RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 FAM151AQ8WW52 585 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 A0A1B0GUL6 1792 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 MX1P20591 662 aa12.87□□□□□ -0.35
PTCH1-225ENST00000551845 NUCB1Q02818 461 aa12.87□□□□□ -0.35
PTCH1-225ENST00000551845 NBPF12Q5TAG4 269 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-225ENST00000551845 ZSCAN25Q6NSZ9 544 aa12.87□□□□□ -0.35
PTCH1-225ENST00000551845 CERS3Q8IU89 383 aa12.87□□□□□ -0.35
PTCH1-225ENST00000551845 HOOK2Q96ED9 719 aa12.87□□□□□ -0.35
PTCH1-225ENST00000551845 IDI2Q9BXS1 227 aa12.87□□□□□ -0.35
PTCH1-225ENST00000551845 LNPKQ9C0E8 428 aa12.87□□□□□ -0.35
PTCH1-225ENST00000551845 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTCH1-225ENST00000551845 TMEM39BQ9GZU3 492 aa12.87□□□□□ -0.35
PTCH1-225ENST00000551845 AATFQ9NY61 560 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTCH1-225ENST00000551845 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
PTCH1-225ENST00000551845 ENTPD3O75355 529 aa12.86□□□□□ -0.35
PTCH1-225ENST00000551845 TCP10Q12799 353 aa12.86□□□□□ -0.35
PTCH1-225ENST00000551845 NFIAQ12857 509 aa12.86□□□□□ -0.35
PTCH1-225ENST00000551845 PRKG1Q13976 671 aa12.86□□□□□ -0.35
PTCH1-225ENST00000551845 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
PTCH1-225ENST00000551845 EDC3Q96F86 508 aaKnown RBP12.86□□□□□ -0.35
PTCH1-225ENST00000551845 CSRNP1Q96S65 589 aa12.86□□□□□ -0.35
PTCH1-225ENST00000551845 UBE2Q2LH0YL09 131 aa12.85□□□□□ -0.35
PTCH1-225ENST00000551845 RHBDL3P58872 404 aa12.85□□□□□ -0.35
PTCH1-225ENST00000551845 LRRFIP1Q32MZ4 808 aaKnown RBP12.85□□□□□ -0.35
PTCH1-225ENST00000551845 TSHZ3Q63HK5 1081 aa12.85□□□□□ -0.35
PTCH1-225ENST00000551845 ZSCAN29Q8IWY8 852 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-225ENST00000551845 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
PTCH1-225ENST00000551845 FAM198AQ9UFP1 575 aa12.85□□□□□ -0.35
PTCH1-225ENST00000551845 STAP2Q9UGK3 403 aa12.85□□□□□ -0.35
PTCH1-225ENST00000551845 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
PTCH1-225ENST00000551845 PSME4Q14997 1843 aa12.85□□□□□ -0.35
PTCH1-225ENST00000551845 POLR2AP24928 1970 aaKnown RBP12.85□□□□□ -0.35
PTCH1-225ENST00000551845 UNCXA6NJT0 531 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 USP2O75604 605 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-225ENST00000551845 WDHD1O75717 1129 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-225ENST00000551845 SLC10A3P09131 477 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 PDE6AP16499 860 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 IREB2P48200 963 aaKnown RBP12.84□□□□□ -0.35
PTCH1-225ENST00000551845 RGS3P49796 1198 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 PDE1AP54750 535 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 PICALMQ13492 652 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 UBE3CQ15386 1083 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 MOB2Q70IA6 237 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 ADGRA1Q86SQ6 560 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 PI4K2BQ8TCG2 481 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-225ENST00000551845 ZNF532Q9HCE3 1301 aa12.84□□□□□ -0.35
PTCH1-225ENST00000551845 MAGEB6P1A0A0J9YX57 407 aa12.83□□□□□ -0.36
PTCH1-225ENST00000551845 ADD2P35612 726 aa12.83□□□□□ -0.36
PTCH1-225ENST00000551845 DYNLL1P63167 89 aaKnown RBP12.83□□□□□ -0.36
PTCH1-225ENST00000551845 PKN2Q16513 984 aaKnown RBP12.83□□□□□ -0.36
PTCH1-225ENST00000551845 MAP3K11Q16584 847 aa12.83□□□□□ -0.36
PTCH1-225ENST00000551845 DCAF15Q66K64 600 aa12.83□□□□□ -0.36
PTCH1-225ENST00000551845 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
PTCH1-225ENST00000551845 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-225ENST00000551845 KBTBD3Q8NAB2 608 aa12.83□□□□□ -0.36
PTCH1-225ENST00000551845 MIGA1Q8NAN2 632 aa12.83□□□□□ -0.36
PTCH1-225ENST00000551845 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.36
PTCH1-225ENST00000551845 SLC10A4Q96EP9 437 aa12.83□□□□□ -0.36
PTCH1-225ENST00000551845 ZFYP08048 801 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-225ENST00000551845 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
PTCH1-225ENST00000551845 LDLRAD1Q5T700 205 aa12.82□□□□□ -0.36
PTCH1-225ENST00000551845 MIGA2Q7L4E1 593 aa12.82□□□□□ -0.36
PTCH1-225ENST00000551845 PLEKHM2Q8IWE5 1019 aa12.82□□□□□ -0.36
PTCH1-225ENST00000551845 ANKRD13AQ8IZ07 590 aa12.82□□□□□ -0.36
PTCH1-225ENST00000551845 EVI5LQ96CN4 794 aa12.82□□□□□ -0.36
PTCH1-225ENST00000551845 DHX36Q9H2U1 1008 aaKnown RBP12.82□□□□□ -0.36
PTCH1-225ENST00000551845 DDX4Q9NQI0 724 aaKnown RBP12.82□□□□□ -0.36
PTCH1-225ENST00000551845 SALL3Q9BXA9 1300 aa12.82□□□□□ -0.36
PTCH1-225ENST00000551845 TCRBV5S4A2TA0A5A2 114 aa12.81□□□□□ -0.36
PTCH1-225ENST00000551845 RNF113AO15541 343 aaKnown RBP12.81□□□□□ -0.36
PTCH1-225ENST00000551845 USP5P45974 858 aa12.81□□□□□ -0.36
PTCH1-225ENST00000551845 CDAN1Q8IWY9 1227 aa12.81□□□□□ -0.36
PTCH1-225ENST00000551845 RIOK1Q9BRS2 568 aaKnown RBP12.81□□□□□ -0.36
PTCH1-225ENST00000551845 ZNF341Q9BYN7 854 aa12.81□□□□□ -0.36
PTCH1-225ENST00000551845 OSBPL5Q9H0X9 879 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-225ENST00000551845 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
PTCH1-225ENST00000551845 FZD1Q9UP38 647 aa12.81□□□□□ -0.36
PTCH1-225ENST00000551845 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
PTCH1-225ENST00000551845 DDTLA6NHG4 134 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-225ENST00000551845 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
PTCH1-225ENST00000551845 TBC1D8O95759 1140 aa12.8□□□□□ -0.36
PTCH1-225ENST00000551845 RASAL3Q86YV0 1011 aa12.8□□□□□ -0.36
PTCH1-225ENST00000551845 FOXP4Q8IVH2 680 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-225ENST00000551845 MAPKAPK5Q8IW41 473 aa12.8□□□□□ -0.36
PTCH1-225ENST00000551845 ZNF296Q8WUU4 475 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-225ENST00000551845 CCDC136Q96JN2 1154 aa12.8□□□□□ -0.36
PTCH1-225ENST00000551845 FSD1Q9BTV5 496 aa12.8□□□□□ -0.36
PTCH1-225ENST00000551845 CRNKL1Q9BZJ0 848 aaKnown RBP12.8□□□□□ -0.36
PTCH1-225ENST00000551845 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-225ENST00000551845 PI4KBQ9UBF8 816 aa12.8□□□□□ -0.36
PTCH1-225ENST00000551845 ZNF646O15015 1829 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-225ENST00000551845 TBC1D12O60347 775 aa12.79□□□□□ -0.36
PTCH1-225ENST00000551845 HABP4Q5JVS0 413 aaKnown RBP12.79□□□□□ -0.36
PTCH1-225ENST00000551845 ERICH6BQ5W0A0 696 aa12.79□□□□□ -0.36
PTCH1-225ENST00000551845 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-225ENST00000551845 SH3BP5LQ7L8J4 393 aa12.79□□□□□ -0.36
PTCH1-225ENST00000551845 TICAM2Q86XR7 235 aa12.79□□□□□ -0.36
PTCH1-225ENST00000551845 APPBP2Q92624 585 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms