RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 IREB2P48200 963 aaKnown RBP17.47■□□□□ 0.39
DDX54-203ENST00000546869 TCP10Q12799 353 aa17.47■□□□□ 0.39
DDX54-203ENST00000546869 CDAN1Q8IWY9 1227 aa17.47■□□□□ 0.39
DDX54-203ENST00000546869 CCDC136Q96JN2 1154 aa17.47■□□□□ 0.39
DDX54-203ENST00000546869 SSC5DA1L4H1 1573 aa17.47■□□□□ 0.39
DDX54-203ENST00000546869 PAPPA2Q9BXP8 1791 aa17.47■□□□□ 0.39
DDX54-203ENST00000546869 MYO5AQ9Y4I1 1855 aaKnown RBP17.47■□□□□ 0.39
DDX54-203ENST00000546869 TBC1D12O60347 775 aa17.46■□□□□ 0.39
DDX54-203ENST00000546869 PICALMQ13492 652 aa17.46■□□□□ 0.39
DDX54-203ENST00000546869 DCAF15Q66K64 600 aa17.46■□□□□ 0.39
DDX54-203ENST00000546869 RGMBQ6NW40 437 aa17.46■□□□□ 0.39
DDX54-203ENST00000546869 SH3BP5LQ7L8J4 393 aa17.46■□□□□ 0.39
DDX54-203ENST00000546869 TGFBRAP1Q8WUH2 860 aa17.46■□□□□ 0.39
DDX54-203ENST00000546869 APPBP2Q92624 585 aa17.46■□□□□ 0.39
DDX54-203ENST00000546869 KLRG1Q96E93 195 aa17.46■□□□□ 0.39
DDX54-203ENST00000546869 MKRN1Q9UHC7 482 aaKnown RBP17.46■□□□□ 0.39
DDX54-203ENST00000546869 DDTLA6NHG4 134 aaPredicted RBP17.45■□□□□ 0.38
DDX54-203ENST00000546869 ECE1P42892 770 aa17.45■□□□□ 0.38
DDX54-203ENST00000546869 CCDC102AQ96A19 550 aa17.45■□□□□ 0.38
DDX54-203ENST00000546869 FSD1Q9BTV5 496 aa17.45■□□□□ 0.38
DDX54-203ENST00000546869 CRNKL1Q9BZJ0 848 aaKnown RBP17.45■□□□□ 0.38
DDX54-203ENST00000546869 PUS7LQ9H0K6 701 aaKnown RBP17.45■□□□□ 0.38
DDX54-203ENST00000546869 PPP4R2Q9NY27 417 aa17.45■□□□□ 0.38
DDX54-203ENST00000546869 ZNF112Q9UJU3 913 aa17.45■□□□□ 0.38
DDX54-203ENST00000546869 ANGEL1Q9UNK9 670 aaKnown RBP17.45■□□□□ 0.38
DDX54-203ENST00000546869 FLT1P17948 1338 aa17.45■□□□□ 0.38
DDX54-203ENST00000546869 UBE2Q2LH0YL09 131 aa17.44■□□□□ 0.38
DDX54-203ENST00000546869 TTLL12Q14166 644 aaPredicted RBP17.44■□□□□ 0.38
DDX54-203ENST00000546869 MOB2Q70IA6 237 aa17.44■□□□□ 0.38
DDX54-203ENST00000546869 METTL16Q86W50 562 aaKnown RBP17.44■□□□□ 0.38
DDX54-203ENST00000546869 ANKRD13AQ8IZ07 590 aa17.44■□□□□ 0.38
DDX54-203ENST00000546869 CSRNP1Q96S65 589 aa17.44■□□□□ 0.38
DDX54-203ENST00000546869 CHGBP05060 677 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 USP5P45974 858 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 VEGFBP49765 207 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 MAP3K9P80192 1104 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 SLFNL1Q499Z3 407 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 ZMYM1Q5SVZ6 1142 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 FOXP4Q8IVH2 680 aaPredicted RBP17.43■□□□□ 0.38
DDX54-203ENST00000546869 LCORLQ8N3X6 602 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.43■□□□□ 0.38
DDX54-203ENST00000546869 OSBP2Q969R2 916 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 AIDAQ96BJ3 306 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 STRBPQ96SI9 672 aaKnown RBP17.43■□□□□ 0.38
DDX54-203ENST00000546869 ZNF341Q9BYN7 854 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 ATP8A2Q9NTI2 1148 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 PI4KBQ9UBF8 816 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 TAOK2Q9UL54 1235 aa17.43■□□□□ 0.38
DDX54-203ENST00000546869 TRIM6-TRIM34B2RNG4 842 aa17.42■□□□□ 0.38
DDX54-203ENST00000546869 MBD4O95243 580 aa17.42■□□□□ 0.38
DDX54-203ENST00000546869 PRKG1Q13976 671 aa17.42■□□□□ 0.38
DDX54-203ENST00000546869 TTC22Q5TAA0 569 aa17.42■□□□□ 0.38
DDX54-203ENST00000546869 MAPKAPK5Q8IW41 473 aa17.42■□□□□ 0.38
DDX54-203ENST00000546869 ZSCAN29Q8IWY8 852 aaPredicted RBP17.42■□□□□ 0.38
DDX54-203ENST00000546869 JMYQ8N9B5 988 aa17.42■□□□□ 0.38
DDX54-203ENST00000546869 ARMT1Q9H993 441 aa17.42■□□□□ 0.38
DDX54-203ENST00000546869 HERC5Q9UII4 1024 aaKnown RBP17.42■□□□□ 0.38
DDX54-203ENST00000546869 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
DDX54-203ENST00000546869 FAM155AB1AL88 458 aaPredicted RBP17.41■□□□□ 0.38
DDX54-203ENST00000546869 GNAT2P19087 354 aa17.41■□□□□ 0.38
DDX54-203ENST00000546869 MAP2K2P36507 400 aa17.41■□□□□ 0.38
DDX54-203ENST00000546869 ZNF157P51786 506 aaPredicted RBP17.41■□□□□ 0.38
DDX54-203ENST00000546869 GIMAP6Q6P9H5 292 aa17.41■□□□□ 0.38
DDX54-203ENST00000546869 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.41■□□□□ 0.38
DDX54-203ENST00000546869 MIGA2Q7L4E1 593 aa17.41■□□□□ 0.38
DDX54-203ENST00000546869 CAPNS2Q96L46 248 aa17.41■□□□□ 0.38
DDX54-203ENST00000546869 DCP1AQ9NPI6 582 aaPredicted RBP17.41■□□□□ 0.38
DDX54-203ENST00000546869 HELLSQ9NRZ9 838 aa17.41■□□□□ 0.38
DDX54-203ENST00000546869 FZD1Q9UP38 647 aa17.41■□□□□ 0.38
DDX54-203ENST00000546869 PHF20L1A8MW92 1017 aa17.4■□□□□ 0.38
DDX54-203ENST00000546869 SLC10A3P09131 477 aa17.4■□□□□ 0.38
DDX54-203ENST00000546869 NOGQ13253 232 aa17.4■□□□□ 0.38
DDX54-203ENST00000546869 CYP4F22Q6NT55 531 aa17.4■□□□□ 0.38
DDX54-203ENST00000546869 TTC6Q86TZ1 520 aa17.4■□□□□ 0.38
DDX54-203ENST00000546869 RILPL2Q969X0 211 aa17.4■□□□□ 0.38
DDX54-203ENST00000546869 SLC10A4Q96EP9 437 aa17.4■□□□□ 0.38
DDX54-203ENST00000546869 EHD4Q9H223 541 aa17.4■□□□□ 0.38
DDX54-203ENST00000546869 HIP1O00291 1037 aa17.39■□□□□ 0.37
DDX54-203ENST00000546869 HLA-DOAP06340 250 aa17.39■□□□□ 0.37
DDX54-203ENST00000546869 NOL9Q5SY16 702 aaKnown RBP17.39■□□□□ 0.37
DDX54-203ENST00000546869 REM2Q8IYK8 340 aaPredicted RBP17.39■□□□□ 0.37
DDX54-203ENST00000546869 PALD1Q9ULE6 856 aa17.39■□□□□ 0.37
DDX54-203ENST00000546869 SLC4A4Q9Y6R1 1079 aa17.39■□□□□ 0.37
DDX54-203ENST00000546869 FOCADQ5VW36 1801 aa17.38■□□□□ 0.37
DDX54-203ENST00000546869 GPAA1O43292 621 aa17.38■□□□□ 0.37
DDX54-203ENST00000546869 PRKAB2O43741 272 aa17.38■□□□□ 0.37
DDX54-203ENST00000546869 CTNND1O60716 968 aaKnown RBP17.38■□□□□ 0.37
DDX54-203ENST00000546869 ZBTB48P10074 688 aaPredicted RBP17.38■□□□□ 0.37
DDX54-203ENST00000546869 GSPT1P15170 499 aaKnown RBP17.38■□□□□ 0.37
DDX54-203ENST00000546869 SDSP20132 328 aa17.38■□□□□ 0.37
DDX54-203ENST00000546869 RASAL3Q86YV0 1011 aa17.38■□□□□ 0.37
DDX54-203ENST00000546869 SDR42E1Q8WUS8 393 aa17.38■□□□□ 0.37
DDX54-203ENST00000546869 WRNIP1Q96S55 665 aa17.38■□□□□ 0.37
DDX54-203ENST00000546869 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDX54-203ENST00000546869 CSADQ9Y600 493 aa17.38■□□□□ 0.37
DDX54-203ENST00000546869 MYH7P12883 1935 aa17.38■□□□□ 0.37
DDX54-203ENST00000546869 GSG1L2A8MUP6 293 aa17.37■□□□□ 0.37
DDX54-203ENST00000546869 PATL2C9JE40 543 aaKnown RBP17.37■□□□□ 0.37
DDX54-203ENST00000546869 M0R2C6 588 aa17.37■□□□□ 0.37
DDX54-203ENST00000546869 VGLL4Q14135 290 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms