RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
LTBR-214ENST00000545445 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
LTBR-214ENST00000545445 OTUD5Q96G74 571 aa14.36□□□□□ -0.11
LTBR-214ENST00000545445 ELP3Q9H9T3 547 aa14.36□□□□□ -0.11
LTBR-214ENST00000545445 VEZTQ9HBM0 779 aa14.36□□□□□ -0.11
LTBR-214ENST00000545445 LAMB1P07942 1786 aa14.36□□□□□ -0.11
LTBR-214ENST00000545445 TESPA1A2RU30 521 aaPredicted RBP14.35□□□□□ -0.11
LTBR-214ENST00000545445 ZAP70P43403 619 aa14.35□□□□□ -0.11
LTBR-214ENST00000545445 IREB2P48200 963 aaKnown RBP14.35□□□□□ -0.11
LTBR-214ENST00000545445 SUPT20HL1Q3ZLR7 823 aa14.35□□□□□ -0.11
LTBR-214ENST00000545445 OPTNQ96CV9 577 aa14.35□□□□□ -0.11
LTBR-214ENST00000545445 SNRKQ9NRH2 765 aa14.35□□□□□ -0.11
LTBR-214ENST00000545445 PAG1Q9NWQ8 432 aa14.35□□□□□ -0.11
LTBR-214ENST00000545445 CEP290O15078 2479 aa14.35□□□□□ -0.11
LTBR-214ENST00000545445 RANBP2P49792 3224 aaKnown RBP14.34□□□□□ -0.11
LTBR-214ENST00000545445 SPDYE2BA6NHP3 402 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 UNCXA6NJT0 531 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 USP2O75604 605 aaPredicted RBP14.34□□□□□ -0.11
LTBR-214ENST00000545445 CYP2E1P05181 493 aaPredicted RBP14.34□□□□□ -0.11
LTBR-214ENST00000545445 SPDYE6P0CI01 402 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 LRRFIP1Q32MZ4 808 aaKnown RBP14.34□□□□□ -0.11
LTBR-214ENST00000545445 CFAP100Q494V2 611 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 TSHZ3Q63HK5 1081 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 ANKRD13AQ8IZ07 590 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 MTMR14Q8NCE2 650 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 SH3TC2Q8TF17 1288 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 BRI3BPQ8WY22 251 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 DNAJC2Q99543 621 aaKnown RBP14.34□□□□□ -0.11
LTBR-214ENST00000545445 MAST3O60307 1309 aa14.34□□□□□ -0.11
LTBR-214ENST00000545445 GOLIM4O00461 696 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 MYO1BO43795 1136 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 LDHBP07195 334 aaKnown RBP14.33□□□□□ -0.12
LTBR-214ENST00000545445 RASA3Q14644 834 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 TAF1CQ15572 869 aaPredicted RBP14.33□□□□□ -0.12
LTBR-214ENST00000545445 PI16Q6UXB8 463 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 ERICH6Q7L0X2 663 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 SLF2Q8IX21 1173 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 EVI5LQ96CN4 794 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 PRMT6Q96LA8 375 aaPredicted RBP14.33□□□□□ -0.12
LTBR-214ENST00000545445 MRIQ9BWK5 157 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 LRP2BPQ9P2M1 347 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 ABCF2Q9UG63 623 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 JAG2Q9Y219 1238 aa14.33□□□□□ -0.12
LTBR-214ENST00000545445 HDLBPQ00341 1268 aaKnown RBP14.32□□□□□ -0.12
LTBR-214ENST00000545445 MAP3K12Q12852 859 aa14.32□□□□□ -0.12
LTBR-214ENST00000545445 TTC22Q5TAA0 569 aa14.32□□□□□ -0.12
LTBR-214ENST00000545445 ZSCAN25Q6NSZ9 544 aa14.32□□□□□ -0.12
LTBR-214ENST00000545445 CDAN1Q8IWY9 1227 aa14.32□□□□□ -0.12
LTBR-214ENST00000545445 MS4A4AQ96JQ5 239 aa14.32□□□□□ -0.12
LTBR-214ENST00000545445 ARHGAP39Q9C0H5 1083 aa14.32□□□□□ -0.12
LTBR-214ENST00000545445 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.12
LTBR-214ENST00000545445 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
LTBR-214ENST00000545445 OTOFQ9HC10 1997 aa14.32□□□□□ -0.12
LTBR-214ENST00000545445 MYH13Q9UKX3 1938 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 CCL15-CCL14A0A0B4J2E2 113 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 DLL1O00548 723 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 RGS3P49796 1198 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 GSTO1P78417 241 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 CCL15Q16663 113 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 TBC1D9Q6ZT07 1266 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 DZIP1Q86YF9 867 aaKnown RBP14.31□□□□□ -0.12
LTBR-214ENST00000545445 FAM43AQ8N2R8 423 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 KBTBD3Q8NAB2 608 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 ZFYVE28Q9HCC9 887 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 RAI14Q9P0K7 980 aa14.31□□□□□ -0.12
LTBR-214ENST00000545445 TRIM6-TRIM34B2RNG4 842 aa14.3□□□□□ -0.12
LTBR-214ENST00000545445 IDH1O75874 414 aaKnown RBP14.3□□□□□ -0.12
LTBR-214ENST00000545445 ECM2O94769 699 aaPredicted RBP14.3□□□□□ -0.12
LTBR-214ENST00000545445 LDHCP07864 332 aa14.3□□□□□ -0.12
LTBR-214ENST00000545445 ZFYP08048 801 aaPredicted RBP14.3□□□□□ -0.12
LTBR-214ENST00000545445 PRDX5P30044 214 aa14.3□□□□□ -0.12
LTBR-214ENST00000545445 RBM5P52756 815 aaKnown RBP eCLIP14.3□□□□□ -0.12
LTBR-214ENST00000545445 BMP2KLQ5H9B9 411 aa14.3□□□□□ -0.12
LTBR-214ENST00000545445 SHISA4Q96DD7 197 aa14.3□□□□□ -0.12
LTBR-214ENST00000545445 ANTXR1Q9H6X2 564 aa14.3□□□□□ -0.12
LTBR-214ENST00000545445 PIH1D3Q9NQM4 214 aaKnown RBP14.3□□□□□ -0.12
LTBR-214ENST00000545445 SERPINA10Q9UK55 444 aa14.3□□□□□ -0.12
LTBR-214ENST00000545445 TTF2Q9UNY4 1162 aaKnown RBP14.3□□□□□ -0.12
LTBR-214ENST00000545445 NDUFB9Q9Y6M9 179 aa14.3□□□□□ -0.12
LTBR-214ENST00000545445 ZSWIM8A7E2V4 1837 aa14.29□□□□□ -0.12
LTBR-214ENST00000545445 VGLL4Q14135 290 aa14.29□□□□□ -0.12
LTBR-214ENST00000545445 HHIPL2Q6UWX4 724 aa14.29□□□□□ -0.12
LTBR-214ENST00000545445 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.29□□□□□ -0.12
LTBR-214ENST00000545445 SLC17A8Q8NDX2 589 aa14.29□□□□□ -0.12
LTBR-214ENST00000545445 DPF3Q92784 378 aa14.29□□□□□ -0.12
LTBR-214ENST00000545445 EDC3Q96F86 508 aaKnown RBP14.29□□□□□ -0.12
LTBR-214ENST00000545445 FAM163AQ96GL9 167 aaPredicted RBP14.29□□□□□ -0.12
LTBR-214ENST00000545445 RFX7Q2KHR2 1363 aa14.29□□□□□ -0.12
LTBR-214ENST00000545445 HIP1O00291 1037 aa14.28□□□□□ -0.12
LTBR-214ENST00000545445 GSPT1P15170 499 aaKnown RBP14.28□□□□□ -0.12
LTBR-214ENST00000545445 MECOMQ03112 1051 aa14.28□□□□□ -0.12
LTBR-214ENST00000545445 ECM29Q5VYK3 1845 aa14.28□□□□□ -0.12
LTBR-214ENST00000545445 NAA16Q6N069 864 aaPredicted RBP14.28□□□□□ -0.12
LTBR-214ENST00000545445 CERS3Q8IU89 383 aa14.28□□□□□ -0.12
LTBR-214ENST00000545445 TEKT1Q969V4 418 aa14.28□□□□□ -0.12
LTBR-214ENST00000545445 RILPL2Q969X0 211 aa14.28□□□□□ -0.12
LTBR-214ENST00000545445 NSUN4Q96CB9 384 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms