RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ZCCHC17Q9NP64 241 aaKnown RBP24.42■■□□□ 1.5
CHD4-213ENST00000545584 NOP58Q9Y2X3 529 aaKnown RBP24.42■■□□□ 1.5
CHD4-213ENST00000545584 MAP4K4O95819 1239 aaPredicted RBP24.41■■□□□ 1.5
CHD4-213ENST00000545584 ARHGEF6Q15052 776 aa24.41■■□□□ 1.5
CHD4-213ENST00000545584 NOL9Q5SY16 702 aaKnown RBP24.41■■□□□ 1.5
CHD4-213ENST00000545584 OTOP1Q7RTM1 612 aa24.41■■□□□ 1.5
CHD4-213ENST00000545584 CD99L2Q8TCZ2 262 aa24.41■■□□□ 1.5
CHD4-213ENST00000545584 PANK1Q8TE04 598 aa24.41■■□□□ 1.5
CHD4-213ENST00000545584 NSUN4Q96CB9 384 aaKnown RBP24.41■■□□□ 1.5
CHD4-213ENST00000545584 DBNDD2Q9BQY9 259 aa24.41■■□□□ 1.5
CHD4-213ENST00000545584 NOL10Q9BSC4 688 aaKnown RBP24.4■■□□□ 1.5
CHD4-213ENST00000545584 EFCC1Q9HA90 598 aa24.4■■□□□ 1.5
CHD4-213ENST00000545584 RFX7Q2KHR2 1363 aa24.4■■□□□ 1.5
CHD4-213ENST00000545584 BTBD19C9JJ37 291 aa24.39■■□□□ 1.49
CHD4-213ENST00000545584 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.39■■□□□ 1.49
CHD4-213ENST00000545584 DOCK2Q92608 1830 aa24.38■■□□□ 1.49
CHD4-213ENST00000545584 RHBDL3P58872 404 aa24.38■■□□□ 1.49
CHD4-213ENST00000545584 CEP85Q6P2H3 762 aa24.38■■□□□ 1.49
CHD4-213ENST00000545584 ZNF384Q8TF68 577 aa24.38■■□□□ 1.49
CHD4-213ENST00000545584 DDX4Q9NQI0 724 aaKnown RBP24.38■■□□□ 1.49
CHD4-213ENST00000545584 PICK1Q9NRD5 415 aa24.38■■□□□ 1.49
CHD4-213ENST00000545584 SNRKQ9NRH2 765 aa24.38■■□□□ 1.49
CHD4-213ENST00000545584 NPM3O75607 178 aaKnown RBP24.37■■□□□ 1.49
CHD4-213ENST00000545584 SH3BP5LQ7L8J4 393 aa24.37■■□□□ 1.49
CHD4-213ENST00000545584 SCYL3Q8IZE3 742 aa24.37■■□□□ 1.49
CHD4-213ENST00000545584 KCNH4Q9UQ05 1017 aa24.37■■□□□ 1.49
CHD4-213ENST00000545584 DDTLA6NHG4 134 aaPredicted RBP24.36■■□□□ 1.49
CHD4-213ENST00000545584 TLR2O60603 784 aa24.36■■□□□ 1.49
CHD4-213ENST00000545584 NAA16Q6N069 864 aaPredicted RBP24.36■■□□□ 1.49
CHD4-213ENST00000545584 ERC1Q8IUD2 1116 aa24.36■■□□□ 1.49
CHD4-213ENST00000545584 ZNF512BQ96KM6 892 aaPredicted RBP24.36■■□□□ 1.49
CHD4-213ENST00000545584 PTPN22Q9Y2R2 807 aa24.36■■□□□ 1.49
CHD4-213ENST00000545584 ATRNL1Q5VV63 1379 aa24.36■■□□□ 1.49
CHD4-213ENST00000545584 PHF20L1A8MW92 1017 aa24.35■■□□□ 1.49
CHD4-213ENST00000545584 BAG3O95817 575 aa24.35■■□□□ 1.49
CHD4-213ENST00000545584 MAP3K10Q02779 954 aa24.35■■□□□ 1.49
CHD4-213ENST00000545584 ANKRD23Q86SG2 305 aa24.35■■□□□ 1.49
CHD4-213ENST00000545584 CXCL11O14625 94 aa24.34■■□□□ 1.49
CHD4-213ENST00000545584 IGSF3O75054 1194 aa24.34■■□□□ 1.49
CHD4-213ENST00000545584 KIF22Q14807 665 aa24.34■■□□□ 1.49
CHD4-213ENST00000545584 HSP90AB4PQ58FF6 505 aa24.34■■□□□ 1.49
CHD4-213ENST00000545584 TEX11Q8IYF3 940 aa24.34■■□□□ 1.49
CHD4-213ENST00000545584 CCDC8Q9H0W5 538 aaPredicted RBP24.34■■□□□ 1.49
CHD4-213ENST00000545584 DBNLQ9UJU6 430 aaKnown RBP24.34■■□□□ 1.49
CHD4-213ENST00000545584 CTNND1O60716 968 aaKnown RBP24.33■■□□□ 1.49
CHD4-213ENST00000545584 PLCG2P16885 1265 aa24.33■■□□□ 1.49
CHD4-213ENST00000545584 DDX19BQ9UMR2 479 aa24.33■■□□□ 1.49
CHD4-213ENST00000545584 ZHX2Q9Y6X8 837 aa24.33■■□□□ 1.49
CHD4-213ENST00000545584 PDHXO00330 501 aa24.32■■□□□ 1.48
CHD4-213ENST00000545584 TBC1D12O60347 775 aa24.32■■□□□ 1.48
CHD4-213ENST00000545584 CYP2E1P05181 493 aaPredicted RBP24.32■■□□□ 1.48
CHD4-213ENST00000545584 EAF2Q96CJ1 260 aaPredicted RBP24.32■■□□□ 1.48
CHD4-213ENST00000545584 OSBPL5Q9H0X9 879 aaPredicted RBP24.32■■□□□ 1.48
CHD4-213ENST00000545584 CHMP4BQ9H444 224 aaKnown RBP24.32■■□□□ 1.48
CHD4-213ENST00000545584 EXOC6BQ9Y2D4 811 aa24.32■■□□□ 1.48
CHD4-213ENST00000545584 PTPRAP18433 802 aa24.31■■□□□ 1.48
CHD4-213ENST00000545584 ZAP70P43403 619 aa24.31■■□□□ 1.48
CHD4-213ENST00000545584 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.31■■□□□ 1.48
CHD4-213ENST00000545584 AATFQ9NY61 560 aaKnown RBP eCLIP24.31■■□□□ 1.48
CHD4-213ENST00000545584 RCAN3Q9UKA8 241 aa24.31■■□□□ 1.48
CHD4-213ENST00000545584 HMMRO75330 724 aa24.3■■□□□ 1.48
CHD4-213ENST00000545584 FASTKD5Q7L8L6 764 aaKnown RBP24.3■■□□□ 1.48
CHD4-213ENST00000545584 RPAP2Q8IXW5 612 aaPredicted RBP24.3■■□□□ 1.48
CHD4-213ENST00000545584 SH3RF3Q8TEJ3 882 aaPredicted RBP24.3■■□□□ 1.48
CHD4-213ENST00000545584 TLR7Q9NYK1 1049 aaKnown RBP24.3■■□□□ 1.48
CHD4-213ENST00000545584 COG6Q9Y2V7 657 aa24.3■■□□□ 1.48
CHD4-213ENST00000545584 COL2A1P02458 1487 aaPredicted RBP24.3■■□□□ 1.48
CHD4-213ENST00000545584 PPP4CP60510 307 aa24.29■■□□□ 1.48
CHD4-213ENST00000545584 AACSQ86V21 672 aa24.29■■□□□ 1.48
CHD4-213ENST00000545584 PARK7Q99497 189 aaKnown RBP24.29■■□□□ 1.48
CHD4-213ENST00000545584 MAST2Q6P0Q8 1798 aa24.29■■□□□ 1.48
CHD4-213ENST00000545584 SLURP2P0DP57 97 aa24.28■■□□□ 1.48
CHD4-213ENST00000545584 LACTBP83111 547 aaPredicted RBP24.28■■□□□ 1.48
CHD4-213ENST00000545584 PIH1D3Q9NQM4 214 aaKnown RBP24.28■■□□□ 1.48
CHD4-213ENST00000545584 AFG3L2Q9Y4W6 797 aa24.28■■□□□ 1.48
CHD4-213ENST00000545584 GNRH1P01148 92 aa24.27■■□□□ 1.48
CHD4-213ENST00000545584 CAP1Q01518 475 aa24.27■■□□□ 1.48
CHD4-213ENST00000545584 MOGSQ13724 837 aa24.27■■□□□ 1.48
CHD4-213ENST00000545584 C17orf99Q6UX52 265 aa24.27■■□□□ 1.48
CHD4-213ENST00000545584 DHX36Q9H2U1 1008 aaKnown RBP24.27■■□□□ 1.48
CHD4-213ENST00000545584 PI4KBQ9UBF8 816 aa24.27■■□□□ 1.48
CHD4-213ENST00000545584 CPA4Q9UI42 421 aa24.27■■□□□ 1.48
CHD4-213ENST00000545584 DOCK1Q14185 1865 aa24.26■■□□□ 1.47
CHD4-213ENST00000545584 A0A0G2JLL6 359 aaPredicted RBP24.26■■□□□ 1.47
CHD4-213ENST00000545584 FAM196BA6NMK8 535 aa24.26■■□□□ 1.47
CHD4-213ENST00000545584 IDH1O75874 414 aaKnown RBP24.26■■□□□ 1.47
CHD4-213ENST00000545584 GADL1Q6ZQY3 521 aa24.26■■□□□ 1.47
CHD4-213ENST00000545584 PRRT2Q7Z6L0 340 aaPredicted RBP24.26■■□□□ 1.47
CHD4-213ENST00000545584 RHPN1Q8TCX5 695 aa24.26■■□□□ 1.47
CHD4-213ENST00000545584 ARMC5Q96C12 935 aa24.26■■□□□ 1.47
CHD4-213ENST00000545584 HERC5Q9UII4 1024 aaKnown RBP24.26■■□□□ 1.47
CHD4-213ENST00000545584 CYP7A1P22680 504 aa24.25■■□□□ 1.47
CHD4-213ENST00000545584 NBPF11Q86T75 865 aa24.25■■□□□ 1.47
CHD4-213ENST00000545584 CLASRPQ8N2M8 674 aaKnown RBP24.25■■□□□ 1.47
CHD4-213ENST00000545584 TGFBRAP1Q8WUH2 860 aa24.25■■□□□ 1.47
CHD4-213ENST00000545584 IL1RAPL2Q9NP60 686 aa24.25■■□□□ 1.47
CHD4-213ENST00000545584 ZBTB40Q9NUA8 1239 aa24.25■■□□□ 1.47
CHD4-213ENST00000545584 TRIM75PA6NK02 468 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 PRMT2P55345 433 aa24.24■■□□□ 1.47
CHD4-213ENST00000545584 MAP3K12Q12852 859 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms