RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-223ENST00000550188 DNAJC2Q99543 621 aaKnown RBP14.53□□□□□ -0.08
ARFGAP1-223ENST00000550188 ELP3Q9H9T3 547 aa14.53□□□□□ -0.08
ARFGAP1-223ENST00000550188 DDX4Q9NQI0 724 aaKnown RBP14.53□□□□□ -0.08
ARFGAP1-223ENST00000550188 MANSC4A6NHS7 340 aaPredicted RBP14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 GOLIM4O00461 696 aa14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 CYP7A1P22680 504 aa14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 PPP4CP60510 307 aa14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 COL13A1Q5TAT6 717 aaPredicted RBP14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 MIGA2Q7L4E1 593 aa14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 ADGRA1Q86SQ6 560 aa14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 CERS3Q8IU89 383 aa14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 SH3RF3Q8TEJ3 882 aaPredicted RBP14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 OPTNQ96CV9 577 aa14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 AATFQ9NY61 560 aaKnown RBP eCLIP14.52□□□□□ -0.09
ARFGAP1-223ENST00000550188 COL2A1P02458 1487 aaPredicted RBP14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 ATRNL1Q5VV63 1379 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 TM4SF4P48230 202 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 HDAC1Q13547 482 aaPredicted RBP14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 SH3BP5LQ7L8J4 393 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 MAGEB6Q8N7X4 407 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 GPATCH3Q96I76 525 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 BOLA2Q9H3K6 86 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 PAG1Q9NWQ8 432 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 RNF186Q9NXI6 227 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 TSKSQ9UJT2 592 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 PCNTO95613 3336 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 AKAP11Q9UKA4 1901 aa14.51□□□□□ -0.09
ARFGAP1-223ENST00000550188 DDTLA6NHG4 134 aaPredicted RBP14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 TRPA1O75762 1119 aa14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 GJA5P36382 358 aa14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 INHBEP58166 350 aa14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 ZKSCAN4Q969J2 545 aaPredicted RBP14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 HAUS7Q99871 368 aa14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 OSBPL5Q9H0X9 879 aaPredicted RBP14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 ECHDC1Q9NTX5 307 aa14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 ZNF112Q9UJU3 913 aa14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 SNCAIPQ9Y6H5 919 aa14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 MYH2Q9UKX2 1941 aa14.5□□□□□ -0.09
ARFGAP1-223ENST00000550188 SPDYE5A6NIY4 337 aa14.49□□□□□ -0.09
ARFGAP1-223ENST00000550188 SLC9C2Q5TAH2 1124 aa14.49□□□□□ -0.09
ARFGAP1-223ENST00000550188 ERO1BQ86YB8 467 aa14.49□□□□□ -0.09
ARFGAP1-223ENST00000550188 MIGA1Q8NAN2 632 aa14.49□□□□□ -0.09
ARFGAP1-223ENST00000550188 GCC1Q96CN9 775 aa14.49□□□□□ -0.09
ARFGAP1-223ENST00000550188 OTUD5Q96G74 571 aa14.49□□□□□ -0.09
ARFGAP1-223ENST00000550188 FLT1P17948 1338 aa14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 ALDH1A1P00352 501 aa14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 PDE6AP16499 860 aa14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 INPP5BP32019 993 aa14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 DYNLL1P63167 89 aaKnown RBP14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 MAP3K10Q02779 954 aa14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 NOL9Q5SY16 702 aaKnown RBP14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 EXOC6Q8TAG9 804 aa14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 TGFBRAP1Q8WUH2 860 aa14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 EDC3Q96F86 508 aaKnown RBP14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.48□□□□□ -0.097e-12■■■■■ 27.2
ARFGAP1-223ENST00000550188 DHX36Q9H2U1 1008 aaKnown RBP14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 ZBTB47Q9UFB7 747 aaPredicted RBP14.48□□□□□ -0.09
ARFGAP1-223ENST00000550188 OTOFQ9HC10 1997 aa14.47□□□□□ -0.09
ARFGAP1-223ENST00000550188 TBC1D12O60347 775 aa14.47□□□□□ -0.09
ARFGAP1-223ENST00000550188 GTF2A2P52657 109 aa14.47□□□□□ -0.09
ARFGAP1-223ENST00000550188 PPIL2Q13356 520 aa14.47□□□□□ -0.09
ARFGAP1-223ENST00000550188 IFNL1Q8IU54 200 aa14.47□□□□□ -0.09
ARFGAP1-223ENST00000550188 MAPKAPK5Q8IW41 473 aa14.47□□□□□ -0.09
ARFGAP1-223ENST00000550188 TTC41PQ6P2S7 1318 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 ZNF532Q9HCE3 1301 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 TESPA1A2RU30 521 aaPredicted RBP14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 PHF20L1A8MW92 1017 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 PPATQ06203 517 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 OTUD7BQ6GQQ9 843 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 TNS4Q8IZW8 715 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 MS4A4AQ96JQ5 239 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 RIOK1Q9BRS2 568 aaKnown RBP14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 CFHR5Q9BXR6 569 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 RWDD1Q9H446 243 aaPredicted RBP14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.46□□□□□ -0.091e-13■□□□□ 11
ARFGAP1-223ENST00000550188 PICK1Q9NRD5 415 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 PI4KBQ9UBF8 816 aa14.46□□□□□ -0.09
ARFGAP1-223ENST00000550188 DOCK2Q92608 1830 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 MAGEB6P1A0A0J9YX57 407 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 TCRBV5S4A2TA0A5A2 114 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 IGF2BP3O00425 579 aaKnown RBP eCLIP14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 IRF6O14896 467 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 ERC2O15083 957 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 CTNND1O60716 968 aaKnown RBP14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 ADD2P35612 726 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 USP5P45974 858 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 IRX6P78412 446 aaPredicted RBP14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 SNAPC2Q13487 334 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 ANKRD45Q5TZF3 282 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 TSHZ3Q63HK5 1081 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 ZSCAN25Q6NSZ9 544 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 SCYL3Q8IZE3 742 aa14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 HERC5Q9UII4 1024 aaKnown RBP14.45□□□□□ -0.1
ARFGAP1-223ENST00000550188 CCL15-CCL14A0A0B4J2E2 113 aa14.44□□□□□ -0.1
ARFGAP1-223ENST00000550188 TBC1D8O95759 1140 aa14.44□□□□□ -0.1
ARFGAP1-223ENST00000550188 HLA-DOAP06340 250 aa14.44□□□□□ -0.1
ARFGAP1-223ENST00000550188 CETPP11597 493 aa14.44□□□□□ -0.1
ARFGAP1-223ENST00000550188 CCL15Q16663 113 aa14.44□□□□□ -0.1
ARFGAP1-223ENST00000550188 BRI3BPQ8WY22 251 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms