RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	HHIPL1	Q96JK4	782 aa		13.66	□□□□□ -0.22
RAB5B-208	ENST00000550283	LNPK	Q9C0E8	428 aa		13.66	□□□□□ -0.22
RAB5B-208	ENST00000550283	PAG1	Q9NWQ8	432 aa		13.66	□□□□□ -0.22
RAB5B-208	ENST00000550283	SIPA1L1	O43166	1804 aa		13.66	□□□□□ -0.22
RAB5B-208	ENST00000550283	CDK5RAP2	Q96SN8	1893 aa		13.65	□□□□□ -0.22
RAB5B-208	ENST00000550283	PPP4C	P60510	307 aa		13.65	□□□□□ -0.22
RAB5B-208	ENST00000550283	TNFAIP1	Q13829	316 aa		13.65	□□□□□ -0.22
RAB5B-208	ENST00000550283	RIOK1	Q9BRS2	568 aa	Known RBP	13.65	□□□□□ -0.22
RAB5B-208	ENST00000550283	RNF39	Q9H2S5	420 aa		13.65	□□□□□ -0.22
RAB5B-208	ENST00000550283	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.65	□□□□□ -0.22
RAB5B-208	ENST00000550283	ZNF532	Q9HCE3	1301 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	SMIM22	K7EJ46	135 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	PDE4A	P27815	886 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	INPP5B	P32019	993 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	TNNI2	P48788	182 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	FKBP1B	P68106	108 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	GSTO1	P78417	241 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	KIF23	Q02241	960 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	RRP1B	Q14684	758 aa	Known RBP	13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	SLC4A8	Q2Y0W8	1093 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	SUPT20HL1	Q3ZLR7	823 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	SLC9C2	Q5TAH2	1124 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	MAPKAPK5	Q8IW41	473 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	TEX11	Q8IYF3	940 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	TMOD2	Q9NZR1	351 aa		13.64	□□□□□ -0.23
RAB5B-208	ENST00000550283	FOXN1	O15353	648 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	ENTPD3	O75355	529 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	LDHC	P07864	332 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	NF2	P35240	595 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	ADD2	P35612	726 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	AAMP	Q13685	434 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	VGLL4	Q14135	290 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	ARMC9	Q7Z3E5	817 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	SKAP1	Q86WV1	359 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	LCORL	Q8N3X6	602 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	TGFBRAP1	Q8WUH2	860 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	GCC1	Q96CN9	775 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	RWDD1	Q9H446	243 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	ELP3	Q9H9T3	547 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	WBP1L	Q9NX94	342 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	TSKS	Q9UJT2	592 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	SNCAIP	Q9Y6H5	919 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	FLT1	P17948	1338 aa		13.63	□□□□□ -0.23
RAB5B-208	ENST00000550283	PHF20L1	A8MW92	1017 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	PRKAB2	O43741	272 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	MX1	P20591	662 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	PDE1A	P54750	535 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	JAG1	P78504	1218 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	NUCB1	Q02818	461 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	MAP3K12	Q12852	859 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	SLF2	Q8IX21	1173 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	CSRNP1	Q96S65	589 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	STAP2	Q9UGK3	403 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	SAP30BP	Q9UHR5	308 aa	Known RBP	13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	FOCAD	Q5VW36	1801 aa		13.62	□□□□□ -0.23
RAB5B-208	ENST00000550283	ECE1	P42892	770 aa		13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	SPRYD7	Q5W111	196 aa		13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	CCDC84	Q86UT8	332 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	CHD1L	Q86WJ1	897 aa		13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	WRNIP1	Q96S55	665 aa		13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	PUS7L	Q9H0K6	701 aa	Known RBP	13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	DNAJC18	Q9H819	358 aa		13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	ARMT1	Q9H993	441 aa		13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	ZNF112	Q9UJU3	913 aa		13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	PALD1	Q9ULE6	856 aa		13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	DDX60L	Q5H9U9	1706 aa	Known RBP	13.61	□□□□□ -0.23
RAB5B-208	ENST00000550283	PPP1R12B	O60237	982 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	MAP3K9	P80192	1104 aa		13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	MAP3K10	Q02779	954 aa		13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	TTF1	Q15361	905 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	PLEKHM2	Q8IWE5	1019 aa		13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	KBTBD3	Q8NAB2	608 aa		13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	SDR42E1	Q8WUS8	393 aa		13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	WNK4	Q96J92	1243 aa		13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	SEC62	Q99442	399 aa	Known RBP	13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	TTC41P	Q6P2S7	1318 aa		13.6	□□□□□ -0.23
RAB5B-208	ENST00000550283	MAGEB6P1	A0A0J9YX57	407 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283		M0R2C6	588 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	MBD4	O95243	580 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	CYP2D6	P10635	497 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	MAP2K2	P36507	400 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	IREB2	P48200	963 aa	Known RBP	13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	NOG	Q13253	232 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	ANKRD13A	Q8IZ07	590 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	OSBP2	Q969R2	916 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	CCDC102A	Q96A19	550 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	SLC10A4	Q96EP9	437 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	R3HDML	Q9H3Y0	253 aa		13.59	□□□□□ -0.23
RAB5B-208	ENST00000550283	BAG3	O95817	575 aa		13.58	□□□□□ -0.24
RAB5B-208	ENST00000550283	OPTN	Q96CV9	577 aa		13.58	□□□□□ -0.24
RAB5B-208	ENST00000550283	PTPN18	Q99952	460 aa		13.58	□□□□□ -0.24
RAB5B-208	ENST00000550283	ZNF341	Q9BYN7	854 aa		13.58	□□□□□ -0.24
RAB5B-208	ENST00000550283	COL2A1	P02458	1487 aa	Predicted RBP	13.58	□□□□□ -0.24
RAB5B-208	ENST00000550283	MYH7	P12883	1935 aa		13.58	□□□□□ -0.24

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