RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 MAP3K2Q9Y2U5 619 aa14.49□□□□□ -0.09
GPN3-208ENST00000550974 AFG3L2Q9Y4W6 797 aa14.49□□□□□ -0.09
GPN3-208ENST00000550974 TRIM75PA6NK02 468 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 DDX58O95786 925 aaKnown RBP14.48□□□□□ -0.09
GPN3-208ENST00000550974 IGKV5-2P06315 115 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 ZKSCAN1P17029 563 aaPredicted RBP14.48□□□□□ -0.09
GPN3-208ENST00000550974 PTPRAP18433 802 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 IGFBP4P22692 258 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 HDLBPQ00341 1268 aaKnown RBP14.48□□□□□ -0.09
GPN3-208ENST00000550974 LMOD3Q0VAK6 560 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 UBE3BQ7Z3V4 1068 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 FAM151AQ8WW52 585 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 ZDHHC15Q96MV8 337 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 PNMA3Q9UL41 463 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 AGTPBP1Q9UPW5 1226 aa14.48□□□□□ -0.09
GPN3-208ENST00000550974 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.47□□□□□ -0.09
GPN3-208ENST00000550974 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.47□□□□□ -0.09
GPN3-208ENST00000550974 ANKRD18BA2A2Z9 1011 aa14.47□□□□□ -0.09
GPN3-208ENST00000550974 GYG1P46976 350 aa14.47□□□□□ -0.09
GPN3-208ENST00000550974 CWF19L2Q2TBE0 894 aaKnown RBP14.47□□□□□ -0.09
GPN3-208ENST00000550974 TREML2Q5T2D2 321 aa14.47□□□□□ -0.09
GPN3-208ENST00000550974 APOBEC3HQ6NTF7 200 aaKnown RBP14.47□□□□□ -0.09
GPN3-208ENST00000550974 SCYL3Q8IZE3 742 aa14.47□□□□□ -0.09
GPN3-208ENST00000550974 NUDT12Q9BQG2 462 aa14.47□□□□□ -0.09
GPN3-208ENST00000550974 TSPYL2Q9H2G4 693 aaPredicted RBP14.47□□□□□ -0.09
GPN3-208ENST00000550974 C11orf16Q9NQ32 467 aa14.47□□□□□ -0.09
GPN3-208ENST00000550974 MYH3P11055 1940 aa14.47□□□□□ -0.09
GPN3-208ENST00000550974 GPR37L1O60883 481 aa14.46□□□□□ -0.09
GPN3-208ENST00000550974 HIBADHP31937 336 aaKnown RBP14.46□□□□□ -0.09
GPN3-208ENST00000550974 GCLCP48506 637 aaPredicted RBP14.46□□□□□ -0.09
GPN3-208ENST00000550974 KCNQ1P51787 676 aa14.46□□□□□ -0.09
GPN3-208ENST00000550974 TFF2Q03403 129 aa14.46□□□□□ -0.09
GPN3-208ENST00000550974 CHAF1AQ13111 956 aaPredicted RBP14.46□□□□□ -0.09
GPN3-208ENST00000550974 SH3RF1Q7Z6J0 888 aa14.46□□□□□ -0.09
GPN3-208ENST00000550974 TCF20Q9UGU0 1960 aaKnown RBP14.45□□□□□ -0.1
GPN3-208ENST00000550974 H7C1W4 665 aa14.45□□□□□ -0.1
GPN3-208ENST00000550974 CSF1RP07333 972 aa14.45□□□□□ -0.1
GPN3-208ENST00000550974 XRCC5P13010 732 aaKnown RBP14.45□□□□□ -0.1
GPN3-208ENST00000550974 EPHB4P54760 987 aa14.45□□□□□ -0.1
GPN3-208ENST00000550974 ADGRE1Q14246 886 aa14.45□□□□□ -0.1
GPN3-208ENST00000550974 CCL14Q16627 93 aa14.45□□□□□ -0.1
GPN3-208ENST00000550974 TRMT44Q8IYL2 757 aaKnown RBP14.45□□□□□ -0.1
GPN3-208ENST00000550974 CXXC1Q9P0U4 656 aaPredicted RBP14.45□□□□□ -0.1
GPN3-208ENST00000550974 TRIM43BA6NCK2 446 aa14.44□□□□□ -0.1
GPN3-208ENST00000550974 DNM1LO00429 736 aa14.44□□□□□ -0.1
GPN3-208ENST00000550974 TMPOP42166 694 aaKnown RBP14.44□□□□□ -0.1
GPN3-208ENST00000550974 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
GPN3-208ENST00000550974 TRIM60Q495X7 471 aa14.44□□□□□ -0.1
GPN3-208ENST00000550974 SLC39A5Q6ZMH5 540 aa14.44□□□□□ -0.1
GPN3-208ENST00000550974 SOCS4Q8WXH5 440 aa14.44□□□□□ -0.1
GPN3-208ENST00000550974 TRIM43Q96BQ3 446 aaPredicted RBP14.44□□□□□ -0.1
GPN3-208ENST00000550974 PDLIM7Q9NR12 457 aa14.44□□□□□ -0.1
GPN3-208ENST00000550974 IQSEC3Q9UPP2 1182 aaPredicted RBP14.44□□□□□ -0.1
GPN3-208ENST00000550974 SMIM22K7EJ46 135 aa14.43□□□□□ -0.1
GPN3-208ENST00000550974 NEXNQ0ZGT2 675 aa14.43□□□□□ -0.1
GPN3-208ENST00000550974 AAK1Q2M2I8 961 aa14.43□□□□□ -0.1
GPN3-208ENST00000550974 CCDC84Q86UT8 332 aaPredicted RBP14.43□□□□□ -0.1
GPN3-208ENST00000550974 FAM84BQ96KN1 310 aaPredicted RBP14.43□□□□□ -0.1
GPN3-208ENST00000550974 PLA2G12BQ9BX93 195 aa14.43□□□□□ -0.1
GPN3-208ENST00000550974 PLXNB2O15031 1838 aa14.43□□□□□ -0.1
GPN3-208ENST00000550974 PIEZO1Q92508 2521 aa14.42□□□□□ -0.1
GPN3-208ENST00000550974 PI4KAP2A4QPH2 592 aa14.42□□□□□ -0.1
GPN3-208ENST00000550974 NEURL1BA8MQ27 555 aa14.42□□□□□ -0.1
GPN3-208ENST00000550974 PHF20L1A8MW92 1017 aa14.42□□□□□ -0.1
GPN3-208ENST00000550974 ELL2O00472 640 aaPredicted RBP14.42□□□□□ -0.1
GPN3-208ENST00000550974 CNGA1P29973 690 aa14.42□□□□□ -0.1
GPN3-208ENST00000550974 IFIT5Q13325 482 aaKnown RBP14.42□□□□□ -0.1
GPN3-208ENST00000550974 CCDC129Q6ZRS4 1044 aa14.42□□□□□ -0.1
GPN3-208ENST00000550974 PI4KAP1Q8N8J0 262 aa14.42□□□□□ -0.1
GPN3-208ENST00000550974 LPAR1Q92633 364 aa14.42□□□□□ -0.1
GPN3-208ENST00000550974 KHSRPQ92945 711 aaKnown RBP eCLIP14.42□□□□□ -0.1
GPN3-208ENST00000550974 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.42□□□□□ -0.1
GPN3-208ENST00000550974 DDX20Q9UHI6 824 aaKnown RBP14.42□□□□□ -0.1
GPN3-208ENST00000550974 AK9Q5TCS8 1911 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 FRAT2O75474 233 aaPredicted RBP14.41□□□□□ -0.1
GPN3-208ENST00000550974 ITGB8P26012 769 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 PBX2P40425 430 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 NHLH1Q02575 133 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 NFIAQ12857 509 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 GJC2Q5T442 439 aaPredicted RBP14.41□□□□□ -0.1
GPN3-208ENST00000550974 KSR2Q6VAB6 950 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 MICALL1Q8N3F8 863 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 TBC1D22AQ8WUA7 517 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 MRIQ9BWK5 157 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 CHMP3Q9Y3E7 222 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 DAGLAQ9Y4D2 1042 aa14.41□□□□□ -0.1
GPN3-208ENST00000550974 LRRFIP2Q9Y608 721 aaKnown RBP14.41□□□□□ -0.1
GPN3-208ENST00000550974 PEX10O60683 326 aa14.4□□□□□ -0.1
GPN3-208ENST00000550974 SKIV2LQ15477 1246 aaKnown RBP14.4□□□□□ -0.1
GPN3-208ENST00000550974 ASCC2Q9H1I8 757 aaPredicted RBP14.4□□□□□ -0.1
GPN3-208ENST00000550974 CNNM1Q9NRU3 951 aa14.4□□□□□ -0.1
GPN3-208ENST00000550974 BDP1A6H8Y1 2624 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 MUC6Q6W4X9 2439 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
GPN3-208ENST00000550974 RGS2P41220 211 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 PABPC4Q13310 644 aaKnown RBP eCLIP14.39□□□□□ -0.11
GPN3-208ENST00000550974 HHIPL2Q6UWX4 724 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 LDHAL6AQ6ZMR3 332 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 VPS37DQ86XT2 251 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 ZFPM1Q8IX07 1006 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms