RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 CCDC27Q2M243 656 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 DALRD3Q5D0E6 543 aaKnown RBP8.16□□□□□ -1.1
LDHC-209ENST00000545848 RIPOR1Q6ZS17 1223 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 TRIM22Q8IYM9 498 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 SVOPQ8N4V2 548 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 CNKSR1Q969H4 720 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 ZNF622Q969S3 477 aaKnown RBP eCLIP8.16□□□□□ -1.1
LDHC-209ENST00000545848 GMCL1Q96IK5 515 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 ESYT1Q9BSJ8 1104 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 ZNF541Q9H0D2 1346 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 BABAM1Q9NWV8 329 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 ABCC4O15439 1325 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 SPATA31C2B4DYI2 1134 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 VAMP4O75379 141 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 IL2RAP01589 272 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 NEFMP07197 916 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 ABL2P42684 1182 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 GAS6Q14393 721 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 DBN1Q16643 649 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 TSGA10IPQ3SY00 556 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 SLFNL1Q499Z3 407 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 CLEC4GQ6UXB4 293 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 PHTF2Q8N3S3 785 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 WHAMMQ8TF30 809 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 GPR101Q96P66 508 aaPredicted RBP8.15□□□□□ -1.1
LDHC-209ENST00000545848 GAS2L1Q99501 681 aaPredicted RBP8.15□□□□□ -1.1
LDHC-209ENST00000545848 PNNQ9H307 717 aaKnown RBP8.15□□□□□ -1.1
LDHC-209ENST00000545848 DOLKQ9UPQ8 538 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 TNNQ9UQP3 1299 aa8.15□□□□□ -1.1
LDHC-209ENST00000545848 PCNTO95613 3336 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 POLR2AP24928 1970 aaKnown RBP8.14□□□□□ -1.11
LDHC-209ENST00000545848 GNAI1P63096 354 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 TCIRG1Q13488 830 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 CWF19L2Q2TBE0 894 aaKnown RBP8.14□□□□□ -1.11
LDHC-209ENST00000545848 WDR44Q5JSH3 913 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 KIF6Q6ZMV9 814 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 TAS1R3Q7RTX0 852 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 TTLL6Q8N841 843 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 FAM89AQ96GI7 184 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 RNF181Q9P0P0 153 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 SCN4AP35499 1836 aa8.14□□□□□ -1.11
LDHC-209ENST00000545848 F6X3S4 739 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 H0YIN7 160 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 H7C1W4 665 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 GPR25O00155 361 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 GRIN3BO60391 1043 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 HOXB7P09629 217 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 HTRA3P83110 453 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 CENPCQ03188 943 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 SRSF11Q05519 484 aaKnown RBP8.13□□□□□ -1.11
LDHC-209ENST00000545848 USP4Q13107 963 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 MCM6Q14566 821 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 TWISTNBQ3B726 338 aaPredicted RBP8.13□□□□□ -1.11
LDHC-209ENST00000545848 STYK1Q6J9G0 422 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 FOXR1Q6PIV2 292 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 RNF135Q8IUD6 432 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 PLBD2Q8NHP8 589 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 CELF1Q92879 486 aaKnown RBP8.13□□□□□ -1.11
LDHC-209ENST00000545848 MYD88Q99836 296 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 TIMMDC1Q9NPL8 285 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 SEC31BQ9NQW1 1179 aa8.13□□□□□ -1.11
LDHC-209ENST00000545848 ZNF277Q9NRM2 450 aaPredicted RBP8.13□□□□□ -1.11
LDHC-209ENST00000545848 IL16Q14005 1332 aa8.12□□□□□ -1.11
LDHC-209ENST00000545848 SHTN1A0MZ66 631 aa8.12□□□□□ -1.11
LDHC-209ENST00000545848 CASP7P55210 303 aa8.12□□□□□ -1.11
LDHC-209ENST00000545848 ST5P78524 1137 aa8.12□□□□□ -1.11
LDHC-209ENST00000545848 MASTLQ96GX5 879 aa8.12□□□□□ -1.11
LDHC-209ENST00000545848 DBF4Q9UBU7 674 aaPredicted RBP8.12□□□□□ -1.11
LDHC-209ENST00000545848 MAP3K2Q9Y2U5 619 aa8.12□□□□□ -1.11
LDHC-209ENST00000545848 HRH3Q9Y5N1 445 aa8.12□□□□□ -1.11
LDHC-209ENST00000545848 ARAP2Q8WZ64 1704 aa8.12□□□□□ -1.11
LDHC-209ENST00000545848 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 NPR1P16066 1061 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 HOXA10P31260 410 aaPredicted RBP8.11□□□□□ -1.11
LDHC-209ENST00000545848 PDE6BP35913 854 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 KCNMA1Q12791 1236 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 WASHC4Q2M389 1173 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 OXLD1Q5BKU9 147 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 EPHA10Q5JZY3 1008 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 SLC10A5Q5PT55 438 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 GTPBP3Q969Y2 492 aaKnown RBP8.11□□□□□ -1.11
LDHC-209ENST00000545848 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 ZSCAN10Q96SZ4 725 aaPredicted RBP8.11□□□□□ -1.11
LDHC-209ENST00000545848 BCL2L13Q9BXK5 485 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 ZNF652Q9Y2D9 606 aa8.11□□□□□ -1.11
LDHC-209ENST00000545848 MYH13Q9UKX3 1938 aa8.1□□□□□ -1.11
LDHC-209ENST00000545848 F11P03951 625 aa8.1□□□□□ -1.11
LDHC-209ENST00000545848 LYPD4Q6UWN0 246 aa8.1□□□□□ -1.11
LDHC-209ENST00000545848 TPTE2Q6XPS3 522 aa8.1□□□□□ -1.11
LDHC-209ENST00000545848 TRMT2AQ8IZ69 625 aaKnown RBP8.1□□□□□ -1.11
LDHC-209ENST00000545848 METTL22Q9BUU2 404 aaPredicted RBP8.1□□□□□ -1.11
LDHC-209ENST00000545848 UTP14AQ9BVJ6 771 aaKnown RBP8.1□□□□□ -1.11
LDHC-209ENST00000545848 LTBP3Q9NS15 1303 aa8.09□□□□□ -1.11
LDHC-209ENST00000545848 TRPM7Q96QT4 1865 aa8.09□□□□□ -1.11
LDHC-209ENST00000545848 YDJCA8MPS7 323 aa8.09□□□□□ -1.11
LDHC-209ENST00000545848 NEURL1BA8MQ27 555 aa8.09□□□□□ -1.11
LDHC-209ENST00000545848 RNF225M0QZC1 329 aaPredicted RBP8.09□□□□□ -1.11
LDHC-209ENST00000545848 SNAP23O00161 211 aa8.09□□□□□ -1.11
LDHC-209ENST00000545848 DDNO94850 711 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms