RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 PHACTR2O75167 634 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 IDEP14735 1019 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 FBXO38Q6PIJ6 1188 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 ERO1AQ96HE7 468 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 MRFAP1L1Q96HT8 127 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 TANGO6Q9C0B7 1094 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 ZSWIM5Q9P217 1185 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 KIF28PB7ZC32 967 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 ZPR1O75312 459 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 GOLGA8HP0CJ92 632 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 CTSWP56202 376 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 GSDMDP57764 484 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 FANCCQ00597 558 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 CATIPQ7Z7H3 387 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 FBXO18Q8NFZ0 1043 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 VPS16Q9H269 839 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 SERTAD1Q9UHV2 236 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 CARMIL3Q8ND23 1372 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 CLGNO14967 610 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 ZFYP08048 801 aaPredicted RBP11.2□□□□□ -0.62
TRAF1-203ENST00000546084 MATR3P43243 847 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAF1-203ENST00000546084 IQCB1Q15051 598 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 ANKRD18AQ8IVF6 992 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 GDAP1L1Q96MZ0 367 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 SH3TC1Q8TE82 1336 aa11.2□□□□□ -0.62
TRAF1-203ENST00000546084 USP17L12C9JPN9 530 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 USP17L21D6R901 530 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 GUCY1A2P33402 732 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 KIF4BQ2VIQ3 1234 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 ARHGAP29Q52LW3 1261 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 PIK3AP1Q6ZUJ8 805 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 HEATR3Q7Z4Q2 680 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 AMOTL1Q8IY63 956 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 CCDC12Q8WUD4 166 aaPredicted RBP11.19□□□□□ -0.62
TRAF1-203ENST00000546084 NUP88Q99567 741 aaPredicted RBP11.19□□□□□ -0.62
TRAF1-203ENST00000546084 ST7Q9NRC1 585 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 ARGLU1Q9NWB6 273 aaPredicted RBP11.19□□□□□ -0.62
TRAF1-203ENST00000546084 KIAA1468Q9P260 1216 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 USP42Q9H9J4 1324 aaKnown RBP11.19□□□□□ -0.62
TRAF1-203ENST00000546084 MAGEB6P1A0A0J9YX57 407 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 H7C1W4 665 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 KCNQ2O43526 872 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 NMT2O60551 498 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 CTDNEP1O95476 244 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 CDC27P30260 824 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 CCDC152Q4G0S7 254 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 IFNL3Q8IZI9 196 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 TTLL11Q8NHH1 800 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 PLCD4Q9BRC7 762 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 NFE2L3Q9Y4A8 694 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 PCDHA5Q9Y5H7 936 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 GOLGB1Q14789 3259 aaKnown RBP11.19□□□□□ -0.62
TRAF1-203ENST00000546084 GABPB1Q06547 395 aaPredicted RBP11.19□□□□□ -0.62
TRAF1-203ENST00000546084 RRAGBQ5VZM2 374 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 CAGE1Q8TC20 777 aa11.19□□□□□ -0.62
TRAF1-203ENST00000546084 FAM205CA6NFA0 338 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 KIF2AO00139 706 aaPredicted RBP11.18□□□□□ -0.62
TRAF1-203ENST00000546084 N4BP3O15049 544 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 RASGRF1Q13972 1273 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 TTF1Q15361 905 aaPredicted RBP11.18□□□□□ -0.62
TRAF1-203ENST00000546084 NLRP10Q86W26 655 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 ANKRD20A12PQ8NF67 263 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.62
TRAF1-203ENST00000546084 DSCC1Q9BVC3 393 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 PDE8BO95263 885 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 MCM6Q14566 821 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 FILIP1LQ4L180 1135 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 ZBTB38Q8NAP3 1195 aaPredicted RBP11.18□□□□□ -0.62
TRAF1-203ENST00000546084 IPO7O95373 1038 aaKnown RBP11.18□□□□□ -0.62
TRAF1-203ENST00000546084 RFX5P48382 616 aaPredicted RBP11.18□□□□□ -0.62
TRAF1-203ENST00000546084 EIF5P55010 431 aaKnown RBP11.18□□□□□ -0.62
TRAF1-203ENST00000546084 TMCO3Q6UWJ1 677 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 KCNB2Q92953 911 aa11.18□□□□□ -0.62
TRAF1-203ENST00000546084 ZBTB22O15209 634 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 BMS1Q14692 1282 aaKnown RBP11.17□□□□□ -0.62
TRAF1-203ENST00000546084 PUM3Q15397 648 aaKnown RBP11.17□□□□□ -0.62
TRAF1-203ENST00000546084 SUSD4Q5VX71 490 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 PSMB7Q99436 277 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 CARD6Q9BX69 1037 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 RCOR1Q9UKL0 485 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 TMEM232C9JQI7 657 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 GNPATO15228 680 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 PDE8AO60658 829 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 OXER1Q8TDS5 423 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 PPP1R1BQ9UD71 204 aaPredicted RBP11.17□□□□□ -0.62
TRAF1-203ENST00000546084 RICTORQ6R327 1708 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 CEMIPQ8WUJ3 1361 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 HEG1Q9ULI3 1381 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 USP49Q70CQ1 688 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 LINC00301Q8NCQ3 95 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 ESR2Q92731 530 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 RABEP2Q9H5N1 569 aa11.17□□□□□ -0.62
TRAF1-203ENST00000546084 NEDD4P46934 1319 aa11.16□□□□□ -0.62
TRAF1-203ENST00000546084 CCDC194A0A1B0GVG4 234 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms