RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 GLIS2Q9BZE0 524 aaPredicted RBP25.31■■□□□ 1.64
CACNB3-210ENST00000548874 COL2A1P02458 1487 aaPredicted RBP25.31■■□□□ 1.64
CACNB3-210ENST00000548874 CCDC171Q6TFL3 1326 aa25.31■■□□□ 1.64
CACNB3-210ENST00000548874 RPAP1Q9BWH6 1393 aaPredicted RBP25.31■■□□□ 1.64
CACNB3-210ENST00000548874 PICALMQ13492 652 aa25.3■■□□□ 1.64
CACNB3-210ENST00000548874 USP48Q86UV5 1035 aa25.3■■□□□ 1.64
CACNB3-210ENST00000548874 MAPKAPK5Q8IW41 473 aa25.3■■□□□ 1.64
CACNB3-210ENST00000548874 ZFPM1Q8IX07 1006 aa25.3■■□□□ 1.64
CACNB3-210ENST00000548874 SDR42E1Q8WUS8 393 aa25.3■■□□□ 1.64
CACNB3-210ENST00000548874 OSBPL5Q9H0X9 879 aaPredicted RBP25.3■■□□□ 1.64
CACNB3-210ENST00000548874 SLC4A4Q9Y6R1 1079 aa25.3■■□□□ 1.64
CACNB3-210ENST00000548874 DDX60LQ5H9U9 1706 aaKnown RBP25.29■■□□□ 1.64
CACNB3-210ENST00000548874 GSG1L2A8MUP6 293 aa25.29■■□□□ 1.64
CACNB3-210ENST00000548874 FOXP2O15409 715 aa25.29■■□□□ 1.64
CACNB3-210ENST00000548874 SGSM2O43147 1006 aa25.29■■□□□ 1.64
CACNB3-210ENST00000548874 USP5P45974 858 aa25.29■■□□□ 1.64
CACNB3-210ENST00000548874 TCP10Q12799 353 aa25.29■■□□□ 1.64
CACNB3-210ENST00000548874 SMC1BQ8NDV3 1235 aa25.29■■□□□ 1.64
CACNB3-210ENST00000548874 TEPSINQ96N21 525 aa25.29■■□□□ 1.64
CACNB3-210ENST00000548874 DCP1AQ9NPI6 582 aaPredicted RBP25.29■■□□□ 1.64
CACNB3-210ENST00000548874 ATP8A2Q9NTI2 1148 aa25.29■■□□□ 1.64
CACNB3-210ENST00000548874 ATRNL1Q5VV63 1379 aa25.29■■□□□ 1.64
CACNB3-210ENST00000548874 ITGBL1O95965 494 aaPredicted RBP25.28■■□□□ 1.64
CACNB3-210ENST00000548874 MFAP1P55081 439 aaKnown RBP25.28■■□□□ 1.64
CACNB3-210ENST00000548874 ESYT1Q9BSJ8 1104 aa25.28■■□□□ 1.64
CACNB3-210ENST00000548874 TMEM39BQ9GZU3 492 aa25.28■■□□□ 1.64
CACNB3-210ENST00000548874 PATL2C9JE40 543 aaKnown RBP25.27■■□□□ 1.64
CACNB3-210ENST00000548874 VPS53Q5VIR6 699 aa25.27■■□□□ 1.64
CACNB3-210ENST00000548874 GIMAP6Q6P9H5 292 aa25.27■■□□□ 1.64
CACNB3-210ENST00000548874 CASC1Q6TDU7 716 aa25.27■■□□□ 1.64
CACNB3-210ENST00000548874 SH3BP5LQ7L8J4 393 aa25.27■■□□□ 1.64
CACNB3-210ENST00000548874 EPB41L4AQ9HCS5 686 aaPredicted RBP25.27■■□□□ 1.64
CACNB3-210ENST00000548874 NAV1Q8NEY1 1877 aa25.27■■□□□ 1.64
CACNB3-210ENST00000548874 DLK2Q6UY11 383 aa25.26■■□□□ 1.63
CACNB3-210ENST00000548874 CDAN1Q8IWY9 1227 aa25.26■■□□□ 1.63
CACNB3-210ENST00000548874 DDTLA6NHG4 134 aaPredicted RBP25.25■■□□□ 1.63
CACNB3-210ENST00000548874 CDCA5Q96FF9 252 aa25.25■■□□□ 1.63
CACNB3-210ENST00000548874 TRAF5O00463 557 aa25.24■■□□□ 1.63
CACNB3-210ENST00000548874 HSPD1P10809 573 aaKnown RBP25.24■■□□□ 1.63
CACNB3-210ENST00000548874 FSTL1Q12841 308 aa25.24■■□□□ 1.63
CACNB3-210ENST00000548874 PRAMEF18Q5VWM3 479 aa25.24■■□□□ 1.63
CACNB3-210ENST00000548874 IFNL3Q8IZI9 196 aa25.24■■□□□ 1.63
CACNB3-210ENST00000548874 DHX36Q9H2U1 1008 aaKnown RBP25.24■■□□□ 1.63
CACNB3-210ENST00000548874 SSC5DA1L4H1 1573 aa25.23■■□□□ 1.63
CACNB3-210ENST00000548874 ALX1Q15699 326 aa25.23■■□□□ 1.63
CACNB3-210ENST00000548874 MCM9Q9NXL9 1143 aa25.23■■□□□ 1.63
CACNB3-210ENST00000548874 SAP30BPQ9UHR5 308 aaKnown RBP25.23■■□□□ 1.63
CACNB3-210ENST00000548874 MYH1P12882 1939 aa25.23■■□□□ 1.63
CACNB3-210ENST00000548874 ZMYM6O95789 1325 aa25.22■■□□□ 1.63
CACNB3-210ENST00000548874 PASKQ96RG2 1323 aa25.22■■□□□ 1.63
CACNB3-210ENST00000548874 FMR1Q06787 632 aaKnown RBP eCLIP25.22■■□□□ 1.63
CACNB3-210ENST00000548874 NBPF12Q5TAG4 269 aaPredicted RBP25.22■■□□□ 1.63
CACNB3-210ENST00000548874 DDRGK1Q96HY6 314 aa25.22■■□□□ 1.63
CACNB3-210ENST00000548874 DSCC1Q9BVC3 393 aa25.22■■□□□ 1.63
CACNB3-210ENST00000548874 NACAP1Q9BZK3 213 aa25.22■■□□□ 1.63
CACNB3-210ENST00000548874 PALD1Q9ULE6 856 aa25.22■■□□□ 1.63
CACNB3-210ENST00000548874 BAZ2AQ9UIF9 1905 aaKnown RBP25.22■■□□□ 1.63
CACNB3-210ENST00000548874 APPP05067 770 aa25.21■■□□□ 1.63
CACNB3-210ENST00000548874 ZSCAN29Q8IWY8 852 aaPredicted RBP25.21■■□□□ 1.63
CACNB3-210ENST00000548874 CSRNP1Q96S65 589 aa25.21■■□□□ 1.63
CACNB3-210ENST00000548874 SIPA1L1O43166 1804 aa25.21■■□□□ 1.63
CACNB3-210ENST00000548874 USP17L12C9JPN9 530 aa25.2■■□□□ 1.62
CACNB3-210ENST00000548874 USP17L21D6R901 530 aa25.2■■□□□ 1.62
CACNB3-210ENST00000548874 SUPT20HL1Q3ZLR7 823 aa25.2■■□□□ 1.62
CACNB3-210ENST00000548874 SBK1Q52WX2 424 aa25.2■■□□□ 1.62
CACNB3-210ENST00000548874 CTR9Q6PD62 1173 aa25.2■■□□□ 1.62
CACNB3-210ENST00000548874 ARPP21Q9UBL0 812 aaPredicted RBP25.2■■□□□ 1.62
CACNB3-210ENST00000548874 TDO2P48775 406 aa25.19■■□□□ 1.62
CACNB3-210ENST00000548874 C12orf60Q5U649 245 aa25.19■■□□□ 1.62
CACNB3-210ENST00000548874 TTC6Q86TZ1 520 aa25.19■■□□□ 1.62
CACNB3-210ENST00000548874 NAPBQ9H115 298 aa25.19■■□□□ 1.62
CACNB3-210ENST00000548874 PI4KBQ9UBF8 816 aa25.19■■□□□ 1.62
CACNB3-210ENST00000548874 FGAP02671 866 aa25.18■■□□□ 1.62
CACNB3-210ENST00000548874 POLR3DP05423 398 aaPredicted RBP25.18■■□□□ 1.62
CACNB3-210ENST00000548874 CYP2D6P10635 497 aa25.18■■□□□ 1.62
CACNB3-210ENST00000548874 PLCD1P51178 756 aa25.18■■□□□ 1.62
CACNB3-210ENST00000548874 MAP3K10Q02779 954 aa25.18■■□□□ 1.62
CACNB3-210ENST00000548874 PTH1RQ03431 593 aa25.18■■□□□ 1.62
CACNB3-210ENST00000548874 METTL16Q86W50 562 aaKnown RBP25.18■■□□□ 1.62
CACNB3-210ENST00000548874 HOOK2Q96ED9 719 aa25.18■■□□□ 1.62
CACNB3-210ENST00000548874 LSG1Q9H089 658 aaKnown RBP25.18■■□□□ 1.62
CACNB3-210ENST00000548874 EHD4Q9H223 541 aa25.18■■□□□ 1.62
CACNB3-210ENST00000548874 HLA-DOAP06340 250 aa25.17■■□□□ 1.62
CACNB3-210ENST00000548874 EVX2Q03828 476 aa25.17■■□□□ 1.62
CACNB3-210ENST00000548874 LAMB1P07942 1786 aa25.16■■□□□ 1.62
CACNB3-210ENST00000548874 CYP2D7A0A087X1C5 515 aa25.16■■□□□ 1.62
CACNB3-210ENST00000548874 TBC1D12O60347 775 aa25.16■■□□□ 1.62
CACNB3-210ENST00000548874 NF2P35240 595 aa25.16■■□□□ 1.62
CACNB3-210ENST00000548874 SLC4A8Q2Y0W8 1093 aa25.16■■□□□ 1.62
CACNB3-210ENST00000548874 KIAA1211Q6ZU35 1233 aa25.16■■□□□ 1.62
CACNB3-210ENST00000548874 FOXP4Q8IVH2 680 aaPredicted RBP25.16■■□□□ 1.62
CACNB3-210ENST00000548874 MAP4K1Q92918 833 aa25.16■■□□□ 1.62
CACNB3-210ENST00000548874 TRPM7Q96QT4 1865 aa25.16■■□□□ 1.62
CACNB3-210ENST00000548874 SMIM22K7EJ46 135 aa25.15■■□□□ 1.62
CACNB3-210ENST00000548874 GABPAQ06546 454 aa25.15■■□□□ 1.62
CACNB3-210ENST00000548874 C8orf34Q49A92 452 aa25.15■■□□□ 1.62
CACNB3-210ENST00000548874 CST9Q5W186 159 aa25.15■■□□□ 1.62
CACNB3-210ENST00000548874 AMOTL1Q8IY63 956 aa25.15■■□□□ 1.62
CACNB3-210ENST00000548874 ANO2Q9NQ90 1003 aa25.15■■□□□ 1.62
CACNB3-210ENST00000548874 HERC5Q9UII4 1024 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms