RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 NFKBIBQ15653 356 aa14.8□□□□□ -0.04
CACNB3-217ENST00000550483 TBC1D10CQ8IV04 446 aa14.8□□□□□ -0.04
CACNB3-217ENST00000550483 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
CACNB3-217ENST00000550483 ESR2Q92731 530 aa14.8□□□□□ -0.04
CACNB3-217ENST00000550483 GTF3C6Q969F1 213 aa14.8□□□□□ -0.04
CACNB3-217ENST00000550483 ZNF287Q9HBT7 754 aa14.8□□□□□ -0.04
CACNB3-217ENST00000550483 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
CACNB3-217ENST00000550483 AATFQ9NY61 560 aaKnown RBP eCLIP14.8□□□□□ -0.04
CACNB3-217ENST00000550483 PIM2Q9P1W9 311 aa14.8□□□□□ -0.04
CACNB3-217ENST00000550483 ANGEL1Q9UNK9 670 aaKnown RBP14.8□□□□□ -0.04
CACNB3-217ENST00000550483 MYO3BQ8WXR4 1341 aa14.8□□□□□ -0.04
CACNB3-217ENST00000550483 ERICH2A1L162 156 aa14.79□□□□□ -0.04
CACNB3-217ENST00000550483 PRKAB2O43741 272 aa14.79□□□□□ -0.04
CACNB3-217ENST00000550483 FGRP09769 529 aa14.79□□□□□ -0.04
CACNB3-217ENST00000550483 HHIPL2Q6UWX4 724 aa14.79□□□□□ -0.04
CACNB3-217ENST00000550483 CCDC83Q8IWF9 413 aa14.79□□□□□ -0.04
CACNB3-217ENST00000550483 RBM46Q8TBY0 533 aaKnown RBP14.79□□□□□ -0.04
CACNB3-217ENST00000550483 DCP1AQ9NPI6 582 aaPredicted RBP14.79□□□□□ -0.04
CACNB3-217ENST00000550483 ATP6V1DQ9Y5K8 247 aa14.79□□□□□ -0.04
CACNB3-217ENST00000550483 SLX4Q8IY92 1834 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 ROBO3Q96MS0 1386 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 ORC4O43929 436 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 DPEP1P16444 411 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 USP5P45974 858 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 DYNLL1P63167 89 aaKnown RBP14.78□□□□□ -0.04
CACNB3-217ENST00000550483 PDE4BQ07343 736 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 CCDC178Q5BJE1 867 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 C9orf131Q5VYM1 1079 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 SDR42E1Q8WUS8 393 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 NBPF3Q9H094 633 aa14.78□□□□□ -0.04
CACNB3-217ENST00000550483 USP17L3A6NCW0 530 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 USP17L4A6NCW7 530 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 ECE2O60344 883 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 BRD1O95696 1058 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 BTDP43251 543 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 MMP14P50281 582 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 PPP2R5BQ15173 497 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 CTR9Q6PD62 1173 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 CPLX2Q6PUV4 134 aaKnown RBP14.77□□□□□ -0.05
CACNB3-217ENST00000550483 USP17L1Q7RTZ2 530 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 SGMS1Q86VZ5 419 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 TNPO1Q92973 898 aaKnown RBP14.77□□□□□ -0.05
CACNB3-217ENST00000550483 TCEANC2Q96MN5 208 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 RRAGCQ9HB90 399 aa14.77□□□□□ -0.05
CACNB3-217ENST00000550483 NEDD4P46934 1319 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 MINDY4BA8MYZ0 360 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 B4E1Z4 1266 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 SH2B2O14492 632 aaPredicted RBP14.76□□□□□ -0.05
CACNB3-217ENST00000550483 PPIP5K2O43314 1243 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 CDKL5O76039 1030 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 LARGE1O95461 756 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 ANTXR2P58335 489 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 DALRD3Q5D0E6 543 aaKnown RBP14.76□□□□□ -0.05
CACNB3-217ENST00000550483 SYNE3Q6ZMZ3 975 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 SLC51AQ86UW1 340 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 IQCA1Q86XH1 822 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 TEKT1Q969V4 418 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 UBAC1Q9BSL1 405 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 MKRN1Q9UHC7 482 aaKnown RBP14.76□□□□□ -0.05
CACNB3-217ENST00000550483 JAG2Q9Y219 1238 aa14.76□□□□□ -0.05
CACNB3-217ENST00000550483 NID2Q14112 1375 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 USP17L12C9JPN9 530 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 USP17L21D6R901 530 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 C21orf2O43822 256 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 KCNA3P22001 575 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 GJB2P29033 226 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 PDIA3P30101 505 aaKnown RBP14.75□□□□□ -0.05
CACNB3-217ENST00000550483 MCM4P33991 863 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 CTDSPL2Q05D32 466 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 DIXDC1Q155Q3 683 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 DOK7Q18PE1 504 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 TEX11Q8IYF3 940 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 FBXW7Q969H0 707 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 TOMM22Q9NS69 142 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 MCM9Q9NXL9 1143 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 TTF2Q9UNY4 1162 aaKnown RBP14.75□□□□□ -0.05
CACNB3-217ENST00000550483 LAMB1P07942 1786 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 WDR90Q96KV7 1748 aa14.75□□□□□ -0.05
CACNB3-217ENST00000550483 KLF18A0A0U1RQI7 1052 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 IFIT3O14879 490 aaKnown RBP14.74□□□□□ -0.05
CACNB3-217ENST00000550483 STX6O43752 255 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 KDM4AO75164 1064 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
CACNB3-217ENST00000550483 APOBRQ0VD83 1088 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 TMEM67Q5HYA8 995 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 DACT2Q5SW24 774 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 C12orf60Q5U649 245 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 OLFM4Q6UX06 510 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 SMARCC2Q8TAQ2 1214 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 SH3RF3Q8TEJ3 882 aaPredicted RBP14.74□□□□□ -0.05
CACNB3-217ENST00000550483 DBNDD1Q9H9R9 158 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 ZSWIM5Q9P217 1185 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 SERPINA10Q9UK55 444 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.74□□□□□ -0.05
CACNB3-217ENST00000550483 DAGLAQ9Y4D2 1042 aa14.74□□□□□ -0.05
CACNB3-217ENST00000550483 CCDC196A0A1B0GTZ2 297 aa14.73□□□□□ -0.05
CACNB3-217ENST00000550483 CCDC69A6NI79 296 aa14.73□□□□□ -0.05
CACNB3-217ENST00000550483 GOLGA8BA8MQT2 603 aa14.73□□□□□ -0.05
CACNB3-217ENST00000550483 RHBDL3P58872 404 aa14.73□□□□□ -0.05
CACNB3-217ENST00000550483 ST3GAL1Q11201 340 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms