RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 ZAP70P43403 619 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 CCINQ13939 588 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 TRIP4Q15650 581 aaPredicted RBP8.55□□□□□ -1.04
COX6A1-202ENST00000549525 NBPF6Q5VWK0 638 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 RUNDC1Q96C34 613 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 NBPF4Q96M43 638 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 ZFATQ9P243 1243 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 USP35Q9P2H5 1018 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 BCL9LQ86UU0 1499 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 FAM208AQ9UK61 1670 aaKnown RBP8.55□□□□□ -1.04
COX6A1-202ENST00000549525 LMO7Q8WWI1 1683 aa8.54□□□□□ -1.04
COX6A1-202ENST00000549525 KDRP35968 1356 aa8.54□□□□□ -1.04
COX6A1-202ENST00000549525 HSP90AB1P08238 724 aaKnown RBP8.54□□□□□ -1.04
COX6A1-202ENST00000549525 NFKB1P19838 968 aa8.54□□□□□ -1.04
COX6A1-202ENST00000549525 LMOD3Q0VAK6 560 aa8.54□□□□□ -1.04
COX6A1-202ENST00000549525 B4GALNT3Q6L9W6 998 aa8.54□□□□□ -1.04
COX6A1-202ENST00000549525 ATCAYQ86WG3 371 aa8.54□□□□□ -1.04
COX6A1-202ENST00000549525 FAM9BQ8IZU0 186 aa8.54□□□□□ -1.04
COX6A1-202ENST00000549525 TNFRSF25Q93038 417 aa8.54□□□□□ -1.04
COX6A1-202ENST00000549525 ENAMQ9NRM1 1142 aa8.54□□□□□ -1.04
COX6A1-202ENST00000549525 COL18A1P39060 1754 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 ADARB2-AS1A8MUL3 147 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 HMOX1P09601 288 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 MPSTP25325 297 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 SERPINB4P48594 390 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 SNRPNP63162 240 aaKnown RBP8.53□□□□□ -1.04
COX6A1-202ENST00000549525 PDE3BQ13370 1112 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 ZNF211Q13398 564 aaPredicted RBP8.53□□□□□ -1.04
COX6A1-202ENST00000549525 DDB1Q16531 1140 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 C1orf141Q5JVX7 400 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 KRT25Q7Z3Z0 450 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 CMTR1Q8N1G2 835 aaKnown RBP8.53□□□□□ -1.04
COX6A1-202ENST00000549525 NEDD1Q8NHV4 660 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
COX6A1-202ENST00000549525 RTF1Q92541 710 aaKnown RBP8.53□□□□□ -1.04
COX6A1-202ENST00000549525 BTBD6Q96KE9 485 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 ANO2Q9NQ90 1003 aa8.53□□□□□ -1.04
COX6A1-202ENST00000549525 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.53□□□□□ -1.04
COX6A1-202ENST00000549525 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.52□□□□□ -1.05
COX6A1-202ENST00000549525 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.05
COX6A1-202ENST00000549525 ELOA3DA6NLF2 546 aaPredicted RBP8.52□□□□□ -1.05
COX6A1-202ENST00000549525 HTATSF1O43719 755 aaKnown RBP8.52□□□□□ -1.05
COX6A1-202ENST00000549525 XYLBO75191 536 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 SASH3O75995 380 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 EGFRP00533 1210 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 NPR3P17342 541 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 HMGB2P26583 209 aaKnown RBP8.52□□□□□ -1.05
COX6A1-202ENST00000549525 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
COX6A1-202ENST00000549525 PRKAR2BP31323 418 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 CALD1Q05682 793 aaKnown RBP8.52□□□□□ -1.05
COX6A1-202ENST00000549525 ELOA3BQ3SY89 546 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 ELOA3Q8NG57 546 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 GPR152Q8TDT2 470 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 C11orf16Q9NQ32 467 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 ATRNO75882 1429 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 PLCH1Q4KWH8 1693 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 PCDH11XQ9BZA7 1347 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 PCDH11YQ9BZA8 1340 aa8.52□□□□□ -1.05
COX6A1-202ENST00000549525 PEAK1Q9H792 1746 aa8.51□□□□□ -1.05
COX6A1-202ENST00000549525 COL3A1P02461 1466 aaPredicted RBP8.51□□□□□ -1.05
COX6A1-202ENST00000549525 ABL1P00519 1130 aa8.51□□□□□ -1.05
COX6A1-202ENST00000549525 PDE4CQ08493 712 aa8.51□□□□□ -1.05
COX6A1-202ENST00000549525 CHSY3Q70JA7 882 aa8.51□□□□□ -1.05
COX6A1-202ENST00000549525 IFNL2Q8IZJ0 200 aa8.51□□□□□ -1.05
COX6A1-202ENST00000549525 PNMA5Q96PV4 448 aa8.51□□□□□ -1.05
COX6A1-202ENST00000549525 EFCC1Q9HA90 598 aa8.51□□□□□ -1.05
COX6A1-202ENST00000549525 MAP3K6O95382 1288 aa8.5□□□□□ -1.05
COX6A1-202ENST00000549525 ARID4AP29374 1257 aaPredicted RBP8.5□□□□□ -1.05
COX6A1-202ENST00000549525 ADH7P40394 386 aa8.5□□□□□ -1.05
COX6A1-202ENST00000549525 EIF1AXP47813 144 aaKnown RBP8.5□□□□□ -1.05
COX6A1-202ENST00000549525 GSK3AP49840 483 aa8.5□□□□□ -1.05
COX6A1-202ENST00000549525 NCAPD2Q15021 1401 aa8.5□□□□□ -1.05
COX6A1-202ENST00000549525 AKAP4Q5JQC9 854 aa8.5□□□□□ -1.05
COX6A1-202ENST00000549525 USHBP1Q8N6Y0 703 aa8.5□□□□□ -1.05
COX6A1-202ENST00000549525 MTMR7Q9Y216 660 aa8.5□□□□□ -1.05
COX6A1-202ENST00000549525 STARD13Q9Y3M8 1113 aa8.5□□□□□ -1.05
COX6A1-202ENST00000549525 CNTNAP5Q8WYK1 1306 aa8.5□□□□□ -1.05
COX6A1-202ENST00000549525 RGPD5Q99666 1765 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 RARAP10276 462 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 AMPD1P23109 780 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 DGKGP49619 791 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 MARSP56192 900 aaKnown RBP8.49□□□□□ -1.05
COX6A1-202ENST00000549525 NFE2L2Q16236 605 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 ECM1Q16610 540 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 CCDC184Q52MB2 194 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 NOM1Q5C9Z4 860 aaKnown RBP8.49□□□□□ -1.05
COX6A1-202ENST00000549525 ZNF530Q6P9A1 599 aaPredicted RBP8.49□□□□□ -1.05
COX6A1-202ENST00000549525 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 PIK3R5Q8WYR1 880 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 PLEKHF1Q96S99 279 aa8.49□□□□□ -1.05
COX6A1-202ENST00000549525 UBE2OQ9C0C9 1292 aaKnown RBP8.49□□□□□ -1.05
COX6A1-202ENST00000549525 OVOS2A0A0G2JMS6 1433 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 RIPK4P57078 832 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
COX6A1-202ENST00000549525 TBC1D8BQ0IIM8 1120 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 SF3B2Q13435 895 aaKnown RBP8.48□□□□□ -1.05
COX6A1-202ENST00000549525 CCDC27Q2M243 656 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 ERICH6BQ5W0A0 696 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms