RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 XAGE2Q96GT9 111 aa9□□□□□ -0.97
CCDC60-205ENST00000546345 ESYT1Q9BSJ8 1104 aa9□□□□□ -0.97
CCDC60-205ENST00000546345 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
CCDC60-205ENST00000546345 GPRC5DQ9NZD1 345 aa9□□□□□ -0.97
CCDC60-205ENST00000546345 RANBP2P49792 3224 aaKnown RBP8.99□□□□□ -0.97
CCDC60-205ENST00000546345 A0A087WZG4 1122 aa8.99□□□□□ -0.97
CCDC60-205ENST00000546345 ZBTB7BO15156 539 aaPredicted RBP8.99□□□□□ -0.97
CCDC60-205ENST00000546345 TNNT2P45379 298 aaPredicted RBP8.99□□□□□ -0.97
CCDC60-205ENST00000546345 GDF10P55107 478 aa8.99□□□□□ -0.97
CCDC60-205ENST00000546345 AKAP4Q5JQC9 854 aa8.99□□□□□ -0.97
CCDC60-205ENST00000546345 CTU1Q7Z7A3 348 aaKnown RBP8.99□□□□□ -0.97
CCDC60-205ENST00000546345 LARGE2Q8N3Y3 721 aa8.99□□□□□ -0.97
CCDC60-205ENST00000546345 ETNK1Q9HBU6 452 aa8.99□□□□□ -0.97
CCDC60-205ENST00000546345 PGAP2Q9UHJ9 254 aa8.99□□□□□ -0.97
CCDC60-205ENST00000546345 FIGNL2A6NMB9 653 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 MAN1A2O60476 641 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 STAU1O95793 577 aaKnown RBP8.98□□□□□ -0.97
CCDC60-205ENST00000546345 IL2RAP01589 272 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 INHAP05111 366 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 IL6STP40189 918 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-205ENST00000546345 RNF144AP50876 292 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-205ENST00000546345 HIRAP54198 1017 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-205ENST00000546345 EIF6P56537 245 aaKnown RBP8.98□□□□□ -0.97
CCDC60-205ENST00000546345 CLDN10P78369 228 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 CCDC102BQ68D86 513 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 SULT6B1Q6IMI4 303 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 NBPF15Q8N660 670 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 TRPM4Q8TD43 1214 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 ZNF496Q96IT1 587 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-205ENST00000546345 SETDB2Q96T68 719 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 ZNF408Q9H9D4 720 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 ADARB2Q9NS39 739 aaKnown RBP8.98□□□□□ -0.97
CCDC60-205ENST00000546345 RNF186Q9NXI6 227 aa8.98□□□□□ -0.97
CCDC60-205ENST00000546345 RBM19Q9Y4C8 960 aaKnown RBP8.98□□□□□ -0.97
CCDC60-205ENST00000546345 COL4A1P02462 1669 aa8.97□□□□□ -0.97
CCDC60-205ENST00000546345 SHTN1A0MZ66 631 aa8.97□□□□□ -0.97
CCDC60-205ENST00000546345 TRPA1O75762 1119 aa8.97□□□□□ -0.97
CCDC60-205ENST00000546345 SNRPBP14678 240 aaKnown RBP8.97□□□□□ -0.97
CCDC60-205ENST00000546345 GPC1P35052 558 aa8.97□□□□□ -0.97
CCDC60-205ENST00000546345 HUNKP57058 714 aa8.97□□□□□ -0.97
CCDC60-205ENST00000546345 CENPCQ03188 943 aa8.97□□□□□ -0.97
CCDC60-205ENST00000546345 CRY2Q49AN0 593 aa8.97□□□□□ -0.97
CCDC60-205ENST00000546345 JDP2Q8WYK2 163 aa8.97□□□□□ -0.97
CCDC60-205ENST00000546345 NPC1L1Q9UHC9 1359 aa8.97□□□□□ -0.97
CCDC60-205ENST00000546345 DLG5Q8TDM6 1919 aa8.96□□□□□ -0.97
CCDC60-205ENST00000546345 TMEM229AB2RXF0 380 aa8.96□□□□□ -0.98
CCDC60-205ENST00000546345 A1BGP04217 495 aa8.96□□□□□ -0.98
CCDC60-205ENST00000546345 KIF23Q02241 960 aaPredicted RBP8.96□□□□□ -0.98
CCDC60-205ENST00000546345 FOXD4L5Q5VV16 416 aaPredicted RBP8.96□□□□□ -0.98
CCDC60-205ENST00000546345 NBPF5PQ86XG9 351 aaPredicted RBP8.96□□□□□ -0.98
CCDC60-205ENST00000546345 TPCN2Q8NHX9 752 aa8.96□□□□□ -0.98
CCDC60-205ENST00000546345 ZNF594Q96JF6 807 aaPredicted RBP8.96□□□□□ -0.98
CCDC60-205ENST00000546345 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-205ENST00000546345 FAM196BA6NMK8 535 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 BACH1O14867 736 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 NPHP1O15259 732 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 STARD3NLO95772 234 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 IL13P35225 146 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 PIP4K2AP48426 406 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-205ENST00000546345 GMPSP49915 693 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-205ENST00000546345 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.95□□□□□ -0.98
CCDC60-205ENST00000546345 RGMBQ6NW40 437 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC60-205ENST00000546345 RNF217Q8TC41 542 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 ARID3AQ99856 593 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 SERTAD1Q9UHV2 236 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 DNMT3LQ9UJW3 386 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 KIAA1024Q9UPX6 916 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 ZSWIM8A7E2V4 1837 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 CDHR2Q9BYE9 1310 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 COL3A1P02461 1466 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-205ENST00000546345 LAMA3Q16787 3333 aa8.95□□□□□ -0.98
CCDC60-205ENST00000546345 SOBPA7XYQ1 873 aa8.94□□□□□ -0.98
CCDC60-205ENST00000546345 GTF2E1P29083 439 aaPredicted RBP8.94□□□□□ -0.98
CCDC60-205ENST00000546345 CXCL9Q07325 125 aa8.94□□□□□ -0.98
CCDC60-205ENST00000546345 PTK7Q13308 1070 aa8.94□□□□□ -0.98
CCDC60-205ENST00000546345 CRTC2Q53ET0 693 aaPredicted RBP8.94□□□□□ -0.98
CCDC60-205ENST00000546345 LYSMD3Q7Z3D4 306 aa8.94□□□□□ -0.98
CCDC60-205ENST00000546345 SIX5Q8N196 739 aa8.94□□□□□ -0.98
CCDC60-205ENST00000546345 CCER1Q8TC90 406 aaPredicted RBP8.94□□□□□ -0.98
CCDC60-205ENST00000546345 PBXIP1Q96AQ6 731 aa8.94□□□□□ -0.98
CCDC60-205ENST00000546345 CSRNP1Q96S65 589 aa8.94□□□□□ -0.98
CCDC60-205ENST00000546345 ZSCAN10Q96SZ4 725 aaPredicted RBP8.94□□□□□ -0.98
CCDC60-205ENST00000546345 GRIP2Q9C0E4 1043 aa8.94□□□□□ -0.98
CCDC60-205ENST00000546345 HRH3Q9Y5N1 445 aa8.94□□□□□ -0.98
CCDC60-205ENST00000546345 A0A0C4DFX4 3053 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L15C9J2P7 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L10C9JJH3 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L13C9JLJ4 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L12C9JPN9 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L11C9JVI0 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L21D6R901 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L18D6R9N7 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L22D6RA61 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L17D6RBQ6 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L19D6RCP7 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L20D6RJB6 530 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 EGFRP00533 1210 aa8.93□□□□□ -0.98
CCDC60-205ENST00000546345 USP17L24Q0WX57 530 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms