RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 RPGRQ92834 1020 aaKnown RBP14.78□□□□□ -0.04
SCAF11-209ENST00000547018 LY9Q9HBG7 655 aa14.78□□□□□ -0.04
SCAF11-209ENST00000547018 CBX8Q9HC52 389 aa14.78□□□□□ -0.04
SCAF11-209ENST00000547018 GOLGA6L19H0YKK7 550 aa14.77□□□□□ -0.04
SCAF11-209ENST00000547018 RAD21O60216 631 aa14.77□□□□□ -0.04
SCAF11-209ENST00000547018 LETM1O95202 739 aaPredicted RBP14.77□□□□□ -0.04
SCAF11-209ENST00000547018 NDUFA8P51970 172 aa14.77□□□□□ -0.04
SCAF11-209ENST00000547018 SSRP1Q08945 709 aaKnown RBP14.77□□□□□ -0.04
SCAF11-209ENST00000547018 IGDCC4Q8TDY8 1250 aa14.77□□□□□ -0.04
SCAF11-209ENST00000547018 SPTLC2O15270 562 aa14.77□□□□□ -0.04
SCAF11-209ENST00000547018 MYSM1Q5VVJ2 828 aa14.77□□□□□ -0.04
SCAF11-209ENST00000547018 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.04
SCAF11-209ENST00000547018 ZNF804BA4D1E1 1349 aa14.77□□□□□ -0.05
SCAF11-209ENST00000547018 USP17L8P0C7I0 530 aa14.77□□□□□ -0.05
SCAF11-209ENST00000547018 USP5P45974 858 aa14.77□□□□□ -0.05
SCAF11-209ENST00000547018 DYNLL2Q96FJ2 89 aa14.77□□□□□ -0.05
SCAF11-209ENST00000547018 CCDC39Q9UFE4 941 aa14.77□□□□□ -0.05
SCAF11-209ENST00000547018 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.05
SCAF11-209ENST00000547018 GRIK5Q16478 980 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-209ENST00000547018 DDX19AQ9NUU7 478 aaKnown RBP14.76□□□□□ -0.05
SCAF11-209ENST00000547018 VPS54Q9P1Q0 977 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 NRBP1Q9UHY1 535 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 PLEKHG2Q9H7P9 1386 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 TNKSO95271 1327 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 C11orf57Q6ZUT1 292 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-209ENST00000547018 FILIP1Q7Z7B0 1213 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 AGXT2Q9BYV1 514 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 CLSTN2Q9H4D0 955 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 KIAA2012Q0VF49 1180 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 UBE4AQ14139 1066 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 TRIM22Q8IYM9 498 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 SLC44A5Q8NCS7 719 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 NYXQ9GZU5 481 aa14.76□□□□□ -0.05
SCAF11-209ENST00000547018 V9GY48 417 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-209ENST00000547018 UFL1O94874 794 aa14.75□□□□□ -0.05
SCAF11-209ENST00000547018 ZNF384Q8TF68 577 aa14.75□□□□□ -0.05
SCAF11-209ENST00000547018 LRP6O75581 1613 aa14.75□□□□□ -0.05
SCAF11-209ENST00000547018 TSPY2A6NKD2 308 aa14.75□□□□□ -0.05
SCAF11-209ENST00000547018 IFIT1BQ5T764 474 aaKnown RBP14.75□□□□□ -0.05
SCAF11-209ENST00000547018 MAPKAPK5Q8IW41 473 aa14.75□□□□□ -0.05
SCAF11-209ENST00000547018 FAM200AQ8TCP9 573 aa14.75□□□□□ -0.05
SCAF11-209ENST00000547018 KRT23Q9C075 422 aa14.75□□□□□ -0.05
SCAF11-209ENST00000547018 FAM205CA6NFA0 338 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 KIF23Q02241 960 aaPredicted RBP14.74□□□□□ -0.05
SCAF11-209ENST00000547018 ZNF654Q8IZM8 581 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 OXER1Q8TDS5 423 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 CPVLQ9H3G5 476 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 BCL9LQ86UU0 1499 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 ZMYM6O95789 1325 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 SAFBQ15424 915 aaKnown RBP eCLIP14.74□□□□□ -0.05
SCAF11-209ENST00000547018 ANO1Q5XXA6 986 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 TGFBRAP1Q8WUH2 860 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 MRPS27Q92552 414 aaKnown RBP14.74□□□□□ -0.05
SCAF11-209ENST00000547018 RCOR1Q9UKL0 485 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 STX8Q9UNK0 236 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 COL4A1P02462 1669 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 PLEKHA8P1O95397 391 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 PTGS1P23219 599 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 SF3B3Q15393 1217 aaKnown RBP14.74□□□□□ -0.05
SCAF11-209ENST00000547018 DIS3L2Q8IYB7 885 aaKnown RBP14.74□□□□□ -0.05
SCAF11-209ENST00000547018 ESR2Q92731 530 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 CABP5Q9NP86 173 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 ZKSCAN5Q9Y2L8 839 aa14.74□□□□□ -0.05
SCAF11-209ENST00000547018 CDKL5O76039 1030 aa14.73□□□□□ -0.05
SCAF11-209ENST00000547018 LRMPQ12912 555 aa14.73□□□□□ -0.05
SCAF11-209ENST00000547018 CREBRFQ8IUR6 639 aa14.73□□□□□ -0.05
SCAF11-209ENST00000547018 PDLIM2Q96JY6 352 aa14.73□□□□□ -0.05
SCAF11-209ENST00000547018 TMEM87BQ96K49 555 aa14.73□□□□□ -0.05
SCAF11-209ENST00000547018 LINC00301Q8NCQ3 95 aa14.73□□□□□ -0.05
SCAF11-209ENST00000547018 ELP1O95163 1332 aa14.73□□□□□ -0.05
SCAF11-209ENST00000547018 WDHD1O75717 1129 aaPredicted RBP14.72□□□□□ -0.05
SCAF11-209ENST00000547018 RBM10P98175 930 aaKnown RBP14.72□□□□□ -0.05
SCAF11-209ENST00000547018 PICALMQ13492 652 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 CCDC186Q7Z3E2 898 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 IQCA1Q86XH1 822 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 AOPEPQ8N6M6 819 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 ZNF512BQ96KM6 892 aaPredicted RBP14.72□□□□□ -0.05
SCAF11-209ENST00000547018 MKNK2Q9HBH9 465 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 FAM217BQ9NTX9 383 aaPredicted RBP14.72□□□□□ -0.05
SCAF11-209ENST00000547018 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
SCAF11-209ENST00000547018 G3V3G9 751 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 DCAF8Q5TAQ9 597 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 FANCBQ8NB91 859 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 CNNM2Q9H8M5 875 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 VAT1LQ9HCJ6 419 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 AKAP11Q9UKA4 1901 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 LDHBP07195 334 aaKnown RBP14.72□□□□□ -0.05
SCAF11-209ENST00000547018 FAM160A1Q05DH4 1040 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 RASGRP2Q7LDG7 609 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 NSUN4Q96CB9 384 aaKnown RBP14.72□□□□□ -0.05
SCAF11-209ENST00000547018 SALL1Q9NSC2 1324 aa14.72□□□□□ -0.05
SCAF11-209ENST00000547018 SERPINB2P05120 415 aa14.71□□□□□ -0.05
SCAF11-209ENST00000547018 GRIN1Q05586 938 aa14.71□□□□□ -0.05
SCAF11-209ENST00000547018 ENAHQ8N8S7 591 aaPredicted RBP14.71□□□□□ -0.05
SCAF11-209ENST00000547018 TSC1Q92574 1164 aa14.71□□□□□ -0.05
SCAF11-209ENST00000547018 STAMQ92783 540 aa14.71□□□□□ -0.05
SCAF11-209ENST00000547018 FUCA2Q9BTY2 467 aa14.71□□□□□ -0.05
SCAF11-209ENST00000547018 MXD3Q9BW11 206 aa14.71□□□□□ -0.05
SCAF11-209ENST00000547018 RNF41Q9H4P4 317 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms