RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CENPQQ7L2Z9 268 aaPredicted RBP27.22■■□□□ 1.95
BRF1-216ENST00000550208 MAPKAPK5Q8IW41 473 aa27.22■■□□□ 1.95
BRF1-216ENST00000550208 VEGFBP49765 207 aa27.21■■□□□ 1.95
BRF1-216ENST00000550208 CYP4F22Q6NT55 531 aa27.21■■□□□ 1.95
BRF1-216ENST00000550208 PAXIP1Q6ZW49 1069 aaPredicted RBP27.21■■□□□ 1.95
BRF1-216ENST00000550208 MIGA2Q7L4E1 593 aa27.21■■□□□ 1.95
BRF1-216ENST00000550208 ZSCAN29Q8IWY8 852 aaPredicted RBP27.21■■□□□ 1.95
BRF1-216ENST00000550208 EVI5LQ96CN4 794 aa27.21■■□□□ 1.95
BRF1-216ENST00000550208 KLRG1Q96E93 195 aa27.21■■□□□ 1.95
BRF1-216ENST00000550208 HHIPL1Q96JK4 782 aa27.21■■□□□ 1.95
BRF1-216ENST00000550208 FSD1Q9BTV5 496 aa27.21■■□□□ 1.95
BRF1-216ENST00000550208 OSBPL5Q9H0X9 879 aaPredicted RBP27.21■■□□□ 1.95
BRF1-216ENST00000550208 RPAP1Q9BWH6 1393 aaPredicted RBP27.21■■□□□ 1.95
BRF1-216ENST00000550208 PAPPA2Q9BXP8 1791 aa27.2■■□□□ 1.95
BRF1-216ENST00000550208 AK9Q5TCS8 1911 aa27.2■■□□□ 1.95
BRF1-216ENST00000550208 MAP3K11Q16584 847 aa27.2■■□□□ 1.94
BRF1-216ENST00000550208 LDLRAD1Q5T700 205 aa27.2■■□□□ 1.94
BRF1-216ENST00000550208 CERS3Q8IU89 383 aa27.2■■□□□ 1.94
BRF1-216ENST00000550208 LCORLQ8N3X6 602 aa27.2■■□□□ 1.94
BRF1-216ENST00000550208 PUS7LQ9H0K6 701 aaKnown RBP27.2■■□□□ 1.94
BRF1-216ENST00000550208 ARMT1Q9H993 441 aa27.2■■□□□ 1.94
BRF1-216ENST00000550208 USP5P45974 858 aa27.19■■□□□ 1.94
BRF1-216ENST00000550208 RGMBQ6NW40 437 aa27.19■■□□□ 1.94
BRF1-216ENST00000550208 MYH7P12883 1935 aa27.18■■□□□ 1.94
BRF1-216ENST00000550208 TRIM6-TRIM34B2RNG4 842 aa27.18■■□□□ 1.94
BRF1-216ENST00000550208 MBD4O95243 580 aa27.18■■□□□ 1.94
BRF1-216ENST00000550208 ZFYP08048 801 aaPredicted RBP27.18■■□□□ 1.94
BRF1-216ENST00000550208 SLURP2P0DP57 97 aa27.18■■□□□ 1.94
BRF1-216ENST00000550208 GRM1Q13255 1194 aa27.18■■□□□ 1.94
BRF1-216ENST00000550208 HOOK2Q96ED9 719 aa27.18■■□□□ 1.94
BRF1-216ENST00000550208 CAPNS2Q96L46 248 aa27.18■■□□□ 1.94
BRF1-216ENST00000550208 CSRNP1Q96S65 589 aa27.18■■□□□ 1.94
BRF1-216ENST00000550208 FLT1P17948 1338 aa27.17■■□□□ 1.94
BRF1-216ENST00000550208 IREB2P48200 963 aaKnown RBP27.17■■□□□ 1.94
BRF1-216ENST00000550208 ZNF157P51786 506 aaPredicted RBP27.17■■□□□ 1.94
BRF1-216ENST00000550208 ERICH6BQ5W0A0 696 aa27.17■■□□□ 1.94
BRF1-216ENST00000550208 OSBP2Q969R2 916 aa27.17■■□□□ 1.94
BRF1-216ENST00000550208 RILPL2Q969X0 211 aa27.17■■□□□ 1.94
BRF1-216ENST00000550208 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.17■■□□□ 1.94
BRF1-216ENST00000550208 WDR33Q9C0J8 1336 aaKnown RBP27.16■■□□□ 1.94
BRF1-216ENST00000550208 LRRFIP1Q32MZ4 808 aaKnown RBP27.16■■□□□ 1.94
BRF1-216ENST00000550208 DCAF15Q66K64 600 aa27.16■■□□□ 1.94
BRF1-216ENST00000550208 APPBP2Q92624 585 aa27.16■■□□□ 1.94
BRF1-216ENST00000550208 CRNKL1Q9BZJ0 848 aaKnown RBP27.16■■□□□ 1.94
BRF1-216ENST00000550208 SAP30BPQ9UHR5 308 aaKnown RBP27.16■■□□□ 1.94
BRF1-216ENST00000550208 CDK5RAP2Q96SN8 1893 aa27.15■■□□□ 1.94
BRF1-216ENST00000550208 PRKAB2O43741 272 aa27.15■■□□□ 1.94
BRF1-216ENST00000550208 ZNF341Q9BYN7 854 aa27.15■■□□□ 1.94
BRF1-216ENST00000550208 PALD1Q9ULE6 856 aa27.15■■□□□ 1.94
BRF1-216ENST00000550208 ATRNL1Q5VV63 1379 aa27.14■■□□□ 1.94
BRF1-216ENST00000550208 ECE1P42892 770 aa27.14■■□□□ 1.94
BRF1-216ENST00000550208 MAP3K9P80192 1104 aa27.14■■□□□ 1.94
BRF1-216ENST00000550208 SKAP1Q86WV1 359 aa27.14■■□□□ 1.94
BRF1-216ENST00000550208 AIDAQ96BJ3 306 aa27.14■■□□□ 1.94
BRF1-216ENST00000550208 CLMNQ96JQ2 1002 aa27.14■■□□□ 1.94
BRF1-216ENST00000550208 SEC62Q99442 399 aaKnown RBP27.14■■□□□ 1.94
BRF1-216ENST00000550208 PPP4R2Q9NY27 417 aa27.14■■□□□ 1.94
BRF1-216ENST00000550208 M0R2C6 588 aa27.13■■□□□ 1.93
BRF1-216ENST00000550208 MAP3K10Q02779 954 aa27.13■■□□□ 1.93
BRF1-216ENST00000550208 ZMYM1Q5SVZ6 1142 aa27.13■■□□□ 1.93
BRF1-216ENST00000550208 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.13■■□□□ 1.93
BRF1-216ENST00000550208 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.13■■□□□ 1.93
BRF1-216ENST00000550208 SDR42E1Q8WUS8 393 aa27.13■■□□□ 1.93
BRF1-216ENST00000550208 CCDC102AQ96A19 550 aa27.13■■□□□ 1.93
BRF1-216ENST00000550208 SLC10A4Q96EP9 437 aa27.13■■□□□ 1.93
BRF1-216ENST00000550208 STRBPQ96SI9 672 aaKnown RBP27.13■■□□□ 1.93
BRF1-216ENST00000550208 DHX36Q9H2U1 1008 aaKnown RBP27.13■■□□□ 1.93
BRF1-216ENST00000550208 FAM155AB1AL88 458 aaPredicted RBP27.12■■□□□ 1.93
BRF1-216ENST00000550208 AOC2O75106 756 aa27.12■■□□□ 1.93
BRF1-216ENST00000550208 TTC22Q5TAA0 569 aa27.12■■□□□ 1.93
BRF1-216ENST00000550208 ANKRD13AQ8IZ07 590 aa27.12■■□□□ 1.93
BRF1-216ENST00000550208 ZNF112Q9UJU3 913 aa27.12■■□□□ 1.93
BRF1-216ENST00000550208 UNCXA6NJT0 531 aa27.11■■□□□ 1.93
BRF1-216ENST00000550208 SLC4A8Q2Y0W8 1093 aa27.11■■□□□ 1.93
BRF1-216ENST00000550208 RASAL3Q86YV0 1011 aa27.11■■□□□ 1.93
BRF1-216ENST00000550208 ZKSCAN4Q969J2 545 aaPredicted RBP27.11■■□□□ 1.93
BRF1-216ENST00000550208 WRNIP1Q96S55 665 aa27.11■■□□□ 1.93
BRF1-216ENST00000550208 PI4KBQ9UBF8 816 aa27.11■■□□□ 1.93
BRF1-216ENST00000550208 SLC4A4Q9Y6R1 1079 aa27.11■■□□□ 1.93
BRF1-216ENST00000550208 COL2A1P02458 1487 aaPredicted RBP27.11■■□□□ 1.93
BRF1-216ENST00000550208 FOCADQ5VW36 1801 aa27.11■■□□□ 1.93
BRF1-216ENST00000550208 FAM196BA6NMK8 535 aa27.1■■□□□ 1.93
BRF1-216ENST00000550208 SLC10A3P09131 477 aa27.1■■□□□ 1.93
BRF1-216ENST00000550208 GSPT1P15170 499 aaKnown RBP27.1■■□□□ 1.93
BRF1-216ENST00000550208 ZIC5Q96T25 663 aa27.1■■□□□ 1.93
BRF1-216ENST00000550208 DCP1AQ9NPI6 582 aaPredicted RBP27.1■■□□□ 1.93
BRF1-216ENST00000550208 PHF20L1A8MW92 1017 aa27.09■■□□□ 1.93
BRF1-216ENST00000550208 GPAA1O43292 621 aa27.09■■□□□ 1.93
BRF1-216ENST00000550208 TBC1D12O60347 775 aa27.09■■□□□ 1.93
BRF1-216ENST00000550208 INPP5BP32019 993 aa27.09■■□□□ 1.93
BRF1-216ENST00000550208 FOXP4Q8IVH2 680 aaPredicted RBP27.09■■□□□ 1.93
BRF1-216ENST00000550208 ELP3Q9H9T3 547 aa27.09■■□□□ 1.93
BRF1-216ENST00000550208 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.09■■□□□ 1.93
BRF1-216ENST00000550208 VGLL4Q14135 290 aa27.08■■□□□ 1.93
BRF1-216ENST00000550208 ATP8A2Q9NTI2 1148 aa27.08■■□□□ 1.93
BRF1-216ENST00000550208 MCM9Q9NXL9 1143 aa27.08■■□□□ 1.93
BRF1-216ENST00000550208 POLR3DP05423 398 aaPredicted RBP27.07■■□□□ 1.92
BRF1-216ENST00000550208 SDSP20132 328 aa27.07■■□□□ 1.92
BRF1-216ENST00000550208 MKRN3Q13064 507 aaKnown RBP27.07■■□□□ 1.92
BRF1-216ENST00000550208 TICAM2Q86XR7 235 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms