RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 RIPOR2Q9Y4F9 1068 aa9.6□□□□□ -0.87
NEK3-201ENST00000550331 PCDHAC2Q9Y5I4 1007 aa9.6□□□□□ -0.87
NEK3-201ENST00000550331 EN2P19622 333 aaPredicted RBP9.59□□□□□ -0.87
NEK3-201ENST00000550331 GYG1P46976 350 aa9.59□□□□□ -0.87
NEK3-201ENST00000550331 IREB2P48200 963 aaKnown RBP9.59□□□□□ -0.87
NEK3-201ENST00000550331 RASA3Q14644 834 aa9.59□□□□□ -0.87
NEK3-201ENST00000550331 PKDCCQ504Y2 493 aa9.59□□□□□ -0.87
NEK3-201ENST00000550331 PPP1R15BQ5SWA1 713 aa9.59□□□□□ -0.87
NEK3-201ENST00000550331 WNK4Q96J92 1243 aa9.59□□□□□ -0.87
NEK3-201ENST00000550331 FAM84BQ96KN1 310 aaPredicted RBP9.59□□□□□ -0.87
NEK3-201ENST00000550331 TTF2Q9UNY4 1162 aaKnown RBP9.59□□□□□ -0.87
NEK3-201ENST00000550331 FZD1Q9UP38 647 aa9.59□□□□□ -0.87
NEK3-201ENST00000550331 JAG2Q9Y219 1238 aa9.59□□□□□ -0.87
NEK3-201ENST00000550331 SZT2Q5T011 3432 aa9.59□□□□□ -0.87
NEK3-201ENST00000550331 AOX1Q06278 1338 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 CACNA1FO60840 1977 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 DGAT1O75907 488 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 HDLBPQ00341 1268 aaKnown RBP9.58□□□□□ -0.88
NEK3-201ENST00000550331 NBPF12Q5TAG4 269 aaPredicted RBP9.58□□□□□ -0.88
NEK3-201ENST00000550331 ANKRD13AQ8IZ07 590 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 VGLL2Q8N8G2 317 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 CD99L2Q8TCZ2 262 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 ERO1AQ96HE7 468 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 CLMNQ96JQ2 1002 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 PUS3Q9BZE2 481 aaKnown RBP9.58□□□□□ -0.88
NEK3-201ENST00000550331 BICC1Q9H694 974 aaKnown RBP9.58□□□□□ -0.88
NEK3-201ENST00000550331 PTPN22Q9Y2R2 807 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 ECM29Q5VYK3 1845 aa9.58□□□□□ -0.88
NEK3-201ENST00000550331 KIF16BQ96L93 1317 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 E9PSI1 815 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 USP2O75604 605 aaPredicted RBP9.57□□□□□ -0.88
NEK3-201ENST00000550331 TNNI2P48788 182 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 CAVIN4Q5BKX8 364 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 METTL24Q5JXM2 366 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 FBXO33Q7Z6M2 555 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 VPS37DQ86XT2 251 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 DZIP1LQ8IYY4 767 aaKnown RBP9.57□□□□□ -0.88
NEK3-201ENST00000550331 ANKRD44Q8N8A2 993 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 TBC1D22AQ8WUA7 517 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 ARMC5Q96C12 935 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 EFCC1Q9HA90 598 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 ZNF70Q9UC06 446 aaPredicted RBP9.57□□□□□ -0.88
NEK3-201ENST00000550331 PCDHGA10Q9Y5H3 936 aa9.57□□□□□ -0.88
NEK3-201ENST00000550331 TESPA1A2RU30 521 aaPredicted RBP9.56□□□□□ -0.88
NEK3-201ENST00000550331 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
NEK3-201ENST00000550331 PDE8BO95263 885 aa9.56□□□□□ -0.88
NEK3-201ENST00000550331 CRKP46108 304 aa9.56□□□□□ -0.88
NEK3-201ENST00000550331 PPP4CP60510 307 aa9.56□□□□□ -0.88
NEK3-201ENST00000550331 LRRC24Q50LG9 513 aa9.56□□□□□ -0.88
NEK3-201ENST00000550331 OTUD7BQ6GQQ9 843 aa9.56□□□□□ -0.88
NEK3-201ENST00000550331 TEPSINQ96N21 525 aa9.56□□□□□ -0.88
NEK3-201ENST00000550331 MTRQ99707 1265 aa9.56□□□□□ -0.88
NEK3-201ENST00000550331 TDRD3Q9H7E2 651 aaKnown RBP9.56□□□□□ -0.88
NEK3-201ENST00000550331 ARAP2Q8WZ64 1704 aa9.56□□□□□ -0.88
NEK3-201ENST00000550331 MAST3O60307 1309 aa9.56□□□□□ -0.88
NEK3-201ENST00000550331 FRAT2O75474 233 aaPredicted RBP9.55□□□□□ -0.88
NEK3-201ENST00000550331 GJA5P36382 358 aa9.55□□□□□ -0.88
NEK3-201ENST00000550331 CRHR2Q13324 411 aa9.55□□□□□ -0.88
NEK3-201ENST00000550331 PUM3Q15397 648 aaKnown RBP9.55□□□□□ -0.88
NEK3-201ENST00000550331 ALDH1L2Q3SY69 923 aa9.55□□□□□ -0.88
NEK3-201ENST00000550331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.55□□□□□ -0.88
NEK3-201ENST00000550331 SSH1Q8WYL5 1049 aa9.55□□□□□ -0.88
NEK3-201ENST00000550331 TEKT1Q969V4 418 aa9.55□□□□□ -0.88
NEK3-201ENST00000550331 OPTNQ96CV9 577 aa9.55□□□□□ -0.88
NEK3-201ENST00000550331 MRIQ9BWK5 157 aa9.55□□□□□ -0.88
NEK3-201ENST00000550331 USP44Q9H0E7 712 aa9.55□□□□□ -0.88
NEK3-201ENST00000550331 SUGT1Q9Y2Z0 365 aa9.55□□□□□ -0.88
NEK3-201ENST00000550331 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 TCP10L2B9ZVM9 353 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 H0YGN5 161 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 IFIT1P09914 478 aaKnown RBP9.54□□□□□ -0.88
NEK3-201ENST00000550331 FGFR2P21802 821 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 SP3Q02447 781 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 SLFN5Q08AF3 891 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 CHAF1AQ13111 956 aaPredicted RBP9.54□□□□□ -0.88
NEK3-201ENST00000550331 VGLL4Q14135 290 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 GRIK5Q16478 980 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 FKBP1CQ5VVH2 108 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.54□□□□□ -0.88
NEK3-201ENST00000550331 KLHDC4Q8TBB5 520 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 HOOK2Q96ED9 719 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 ZNF333Q96JL9 665 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 ZDHHC15Q96MV8 337 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 TMEM39BQ9GZU3 492 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 CRISPLD2Q9H0B8 497 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 ELP3Q9H9T3 547 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 TMOD2Q9NZR1 351 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 IQSEC3Q9UPP2 1182 aaPredicted RBP9.54□□□□□ -0.88
NEK3-201ENST00000550331 CSADQ9Y600 493 aa9.54□□□□□ -0.88
NEK3-201ENST00000550331 RPAP1Q9BWH6 1393 aaPredicted RBP9.53□□□□□ -0.88
NEK3-201ENST00000550331 TRIM6-TRIM34B2RNG4 842 aa9.53□□□□□ -0.88
NEK3-201ENST00000550331 EYA2O00167 538 aa9.53□□□□□ -0.88
NEK3-201ENST00000550331 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
NEK3-201ENST00000550331 SLC4A8Q2Y0W8 1093 aa9.53□□□□□ -0.88
NEK3-201ENST00000550331 SLC9C1Q4G0N8 1177 aa9.53□□□□□ -0.88
NEK3-201ENST00000550331 TYW1BQ6NUM6 668 aa9.53□□□□□ -0.88
NEK3-201ENST00000550331 TRIM67Q6ZTA4 783 aa9.53□□□□□ -0.88
NEK3-201ENST00000550331 NBPF11Q86T75 865 aa9.53□□□□□ -0.88
NEK3-201ENST00000550331 FAM83AQ86UY5 434 aa9.53□□□□□ -0.88
NEK3-201ENST00000550331 LPIN2Q92539 896 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms