RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 PPP1R9AQ9ULJ8 1098 aa6.97□□□□□ -1.29
SNRPF-202ENST00000549580 H3BRB1 525 aa6.96□□□□□ -1.3
SNRPF-202ENST00000549580 INHBBP09529 407 aa6.96□□□□□ -1.3
SNRPF-202ENST00000549580 FKBP4Q02790 459 aaKnown RBP eCLIP6.96□□□□□ -1.3
SNRPF-202ENST00000549580 SF3B2Q13435 895 aaKnown RBP6.96□□□□□ -1.3
SNRPF-202ENST00000549580 KCNMB1Q16558 191 aa6.96□□□□□ -1.3
SNRPF-202ENST00000549580 CYP27C1Q4G0S4 372 aa6.96□□□□□ -1.3
SNRPF-202ENST00000549580 SNX29Q8TEQ0 813 aa6.96□□□□□ -1.3
SNRPF-202ENST00000549580 TUT1Q9H6E5 874 aaKnown RBP6.96□□□□□ -1.3
SNRPF-202ENST00000549580 CYP11A1P05108 521 aa6.95□□□□□ -1.3
SNRPF-202ENST00000549580 FAM87AP0C7U9 286 aa6.95□□□□□ -1.3
SNRPF-202ENST00000549580 NPR3P17342 541 aa6.95□□□□□ -1.3
SNRPF-202ENST00000549580 SLC23A3Q6PIS1 610 aa6.95□□□□□ -1.3
SNRPF-202ENST00000549580 SYDE1Q6ZW31 735 aaPredicted RBP6.95□□□□□ -1.3
SNRPF-202ENST00000549580 NPAS4Q8IUM7 802 aa6.95□□□□□ -1.3
SNRPF-202ENST00000549580 GLYCTKQ8IVS8 523 aa6.95□□□□□ -1.3
SNRPF-202ENST00000549580 LIN37Q96GY3 246 aaPredicted RBP6.95□□□□□ -1.3
SNRPF-202ENST00000549580 CLEC4MQ9H2X3 399 aaPredicted RBP6.95□□□□□ -1.3
SNRPF-202ENST00000549580 ANO2Q9NQ90 1003 aa6.95□□□□□ -1.3
SNRPF-202ENST00000549580 ANKRD33BA6NCL7 494 aa6.94□□□□□ -1.3
SNRPF-202ENST00000549580 AOC2O75106 756 aa6.94□□□□□ -1.3
SNRPF-202ENST00000549580 C1QTNF9P0C862 333 aa6.94□□□□□ -1.3
SNRPF-202ENST00000549580 ARHGAP4P98171 946 aa6.94□□□□□ -1.3
SNRPF-202ENST00000549580 AAMPQ13685 434 aa6.94□□□□□ -1.3
SNRPF-202ENST00000549580 TCF12Q99081 682 aa6.94□□□□□ -1.3
SNRPF-202ENST00000549580 ZFYVE28Q9HCC9 887 aa6.94□□□□□ -1.3
SNRPF-202ENST00000549580 PRDM7Q9NQW5 492 aa6.94□□□□□ -1.3
SNRPF-202ENST00000549580 A0A1W2PP55 124 aa6.93□□□□□ -1.3
SNRPF-202ENST00000549580 CTSWP56202 376 aa6.93□□□□□ -1.3
SNRPF-202ENST00000549580 IFI16Q16666 785 aaKnown RBP6.93□□□□□ -1.3
SNRPF-202ENST00000549580 CCNJLQ8IV13 435 aa6.93□□□□□ -1.3
SNRPF-202ENST00000549580 WDR89Q96FK6 387 aaPredicted RBP6.93□□□□□ -1.3
SNRPF-202ENST00000549580 WDR18Q9BV38 432 aa6.93□□□□□ -1.3
SNRPF-202ENST00000549580 EIF4EBP3O60516 100 aaPredicted RBP6.92□□□□□ -1.3
SNRPF-202ENST00000549580 LEFTY1O75610 366 aa6.92□□□□□ -1.3
SNRPF-202ENST00000549580 ZNF16P17020 682 aaPredicted RBP6.92□□□□□ -1.3
SNRPF-202ENST00000549580 AOC3Q16853 763 aa6.92□□□□□ -1.3
SNRPF-202ENST00000549580 ANGEL2Q5VTE6 544 aaKnown RBP6.92□□□□□ -1.3
SNRPF-202ENST00000549580 HRASLS5Q96KN8 279 aa6.92□□□□□ -1.3
SNRPF-202ENST00000549580 CORO1BQ9BR76 489 aa6.92□□□□□ -1.3
SNRPF-202ENST00000549580 MKNK2Q9HBH9 465 aa6.92□□□□□ -1.3
SNRPF-202ENST00000549580 IGSF5Q9NSI5 407 aa6.92□□□□□ -1.3
SNRPF-202ENST00000549580 DCTN4Q9UJW0 460 aa6.92□□□□□ -1.3
SNRPF-202ENST00000549580 LIG1P18858 919 aa6.91□□□□□ -1.3
SNRPF-202ENST00000549580 PDE3AQ14432 1141 aa6.91□□□□□ -1.3
SNRPF-202ENST00000549580 C20orf173Q96LM9 149 aa6.91□□□□□ -1.3
SNRPF-202ENST00000549580 ASB16Q96NS5 453 aa6.91□□□□□ -1.3
SNRPF-202ENST00000549580 BCL2L13Q9BXK5 485 aa6.91□□□□□ -1.3
SNRPF-202ENST00000549580 ZC3H12CQ9C0D7 883 aaKnown RBP6.91□□□□□ -1.3
SNRPF-202ENST00000549580 LIN7BQ9HAP6 207 aa6.91□□□□□ -1.3
SNRPF-202ENST00000549580 CCDC87Q9NVE4 849 aa6.91□□□□□ -1.3
SNRPF-202ENST00000549580 KIAA1522Q9P206 1035 aaPredicted RBP6.91□□□□□ -1.3
SNRPF-202ENST00000549580 PLAGL2Q9UPG8 496 aa6.91□□□□□ -1.3
SNRPF-202ENST00000549580 TMPRSS2O15393 492 aa6.9□□□□□ -1.3
SNRPF-202ENST00000549580 FZD6O60353 706 aa6.9□□□□□ -1.3
SNRPF-202ENST00000549580 PRR23BQ6ZRT6 265 aa6.9□□□□□ -1.3
SNRPF-202ENST00000549580 CTNND2Q9UQB3 1225 aa6.9□□□□□ -1.3
SNRPF-202ENST00000549580 FAM13AO94988 1023 aa6.89□□□□□ -1.31
SNRPF-202ENST00000549580 CEACAM5P06731 702 aa6.89□□□□□ -1.31
SNRPF-202ENST00000549580 MAPK1P28482 360 aa6.89□□□□□ -1.31
SNRPF-202ENST00000549580 OXCT1P55809 520 aa6.89□□□□□ -1.31
SNRPF-202ENST00000549580 FYB2Q5VWT5 728 aa6.89□□□□□ -1.31
SNRPF-202ENST00000549580 USPL1Q5W0Q7 1092 aa6.89□□□□□ -1.31
SNRPF-202ENST00000549580 FBXO33Q7Z6M2 555 aa6.89□□□□□ -1.31
SNRPF-202ENST00000549580 B3GALT4O96024 378 aa6.88□□□□□ -1.31
SNRPF-202ENST00000549580 ZNF157P51786 506 aaPredicted RBP6.88□□□□□ -1.31
SNRPF-202ENST00000549580 HP1BP3Q5SSJ5 553 aaPredicted RBP6.88□□□□□ -1.31
SNRPF-202ENST00000549580 ALKBH2Q6NS38 261 aa6.88□□□□□ -1.31
SNRPF-202ENST00000549580 ZSCAN29Q8IWY8 852 aaPredicted RBP6.88□□□□□ -1.31
SNRPF-202ENST00000549580 GIPC2Q8TF65 315 aa6.88□□□□□ -1.31
SNRPF-202ENST00000549580 HOXA5P20719 270 aa6.87□□□□□ -1.31
SNRPF-202ENST00000549580 MRRFQ96E11 262 aaKnown RBP6.87□□□□□ -1.31
SNRPF-202ENST00000549580 FANCD2OSQ96PS1 177 aa6.87□□□□□ -1.31
SNRPF-202ENST00000549580 RBCK1Q9BYM8 510 aa6.87□□□□□ -1.31
SNRPF-202ENST00000549580 TNKS2Q9H2K2 1166 aa6.87□□□□□ -1.31
SNRPF-202ENST00000549580 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
SNRPF-202ENST00000549580 CCDC86Q9H6F5 360 aaKnown RBP6.87□□□□□ -1.31
SNRPF-202ENST00000549580 CD320Q9NPF0 282 aa6.87□□□□□ -1.31
SNRPF-202ENST00000549580 TMEM265A0A087WTH1 108 aa6.86□□□□□ -1.31
SNRPF-202ENST00000549580 NPIPB6E9PJ23 425 aa6.86□□□□□ -1.31
SNRPF-202ENST00000549580 NFIBO00712 420 aa6.86□□□□□ -1.31
SNRPF-202ENST00000549580 GLI1P08151 1106 aa6.86□□□□□ -1.31
SNRPF-202ENST00000549580 ITIH2P19823 946 aa6.86□□□□□ -1.31
SNRPF-202ENST00000549580 EHHADHQ08426 723 aa6.86□□□□□ -1.31
SNRPF-202ENST00000549580 ZNF326Q5BKZ1 582 aaKnown RBP6.86□□□□□ -1.31
SNRPF-202ENST00000549580 GALNT12Q8IXK2 581 aa6.86□□□□□ -1.31
SNRPF-202ENST00000549580 DISC1Q9NRI5 854 aa6.86□□□□□ -1.31
SNRPF-202ENST00000549580 SYNGAP1Q96PV0 1343 aa6.85□□□□□ -1.31
SNRPF-202ENST00000549580 RNGTTO60942 597 aaKnown RBP6.85□□□□□ -1.31
SNRPF-202ENST00000549580 HCLS1P14317 486 aaPredicted RBP6.85□□□□□ -1.31
SNRPF-202ENST00000549580 VAMP1P23763 118 aa6.85□□□□□ -1.31
SNRPF-202ENST00000549580 SMYD4Q8IYR2 804 aaPredicted RBP6.85□□□□□ -1.31
SNRPF-202ENST00000549580 GJD3Q8N144 294 aa6.85□□□□□ -1.31
SNRPF-202ENST00000549580 CITED4Q96RK1 184 aa6.85□□□□□ -1.31
SNRPF-202ENST00000549580 CSRNP1Q96S65 589 aa6.85□□□□□ -1.31
SNRPF-202ENST00000549580 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
SNRPF-202ENST00000549580 PIDD1Q9HB75 910 aa6.85□□□□□ -1.31
SNRPF-202ENST00000549580 ZNF862O60290 1169 aa6.84□□□□□ -1.31
SNRPF-202ENST00000549580 TTLL4Q14679 1199 aa6.84□□□□□ -1.31
SNRPF-202ENST00000549580 ARHGAP27Q6ZUM4 889 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms