RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 DTHD1Q6ZMT9 781 aa5.37□□□□□ -1.55
CCNT1-203ENST00000550457 TMC1Q8TDI8 760 aa5.37□□□□□ -1.55
CCNT1-203ENST00000550457 KCNB2Q92953 911 aa5.37□□□□□ -1.55
CCNT1-203ENST00000550457 ISL2Q96A47 359 aa5.37□□□□□ -1.55
CCNT1-203ENST00000550457 RC3H2Q9HBD1 1191 aaKnown RBP5.37□□□□□ -1.55
CCNT1-203ENST00000550457 TMEM39AQ9NV64 488 aa5.37□□□□□ -1.55
CCNT1-203ENST00000550457 VAV3Q9UKW4 847 aa5.37□□□□□ -1.55
CCNT1-203ENST00000550457 PRKCQQ04759 706 aa5.36□□□□□ -1.55
CCNT1-203ENST00000550457 ZC3H12AQ5D1E8 599 aaKnown RBP5.36□□□□□ -1.55
CCNT1-203ENST00000550457 ATG4DQ86TL0 474 aaPredicted RBP5.36□□□□□ -1.55
CCNT1-203ENST00000550457 LRRN4CLQ8ND94 238 aa5.36□□□□□ -1.55
CCNT1-203ENST00000550457 ALKBH8Q96BT7 664 aaKnown RBP5.36□□□□□ -1.55
CCNT1-203ENST00000550457 GPN3Q9UHW5 284 aaPredicted RBP5.36□□□□□ -1.55
CCNT1-203ENST00000550457 PCOLCE2Q9UKZ9 415 aa5.36□□□□□ -1.55
CCNT1-203ENST00000550457 BIN1O00499 593 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 CEACAM5P06731 702 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 ZNF124Q15973 351 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 IFI16Q16666 785 aaKnown RBP5.35□□□□□ -1.55
CCNT1-203ENST00000550457 AOC3Q16853 763 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 MPRIPQ6WCQ1 1025 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 FAM214BQ7L5A3 538 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 SULF2Q8IWU5 870 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 TOP6BLQ8N6T0 577 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 FAM168AQ92567 244 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 HEXIM2Q96MH2 286 aaKnown RBP5.35□□□□□ -1.55
CCNT1-203ENST00000550457 RBCK1Q9BYM8 510 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 BCO2Q9BYV7 579 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 MKNK2Q9HBH9 465 aa5.35□□□□□ -1.55
CCNT1-203ENST00000550457 ARNTP27540 789 aa5.34□□□□□ -1.55
CCNT1-203ENST00000550457 PPP2R3AQ06190 1150 aa5.34□□□□□ -1.55
CCNT1-203ENST00000550457 ZNF252P-AS1Q0IIN9 211 aa5.34□□□□□ -1.55
CCNT1-203ENST00000550457 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
CCNT1-203ENST00000550457 UBE3DQ7Z6J8 389 aa5.34□□□□□ -1.55
CCNT1-203ENST00000550457 PI4K2BQ8TCG2 481 aa5.34□□□□□ -1.55
CCNT1-203ENST00000550457 GPBAR1Q8TDU6 330 aa5.34□□□□□ -1.55
CCNT1-203ENST00000550457 DMRTB1Q96MA1 342 aa5.34□□□□□ -1.55
CCNT1-203ENST00000550457 CACNA2D2Q9NY47 1150 aa5.34□□□□□ -1.55
CCNT1-203ENST00000550457 ITIH2P19823 946 aa5.33□□□□□ -1.56
CCNT1-203ENST00000550457 NTF4P34130 210 aa5.33□□□□□ -1.56
CCNT1-203ENST00000550457 ERVK-24P63145 666 aa5.33□□□□□ -1.56
CCNT1-203ENST00000550457 MAP1SQ66K74 1059 aaPredicted RBP5.33□□□□□ -1.56
CCNT1-203ENST00000550457 TMC7Q7Z402 723 aa5.33□□□□□ -1.56
CCNT1-203ENST00000550457 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.33□□□□□ -1.56
CCNT1-203ENST00000550457 RNF214Q8ND24 703 aa5.33□□□□□ -1.56
CCNT1-203ENST00000550457 HRASLS5Q96KN8 279 aa5.33□□□□□ -1.56
CCNT1-203ENST00000550457 TNKS2Q9H2K2 1166 aa5.33□□□□□ -1.56
CCNT1-203ENST00000550457 PRDM7Q9NQW5 492 aa5.33□□□□□ -1.56
CCNT1-203ENST00000550457 TMEM265A0A087WTH1 108 aa5.32□□□□□ -1.56
CCNT1-203ENST00000550457 XRCC5P13010 732 aaKnown RBP5.32□□□□□ -1.56
CCNT1-203ENST00000550457 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.32□□□□□ -1.56
CCNT1-203ENST00000550457 NXPE4Q6UWF7 544 aa5.32□□□□□ -1.56
CCNT1-203ENST00000550457 C3orf58Q8NDZ4 430 aa5.32□□□□□ -1.56
CCNT1-203ENST00000550457 GRIN3AQ8TCU5 1115 aa5.32□□□□□ -1.56
CCNT1-203ENST00000550457 SSU72Q9NP77 194 aaKnown RBP5.32□□□□□ -1.56
CCNT1-203ENST00000550457 NLRP2Q9NX02 1062 aa5.32□□□□□ -1.56
CCNT1-203ENST00000550457 AKAP2Q9Y2D5 859 aa5.32□□□□□ -1.56
CCNT1-203ENST00000550457 NME2P22392 152 aa5.31□□□□□ -1.56
CCNT1-203ENST00000550457 DSC3Q14574 896 aa5.31□□□□□ -1.56
CCNT1-203ENST00000550457 PPM1JQ5JR12 505 aa5.31□□□□□ -1.56
CCNT1-203ENST00000550457 ARHGAP27Q6ZUM4 889 aa5.31□□□□□ -1.56
CCNT1-203ENST00000550457 TMEM40Q8WWA1 233 aa5.31□□□□□ -1.56
CCNT1-203ENST00000550457 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCNT1-203ENST00000550457 CSADQ9Y600 493 aa5.31□□□□□ -1.56
CCNT1-203ENST00000550457 SOWAHDA6NJG2 315 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 PAGE1O75459 146 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 FARP2O94887 1054 aaPredicted RBP5.3□□□□□ -1.56
CCNT1-203ENST00000550457 BMP6P22004 513 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 RASIP1Q5U651 963 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 ANGEL2Q5VTE6 544 aaKnown RBP5.3□□□□□ -1.56
CCNT1-203ENST00000550457 SLC23A3Q6PIS1 610 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 SPACA3Q8IXA5 215 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 RETREG2Q8NC44 543 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 FLAD1Q8NFF5 587 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 NECAB3Q96P71 396 aaPredicted RBP5.3□□□□□ -1.56
CCNT1-203ENST00000550457 PPP4R2Q9NY27 417 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 SNX11Q9Y5W9 270 aa5.3□□□□□ -1.56
CCNT1-203ENST00000550457 PNMA6FA0A0J9YX94 578 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 DBX1A6NMT0 343 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 DCDC2CA8MYV0 355 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 ENC1O14682 589 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 HNRNPUQ00839 825 aaKnown RBP eCLIP5.29□□□□□ -1.56
CCNT1-203ENST00000550457 RING1Q06587 406 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 MESP2Q0VG99 397 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 ENOX2Q16206 610 aaKnown RBP5.29□□□□□ -1.56
CCNT1-203ENST00000550457 NKPD1Q17RQ9 610 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 SPOCD1Q6ZMY3 1216 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 EMILIN2Q9BXX0 1053 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 CBX8Q9HC52 389 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 PRDM10Q9NQV6 1147 aa5.29□□□□□ -1.56
CCNT1-203ENST00000550457 ZNF503-AS2A6NEH8 195 aa5.28□□□□□ -1.56
CCNT1-203ENST00000550457 IGF2BP3O00425 579 aaKnown RBP eCLIP5.28□□□□□ -1.56
CCNT1-203ENST00000550457 EOMESO95936 686 aa5.28□□□□□ -1.56
CCNT1-203ENST00000550457 IKZF1Q13422 519 aa5.28□□□□□ -1.56
CCNT1-203ENST00000550457 TPTE2Q6XPS3 522 aa5.28□□□□□ -1.56
CCNT1-203ENST00000550457 C12orf40Q86WS4 652 aa5.28□□□□□ -1.56
CCNT1-203ENST00000550457 CCER1Q8TC90 406 aaPredicted RBP5.28□□□□□ -1.56
CCNT1-203ENST00000550457 ACSBG1Q96GR2 724 aa5.28□□□□□ -1.56
CCNT1-203ENST00000550457 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.27□□□□□ -1.57
CCNT1-203ENST00000550457 RBAK-RBAKDNI3L0D1 243 aa5.27□□□□□ -1.57
CCNT1-203ENST00000550457 TREHO43280 583 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms