RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TRIM27P14373 513 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 TCP10Q12799 353 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 TFCP2Q12800 502 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 VGLL4Q14135 290 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 DIXDC1Q155Q3 683 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 CCDC102BQ68D86 513 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 OTUD7BQ6GQQ9 843 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.31□□□□□ -1.08
SCAF11-211ENST00000547950 MIGA2Q7L4E1 593 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 NEUROD6Q96NK8 337 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 PTPN18Q99952 460 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 USP40Q9NVE5 1235 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 DENND2AQ9ULE3 1009 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 CSADQ9Y600 493 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 POLR2AP24928 1970 aaKnown RBP8.31□□□□□ -1.08
SCAF11-211ENST00000547950 SSC5DA1L4H1 1573 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 A0A1B0GUL7 405 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 PRDX5P30044 214 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 RGS19P49795 217 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 SOX10P56693 466 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 G3BP1Q13283 466 aaKnown RBP eCLIP8.3□□□□□ -1.08
SCAF11-211ENST00000547950 PKN2Q16513 984 aaKnown RBP8.3□□□□□ -1.08
SCAF11-211ENST00000547950 GORABQ5T7V8 394 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 FKBP1CQ5VVH2 108 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 ZKSCAN2Q63HK3 967 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 CDC42EP5Q6NZY7 148 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 FAM83AQ86UY5 434 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 TMEM57Q8N5G2 664 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.3□□□□□ -1.08
SCAF11-211ENST00000547950 ZKSCAN4Q969J2 545 aaPredicted RBP8.3□□□□□ -1.08
SCAF11-211ENST00000547950 HOOK2Q96ED9 719 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 XAGE2Q96GT9 111 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 WRNIP1Q96S55 665 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 ABCF2Q9UG63 623 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 HPS5Q9UPZ3 1129 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 AKAP2Q9Y2D5 859 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 DAGLAQ9Y4D2 1042 aa8.3□□□□□ -1.08
SCAF11-211ENST00000547950 SEMA3EO15041 775 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 GTF2A2P52657 109 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 NFIAQ12857 509 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 CRHR2Q13324 411 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 MTX1Q13505 466 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 RASGRF1Q13972 1273 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 NOM1Q5C9Z4 860 aaKnown RBP8.29□□□□□ -1.08
SCAF11-211ENST00000547950 ZFPM1Q8IX07 1006 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 FAM151AQ8WW52 585 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 CFHR5Q9BXR6 569 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.29□□□□□ -1.08
SCAF11-211ENST00000547950 CACNA1FO60840 1977 aa8.29□□□□□ -1.08
SCAF11-211ENST00000547950 CCL15-CCL14A0A0B4J2E2 113 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 PNMA6EA0A0J9YXQ4 647 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 TESPA1A2RU30 521 aaPredicted RBP8.28□□□□□ -1.08
SCAF11-211ENST00000547950 MVPQ14764 893 aaKnown RBP8.28□□□□□ -1.08
SCAF11-211ENST00000547950 CCL15Q16663 113 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 DCAF15Q66K64 600 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 FBXO46Q6PJ61 603 aaPredicted RBP8.28□□□□□ -1.08
SCAF11-211ENST00000547950 DZIP1Q86YF9 867 aaKnown RBP8.28□□□□□ -1.08
SCAF11-211ENST00000547950 FTSJ3Q8IY81 847 aaKnown RBP8.28□□□□□ -1.08
SCAF11-211ENST00000547950 ZGPATQ8N5A5 531 aaKnown RBP8.28□□□□□ -1.08
SCAF11-211ENST00000547950 BRI3BPQ8WY22 251 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 ZNF341Q9BYN7 854 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 FAM198AQ9UFP1 575 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 LHX6Q9UPM6 363 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 TRIM17Q9Y577 477 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 PSME4Q14997 1843 aa8.28□□□□□ -1.08
SCAF11-211ENST00000547950 SPDYE5A6NIY4 337 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 IRF6O14896 467 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 SLC34A2O95436 690 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 INPP5BP32019 993 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 ATP8B2P98198 1209 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 SP3Q02447 781 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 OS9Q13438 667 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-211ENST00000547950 SPTY2D1Q68D10 685 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-211ENST00000547950 TBC1D9Q6ZT07 1266 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 ERICH6Q7L0X2 663 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 ERO1BQ86YB8 467 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 ITPRIPQ8IWB1 547 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-211ENST00000547950 SLF2Q8IX21 1173 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 FAM43AQ8N2R8 423 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 CD99L2Q8TCZ2 262 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 RNF166Q96A37 237 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-211ENST00000547950 C1orf115Q9H7X2 142 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 ZFYVE28Q9HCC9 887 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 HMG20BQ9P0W2 317 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 SNCAIPQ9Y6H5 919 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 SALL1Q9NSC2 1324 aa8.27□□□□□ -1.09
SCAF11-211ENST00000547950 CASP8AP2Q9UKL3 1982 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 SURF6O75683 361 aaKnown RBP8.26□□□□□ -1.09
SCAF11-211ENST00000547950 WDHD1O75717 1129 aaPredicted RBP8.26□□□□□ -1.09
SCAF11-211ENST00000547950 CETPP11597 493 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 BTDP43251 543 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 RGS3P49796 1198 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 MECOMQ03112 1051 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 SNAPC2Q13487 334 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 PICALMQ13492 652 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 TAF1CQ15572 869 aaPredicted RBP8.26□□□□□ -1.09
SCAF11-211ENST00000547950 PI16Q6UXB8 463 aa8.26□□□□□ -1.09
SCAF11-211ENST00000547950 OTOP1Q7RTM1 612 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms