RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 METTL24Q5JXM2 366 aa12.1□□□□□ -0.47
GABRB3-205ENST00000545868 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
GABRB3-205ENST00000545868 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
GABRB3-205ENST00000545868 PTPN22Q9Y2R2 807 aa12.1□□□□□ -0.47
GABRB3-205ENST00000545868 ALPK3Q96L96 1907 aa12.09□□□□□ -0.47
GABRB3-205ENST00000545868 FOCADQ5VW36 1801 aa12.09□□□□□ -0.47
GABRB3-205ENST00000545868 RPAP1Q9BWH6 1393 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-205ENST00000545868 APOBEC3HQ6NTF7 200 aaKnown RBP12.09□□□□□ -0.47
GABRB3-205ENST00000545868 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
GABRB3-205ENST00000545868 ERO1AQ96HE7 468 aa12.09□□□□□ -0.47
GABRB3-205ENST00000545868 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
GABRB3-205ENST00000545868 SIPA1L1O43166 1804 aa12.09□□□□□ -0.47
GABRB3-205ENST00000545868 TRIOBPQ9H2D6 2365 aa12.08□□□□□ -0.47
GABRB3-205ENST00000545868 RANBP2P49792 3224 aaKnown RBP12.08□□□□□ -0.48
GABRB3-205ENST00000545868 HDLBPQ00341 1268 aaKnown RBP12.08□□□□□ -0.48
GABRB3-205ENST00000545868 SP3Q02447 781 aa12.08□□□□□ -0.48
GABRB3-205ENST00000545868 ARMC5Q96C12 935 aa12.08□□□□□ -0.48
GABRB3-205ENST00000545868 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
GABRB3-205ENST00000545868 ZDHHC15Q96MV8 337 aa12.08□□□□□ -0.48
GABRB3-205ENST00000545868 EFCC1Q9HA90 598 aa12.08□□□□□ -0.48
GABRB3-205ENST00000545868 PCDHGA4Q9Y5G9 962 aa12.08□□□□□ -0.48
GABRB3-205ENST00000545868 PTPRCP08575 1304 aa12.08□□□□□ -0.48
GABRB3-205ENST00000545868 KIF16BQ96L93 1317 aa12.08□□□□□ -0.48
GABRB3-205ENST00000545868 CCL15-CCL14A0A0B4J2E2 113 aa12.07□□□□□ -0.48
GABRB3-205ENST00000545868 SPDYE5A6NIY4 337 aa12.07□□□□□ -0.48
GABRB3-205ENST00000545868 TAF1CQ15572 869 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-205ENST00000545868 CCL15Q16663 113 aa12.07□□□□□ -0.48
GABRB3-205ENST00000545868 ATG9AQ7Z3C6 839 aa12.07□□□□□ -0.48
GABRB3-205ENST00000545868 VPS37DQ86XT2 251 aa12.07□□□□□ -0.48
GABRB3-205ENST00000545868 TBC1D22AQ8WUA7 517 aa12.07□□□□□ -0.48
GABRB3-205ENST00000545868 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-205ENST00000545868 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
GABRB3-205ENST00000545868 LOC285556D6RIA3 1793 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 TNNI2P48788 182 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 GTF2A2P52657 109 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 SLFN5Q08AF3 891 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 PUM3Q15397 648 aaKnown RBP12.06□□□□□ -0.48
GABRB3-205ENST00000545868 CAVIN4Q5BKX8 364 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 OTUD7BQ6GQQ9 843 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 FAM83AQ86UY5 434 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 MRIQ9BWK5 157 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 ARHGAP39Q9C0H5 1083 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 PTCH2Q9Y6C5 1203 aa12.06□□□□□ -0.48
GABRB3-205ENST00000545868 BTBD19C9JJ37 291 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 EYA2O00167 538 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 IRF6O14896 467 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 FRAT2O75474 233 aaPredicted RBP12.05□□□□□ -0.48
GABRB3-205ENST00000545868 EN2P19622 333 aaPredicted RBP12.05□□□□□ -0.48
GABRB3-205ENST00000545868 INPP5BP32019 993 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 FKBP1CQ5VVH2 108 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 INTS3Q68E01 1043 aaKnown RBP12.05□□□□□ -0.48
GABRB3-205ENST00000545868 HHIPL2Q6UWX4 724 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 KRI1Q8N9T8 703 aaKnown RBP12.05□□□□□ -0.48
GABRB3-205ENST00000545868 CDCA7LQ96GN5 454 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 ZNF333Q96JL9 665 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 WRNIP1Q96S55 665 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 DAGLAQ9Y4D2 1042 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 CSADQ9Y600 493 aa12.05□□□□□ -0.48
GABRB3-205ENST00000545868 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 E9PSI1 815 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 CTGFP29279 349 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 PRDX5P30044 214 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 NFIAQ12857 509 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 DIXDC1Q155Q3 683 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 TMEM132AQ24JP5 1023 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 MIGA2Q7L4E1 593 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 ERO1BQ86YB8 467 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 SUGT1Q9Y2Z0 365 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 MAST2Q6P0Q8 1798 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 MAST3O60307 1309 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 ADGRA2Q96PE1 1338 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
GABRB3-205ENST00000545868 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
GABRB3-205ENST00000545868 PPIL2Q13356 520 aa12.03□□□□□ -0.48
GABRB3-205ENST00000545868 MOGSQ13724 837 aa12.03□□□□□ -0.48
GABRB3-205ENST00000545868 CDC42EP5Q6NZY7 148 aa12.03□□□□□ -0.48
GABRB3-205ENST00000545868 LPIN2Q92539 896 aa12.03□□□□□ -0.48
GABRB3-205ENST00000545868 SIL1Q9H173 461 aa12.03□□□□□ -0.48
GABRB3-205ENST00000545868 ZFYVE28Q9HCC9 887 aa12.03□□□□□ -0.48
GABRB3-205ENST00000545868 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
GABRB3-205ENST00000545868 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
GABRB3-205ENST00000545868 ATRNL1Q5VV63 1379 aa12.03□□□□□ -0.48
GABRB3-205ENST00000545868 MYH1P12882 1939 aa12.02□□□□□ -0.49
GABRB3-205ENST00000545868 TLR2O60603 784 aa12.02□□□□□ -0.49
GABRB3-205ENST00000545868 SLC5A1P13866 664 aa12.02□□□□□ -0.49
GABRB3-205ENST00000545868 PHKA1P46020 1223 aa12.02□□□□□ -0.49
GABRB3-205ENST00000545868 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
GABRB3-205ENST00000545868 ZFPM1Q8IX07 1006 aa12.02□□□□□ -0.49
GABRB3-205ENST00000545868 TRMT2AQ8IZ69 625 aaKnown RBP12.02□□□□□ -0.49
GABRB3-205ENST00000545868 TMOD2Q9NZR1 351 aa12.02□□□□□ -0.49
GABRB3-205ENST00000545868 ZNF112Q9UJU3 913 aa12.02□□□□□ -0.49
GABRB3-205ENST00000545868 PA2G4Q9UQ80 394 aaKnown RBP12.02□□□□□ -0.49
GABRB3-205ENST00000545868 SLURP2P0DP57 97 aa12.01□□□□□ -0.49
GABRB3-205ENST00000545868 CETPP11597 493 aa12.01□□□□□ -0.49
GABRB3-205ENST00000545868 HOXB3P14651 431 aaPredicted RBP12.01□□□□□ -0.49
GABRB3-205ENST00000545868 ADORA1P30542 326 aa12.01□□□□□ -0.49
GABRB3-205ENST00000545868 LACTBP83111 547 aaPredicted RBP12.01□□□□□ -0.49
GABRB3-205ENST00000545868 TCP10Q12799 353 aa12.01□□□□□ -0.49
GABRB3-205ENST00000545868 SNAPC2Q13487 334 aa12.01□□□□□ -0.49
GABRB3-205ENST00000545868 C17orf99Q6UX52 265 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms