63	□□□□□ -0.23
ITGA5-208	ENST00000551861	GRK4	P32298	578 aa		13.63	□□□□□ -0.23
ITGA5-208	ENST00000551861	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.63	□□□□□ -0.23
ITGA5-208	ENST00000551861	MYH2	Q9UKX2	1941 aa		13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861		A0A0G2JLL6	359 aa	Predicted RBP	13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	MAP4K4	O95819	1239 aa	Predicted RBP	13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	CYP2C8	P10632	490 aa		13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	PTPRA	P18433	802 aa		13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	OSBP	P22059	807 aa		13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	MECOM	Q03112	1051 aa		13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	MTX1	Q13505	466 aa		13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	HABP4	Q5JVS0	413 aa	Known RBP	13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	SPATA5	Q8NB90	893 aa		13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	RAI14	Q9P0K7	980 aa		13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	SLC45A1	Q9Y2W3	748 aa		13.62	□□□□□ -0.23
ITGA5-208	ENST00000551861	GPR75-ASB3	A0A0A6YYF3	556 aa		13.61	□□□□□ -0.23
ITGA5-208	ENST00000551861	DDTL	A6NHG4	134 aa	Predicted RBP	13.61	□□□□□ -0.23
ITGA5-208	ENST00000551861	PHF20L1	A8MW92	1017 aa		13.61	□□□□□ -0.23
ITGA5-208	ENST00000551861	UQCRFS1P1	P0C7P4	283 aa		13.61	□□□□□ -0.23
ITGA5-208	ENST00000551861	OS9	Q13438	667 aa	Predicted RBP	13.61	□□□□□ -0.23
ITGA5-208	ENST00000551861	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
ITGA5-208	ENST00000551861	LRP2BP	Q9P2M1	347 aa		13.61	□□□□□ -0.23
ITGA5-208	ENST00000551861	PNMA3	Q9UL41	463 aa		13.61	□□□□□ -0.23
ITGA5-208	ENST00000551861	AFG3L2	Q9Y4W6	797 aa		13.61	□□□□□ -0.23
ITGA5-208	ENST00000551861	DOCK2	Q92608	1830 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	TRIM75P	A6NK02	468 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	NPM3	O75607	178 aa	Known RBP	13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	BCR	P11274	1271 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	MOGS	Q13724	837 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	GPAT2	Q6NUI2	795 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	ATF7IP	Q6VMQ6	1270 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	SLAIN1	Q8ND83	568 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	DPF3	Q92784	378 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	RNF208	Q9H0X6	261 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	HMG20B	Q9P0W2	317 aa		13.6	□□□□□ -0.23
ITGA5-208	ENST00000551861	ATRNL1	Q5VV63	1379 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	TNPO2	O14787	897 aa	Known RBP	13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	TBC1D12	O60347	775 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	BAG3	O95817	575 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	CTGF	P29279	349 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	MAP3K10	Q02779	954 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	PRKCZ	Q05513	592 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	MTFR1	Q15390	333 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	CCDC158	Q5M9N0	1113 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	SH3BP5L	Q7L8J4	393 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	CLUAP1	Q96AJ1	413 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	NSUN4	Q96CB9	384 aa	Known RBP	13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	HTATIP2	Q9BUP3	242 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	TRIM34	Q9BYJ4	488 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	TBC1D2	Q9BYX2	928 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	DDX4	Q9NQI0	724 aa	Known RBP	13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	ADGRA2	Q96PE1	1338 aa		13.59	□□□□□ -0.23
ITGA5-208	ENST00000551861	GJB1	P08034	283 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	CCL5	P13501	91 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	TRIM27	P14373	513 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	TTC39A	Q5SRH9	613 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	ZKSCAN2	Q63HK3	967 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	TBC1D9	Q6ZT07	1266 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	TEX11	Q8IYF3	940 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	COA7	Q96BR5	231 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	AS3MT	Q9HBK9	375 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	TAOK2	Q9UL54	1235 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	AGTPBP1	Q9UPW5	1226 aa		13.58	□□□□□ -0.24
ITGA5-208	ENST00000551861	ZSWIM8	A7E2V4	1837 aa		13.57	□□□□□ -0.24
ITGA5-208	ENST00000551861	ADCY3	O60266	1144 aa		13.57	□□□□□ -0.24
ITGA5-208	ENST00000551861	PLCG2	P16885	1265 aa		13.57	□□□□□ -0.24
ITGA5-208	ENST00000551861	CAPN2	P17655	700 aa		13.57	□□□□□ -0.24
ITGA5-208	ENST00000551861	ARID4A	P29374	1257 aa	Predicted RBP	13.57	□□□□□ -0.24
ITGA5-208	ENST00000551861	GJA8	P48165	433 aa		13.57	□□□□□ -0.24
ITGA5-208	ENST00000551861	RHBDL3	P58872	404 aa		13.57	□□□□□ -0.24
ITGA5-208	ENST00000551861	ZNF280C	Q8ND82	737 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms