RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 NSUN4Q96CB9 384 aaKnown RBP12.7□□□□□ -0.38
BEST3-208ENST00000547208 HOOK2Q96ED9 719 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 DBNDD2Q9BQY9 259 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 DDX4Q9NQI0 724 aaKnown RBP12.7□□□□□ -0.38
BEST3-208ENST00000547208 ZNF112Q9UJU3 913 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 CSADQ9Y600 493 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 RBBP6Q7Z6E9 1792 aaKnown RBP12.69□□□□□ -0.38
BEST3-208ENST00000547208 MYH1P12882 1939 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 ENTPD3O75355 529 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 UQCRFS1P1P0C7P4 283 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 BTDP43251 543 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 RHBDL3P58872 404 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 CRHR2Q13324 411 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 DCAF15Q66K64 600 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 ERO1BQ86YB8 467 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 ZNF341Q9BYN7 854 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
BEST3-208ENST00000547208 DBNLQ9UJU6 430 aaKnown RBP12.69□□□□□ -0.38
BEST3-208ENST00000547208 MGAMO43451 1857 aa12.69□□□□□ -0.38
BEST3-208ENST00000547208 COL2A1P02458 1487 aaPredicted RBP12.68□□□□□ -0.38
BEST3-208ENST00000547208 FKTNO75072 461 aa12.68□□□□□ -0.38
BEST3-208ENST00000547208 GTF2A2P52657 109 aa12.68□□□□□ -0.38
BEST3-208ENST00000547208 MAP3K10Q02779 954 aa12.68□□□□□ -0.38
BEST3-208ENST00000547208 OS9Q13438 667 aaPredicted RBP12.68□□□□□ -0.38
BEST3-208ENST00000547208 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
BEST3-208ENST00000547208 EAF2Q96CJ1 260 aaPredicted RBP12.68□□□□□ -0.38
BEST3-208ENST00000547208 ZNF512BQ96KM6 892 aaPredicted RBP12.68□□□□□ -0.38
BEST3-208ENST00000547208 BRCA2P51587 3418 aa12.68□□□□□ -0.38
BEST3-208ENST00000547208 LOC285556D6RIA3 1793 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 CENPFP49454 3210 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 MYH7P12883 1935 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 CCL15-CCL14A0A0B4J2E2 113 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 DDTLA6NHG4 134 aaPredicted RBP12.67□□□□□ -0.38
BEST3-208ENST00000547208 PHF20L1A8MW92 1017 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 IRF6O14896 467 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
BEST3-208ENST00000547208 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 CAP1Q01518 475 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 PPIL2Q13356 520 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 CCL15Q16663 113 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 NOL9Q5SY16 702 aaKnown RBP12.67□□□□□ -0.38
BEST3-208ENST00000547208 PRPF38BQ5VTL8 546 aaKnown RBP12.67□□□□□ -0.38
BEST3-208ENST00000547208 SIRT2Q8IXJ6 389 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 FAM43AQ8N2R8 423 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 RCAN3Q9UKA8 241 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 EXOC6BQ9Y2D4 811 aa12.67□□□□□ -0.38
BEST3-208ENST00000547208 DDX60LQ5H9U9 1706 aaKnown RBP12.67□□□□□ -0.38
BEST3-208ENST00000547208 MS4A1P11836 297 aa12.66□□□□□ -0.38
BEST3-208ENST00000547208 PPATQ06203 517 aa12.66□□□□□ -0.38
BEST3-208ENST00000547208 PKN2Q16513 984 aaKnown RBP12.66□□□□□ -0.38
BEST3-208ENST00000547208 TTC39AQ5SRH9 613 aa12.66□□□□□ -0.38
BEST3-208ENST00000547208 OTUD7BQ6GQQ9 843 aa12.66□□□□□ -0.38
BEST3-208ENST00000547208 CCDC8Q9H0W5 538 aaPredicted RBP12.66□□□□□ -0.38
BEST3-208ENST00000547208 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
BEST3-208ENST00000547208 COG6Q9Y2V7 657 aa12.66□□□□□ -0.38
BEST3-208ENST00000547208 LDHCP07864 332 aa12.65□□□□□ -0.38
BEST3-208ENST00000547208 CETPP11597 493 aa12.65□□□□□ -0.38
BEST3-208ENST00000547208 GSTO1P78417 241 aa12.65□□□□□ -0.38
BEST3-208ENST00000547208 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
BEST3-208ENST00000547208 PICALMQ13492 652 aa12.65□□□□□ -0.38
BEST3-208ENST00000547208 MOGSQ13724 837 aa12.65□□□□□ -0.38
BEST3-208ENST00000547208 CCDC158Q5M9N0 1113 aa12.65□□□□□ -0.38
BEST3-208ENST00000547208 ADGRA1Q86SQ6 560 aa12.65□□□□□ -0.38
BEST3-208ENST00000547208 KCNH4Q9UQ05 1017 aa12.65□□□□□ -0.38
BEST3-208ENST00000547208 KIAA0100Q14667 2235 aaKnown RBP12.64□□□□□ -0.39
BEST3-208ENST00000547208 POTEFA5A3E0 1075 aa12.64□□□□□ -0.39
BEST3-208ENST00000547208 BTBD19C9JJ37 291 aa12.64□□□□□ -0.39
BEST3-208ENST00000547208 MAP4K4O95819 1239 aaPredicted RBP12.64□□□□□ -0.39
BEST3-208ENST00000547208 ZAP70P43403 619 aa12.64□□□□□ -0.39
BEST3-208ENST00000547208 SNAPC2Q13487 334 aa12.64□□□□□ -0.39
BEST3-208ENST00000547208 C20orf194Q5TEA3 1177 aa12.64□□□□□ -0.39
BEST3-208ENST00000547208 FBXO46Q6PJ61 603 aaPredicted RBP12.64□□□□□ -0.39
BEST3-208ENST00000547208 OTOP1Q7RTM1 612 aa12.64□□□□□ -0.39
BEST3-208ENST00000547208 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.64□□□□□ -0.39
BEST3-208ENST00000547208 ZCCHC17Q9NP64 241 aaKnown RBP12.64□□□□□ -0.39
BEST3-208ENST00000547208 PIH1D3Q9NQM4 214 aaKnown RBP12.64□□□□□ -0.39
BEST3-208ENST00000547208 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
BEST3-208ENST00000547208 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
BEST3-208ENST00000547208 NAV1Q8NEY1 1877 aa12.63□□□□□ -0.39
BEST3-208ENST00000547208 TAF1CQ15572 869 aaPredicted RBP12.63□□□□□ -0.39
BEST3-208ENST00000547208 ERC1Q8IUD2 1116 aa12.63□□□□□ -0.39
BEST3-208ENST00000547208 ZSCAN29Q8IWY8 852 aaPredicted RBP12.63□□□□□ -0.39
BEST3-208ENST00000547208 RPAP2Q8IXW5 612 aaPredicted RBP12.63□□□□□ -0.39
BEST3-208ENST00000547208 SCYL3Q8IZE3 742 aa12.63□□□□□ -0.39
BEST3-208ENST00000547208 CD99L2Q8TCZ2 262 aa12.63□□□□□ -0.39
BEST3-208ENST00000547208 SH3RF3Q8TEJ3 882 aaPredicted RBP12.63□□□□□ -0.39
BEST3-208ENST00000547208 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
BEST3-208ENST00000547208 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 TBC1D12O60347 775 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 IGSF3O75054 1194 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 PPP4CP60510 307 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 SP3Q02447 781 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 NAA16Q6N069 864 aaPredicted RBP12.62□□□□□ -0.39
BEST3-208ENST00000547208 AACSQ86V21 672 aa12.62□□□□□ -0.39
BEST3-208ENST00000547208 RHPN1Q8TCX5 695 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms