RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ADORA1P30542 326 aa15.76■□□□□ 0.11
HDAC7-228ENST00000548938 JMYQ8N9B5 988 aa15.76■□□□□ 0.11
HDAC7-228ENST00000548938 TC2NQ8N9U0 490 aa15.76■□□□□ 0.11
HDAC7-228ENST00000548938 MAP3K14Q99558 947 aa15.76■□□□□ 0.11
HDAC7-228ENST00000548938 DESI2Q9BSY9 194 aa15.76■□□□□ 0.11
HDAC7-228ENST00000548938 PARP4Q9UKK3 1724 aaKnown RBP15.76■□□□□ 0.11
HDAC7-228ENST00000548938 FAM237AA0A1B0GTK4 181 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 KRBA2Q6ZNG9 492 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 TXLNBQ8N3L3 684 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 CNNM3Q8NE01 707 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 PHKBQ93100 1093 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 DHX58Q96C10 678 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 PARD6BQ9BYG5 372 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 SPEF2Q9C093 1822 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 ZMYM6O95789 1325 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 GYS2P54840 703 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 SCARF1Q14162 830 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 ARFGAP3Q9NP61 516 aa15.75■□□□□ 0.11
HDAC7-228ENST00000548938 KARSQ15046 597 aaKnown RBP15.74■□□□□ 0.11
HDAC7-228ENST00000548938 NKX1-1Q15270 411 aaPredicted RBP15.74■□□□□ 0.11
HDAC7-228ENST00000548938 SPECC1Q5M775 1068 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 CWC25Q9NXE8 425 aaPredicted RBP15.74■□□□□ 0.11
HDAC7-228ENST00000548938 KCNH3Q9ULD8 1083 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 GOLGA6L9A6NEM1 432 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 ZNF213O14771 459 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 MYO1BO43795 1136 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 METAP2P50579 478 aaKnown RBP eCLIP15.74■□□□□ 0.111e-7■□□□□ 9.5
HDAC7-228ENST00000548938 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.11
HDAC7-228ENST00000548938 TTC39AQ5SRH9 613 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 CCDC102BQ68D86 513 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 PI16Q6UXB8 463 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 TTLL7Q6ZT98 887 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 FUT8Q9BYC5 575 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 NBPF3Q9H094 633 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 AHDC1Q5TGY3 1603 aaPredicted RBP15.74■□□□□ 0.11
HDAC7-228ENST00000548938 NBPF26B4DH59 902 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 STX10O60499 249 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
HDAC7-228ENST00000548938 NBPF14Q5TI25 921 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 NBPF10Q6P3W6 841 aaKnown RBP15.74■□□□□ 0.11
HDAC7-228ENST00000548938 TRMT44Q8IYL2 757 aaKnown RBP15.74■□□□□ 0.11
HDAC7-228ENST00000548938 NBPF15Q8N660 670 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.74■□□□□ 0.11
HDAC7-228ENST00000548938 SENP2Q9HC62 589 aa15.74■□□□□ 0.11
HDAC7-228ENST00000548938 ERVV-2B6SEH9 535 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 UBE2Q2LH0YL09 131 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 GPAA1O43292 621 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 ZNF827Q17R98 1081 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 SPECC1LQ69YQ0 1117 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 APPBP2Q92624 585 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 RABGGTAQ92696 567 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 IRX2Q9BZI1 471 aaPredicted RBP15.73■□□□□ 0.11
HDAC7-228ENST00000548938 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 NFE2L3Q9Y4A8 694 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 ZFYP08048 801 aaPredicted RBP15.73■□□□□ 0.11
HDAC7-228ENST00000548938 SLC20A2Q08357 652 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 MTF1Q14872 753 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 MUM1L1Q5H9M0 696 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 CYB5R4Q7L1T6 521 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 MICU3Q86XE3 530 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 GOLGA1Q92805 767 aa15.73■□□□□ 0.11
HDAC7-228ENST00000548938 MRPL44Q9H9J2 332 aaKnown RBP15.73■□□□□ 0.11
HDAC7-228ENST00000548938 ANGEL1Q9UNK9 670 aaKnown RBP15.73■□□□□ 0.11
HDAC7-228ENST00000548938 TJP1Q07157 1748 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 H3BQF6 201 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 CUTAO60888 179 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 ZAP70P43403 619 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 TBC1D10CQ8IV04 446 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 CCDC12Q8WUD4 166 aaPredicted RBP15.72■□□□□ 0.11
HDAC7-228ENST00000548938 XAGE2Q96GT9 111 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 CEP126Q9P2H0 1117 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 FEZ2Q9UHY8 353 aaPredicted RBP15.72■□□□□ 0.11
HDAC7-228ENST00000548938 MAN1B1Q9UKM7 699 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 CIAO1O76071 339 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 ZNF18P17022 549 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 LONRF2Q1L5Z9 754 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 GLI3P10071 1580 aa15.72■□□□□ 0.11
HDAC7-228ENST00000548938 WDR19Q8NEZ3 1342 aa15.71■□□□□ 0.11
HDAC7-228ENST00000548938 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
HDAC7-228ENST00000548938 MDM2Q00987 491 aaPredicted RBP15.71■□□□□ 0.11
HDAC7-228ENST00000548938 GPS2Q13227 327 aa15.71■□□□□ 0.11
HDAC7-228ENST00000548938 APOA5Q6Q788 366 aa15.71■□□□□ 0.11
HDAC7-228ENST00000548938 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
HDAC7-228ENST00000548938 SH2B2O14492 632 aaPredicted RBP15.71■□□□□ 0.11
HDAC7-228ENST00000548938 RANBP6O60518 1105 aaKnown RBP15.71■□□□□ 0.11
HDAC7-228ENST00000548938 GRIN1Q05586 938 aa15.71■□□□□ 0.11
HDAC7-228ENST00000548938 ZSCAN26Q16670 478 aa15.71■□□□□ 0.11
HDAC7-228ENST00000548938 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.71■□□□□ 0.11
HDAC7-228ENST00000548938 ZBTB3Q9H5J0 574 aa15.71■□□□□ 0.11
HDAC7-228ENST00000548938 CDKL5O76039 1030 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 TXLNAP40222 546 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 TRDNQ13061 729 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 MYL10Q9BUA6 226 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 A0A0U1RQJ8 604 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 SOWAHDA6NJG2 315 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 POSTNQ15063 836 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 GRAMD1CQ8IYS0 662 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 KRI1Q8N9T8 703 aaKnown RBP15.7■□□□□ 0.1
HDAC7-228ENST00000548938 ATRIPQ8WXE1 791 aa15.7■□□□□ 0.1
HDAC7-228ENST00000548938 ZBTB9Q96C00 473 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms