RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TCP10Q12799 353 aa18.5■□□□□ 0.55
RTN3-214ENST00000545432 SCYL3Q8IZE3 742 aa18.5■□□□□ 0.55
RTN3-214ENST00000545432 LPIN2Q92539 896 aa18.5■□□□□ 0.55
RTN3-214ENST00000545432 ZHX2Q9Y6X8 837 aa18.5■□□□□ 0.55
RTN3-214ENST00000545432 A0A0C4DFX4 3053 aa18.5■□□□□ 0.55
RTN3-214ENST00000545432 ENTPD3O75355 529 aa18.49■□□□□ 0.55
RTN3-214ENST00000545432 TFRCP02786 760 aaKnown RBP18.49■□□□□ 0.55
RTN3-214ENST00000545432 ELNP15502 786 aa18.49■□□□□ 0.55
RTN3-214ENST00000545432 DIXDC1Q155Q3 683 aa18.49■□□□□ 0.55
RTN3-214ENST00000545432 ANKLE1Q8NAG6 615 aa18.49■□□□□ 0.55
RTN3-214ENST00000545432 DEFB118Q96PH6 123 aa18.49■□□□□ 0.55
RTN3-214ENST00000545432 PRDX5P30044 214 aa18.48■□□□□ 0.55
RTN3-214ENST00000545432 SH3BP5LQ7L8J4 393 aa18.48■□□□□ 0.55
RTN3-214ENST00000545432 KLHDC4Q8TBB5 520 aa18.48■□□□□ 0.55
RTN3-214ENST00000545432 PAWRQ96IZ0 340 aaKnown RBP18.48■□□□□ 0.55
RTN3-214ENST00000545432 USP44Q9H0E7 712 aa18.48■□□□□ 0.55
RTN3-214ENST00000545432 USP40Q9NVE5 1235 aa18.48■□□□□ 0.55
RTN3-214ENST00000545432 MGAMO43451 1857 aa18.48■□□□□ 0.55
RTN3-214ENST00000545432 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
RTN3-214ENST00000545432 EYA2O00167 538 aa18.47■□□□□ 0.55
RTN3-214ENST00000545432 LRIT3Q3SXY7 679 aa18.47■□□□□ 0.55
RTN3-214ENST00000545432 FAM163AQ96GL9 167 aaPredicted RBP18.47■□□□□ 0.55
RTN3-214ENST00000545432 TNPO2O14787 897 aaKnown RBP18.46■□□□□ 0.55
RTN3-214ENST00000545432 CTNND1O60716 968 aaKnown RBP18.46■□□□□ 0.55
RTN3-214ENST00000545432 SLC5A1P13866 664 aa18.46■□□□□ 0.55
RTN3-214ENST00000545432 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
RTN3-214ENST00000545432 NECAB2Q7Z6G3 386 aa18.46■□□□□ 0.55
RTN3-214ENST00000545432 FBXO3Q9UK99 471 aa18.46■□□□□ 0.55
RTN3-214ENST00000545432 GAKO14976 1311 aa18.46■□□□□ 0.55
RTN3-214ENST00000545432 SEMA3EO15041 775 aa18.45■□□□□ 0.54
RTN3-214ENST00000545432 FAM110CQ1W6H9 321 aa18.45■□□□□ 0.54
RTN3-214ENST00000545432 PICK1Q9NRD5 415 aa18.45■□□□□ 0.54
RTN3-214ENST00000545432 GJD2Q9UKL4 321 aa18.45■□□□□ 0.54
RTN3-214ENST00000545432 AGTPBP1Q9UPW5 1226 aa18.45■□□□□ 0.54
RTN3-214ENST00000545432 DOCK3Q8IZD9 2030 aa18.44■□□□□ 0.54
RTN3-214ENST00000545432 TBC1D12O60347 775 aa18.44■□□□□ 0.54
RTN3-214ENST00000545432 LDHBP07195 334 aaKnown RBP18.44■□□□□ 0.54
RTN3-214ENST00000545432 RGS3P49796 1198 aa18.44■□□□□ 0.54
RTN3-214ENST00000545432 COA7Q96BR5 231 aa18.44■□□□□ 0.54
RTN3-214ENST00000545432 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.44■□□□□ 0.54
RTN3-214ENST00000545432 GADL1Q6ZQY3 521 aa18.43■□□□□ 0.54
RTN3-214ENST00000545432 MRPL50Q8N5N7 158 aaKnown RBP18.43■□□□□ 0.54
RTN3-214ENST00000545432 DIS3LQ8TF46 1054 aaKnown RBP18.43■□□□□ 0.54
RTN3-214ENST00000545432 STXBP5LQ9Y2K9 1186 aa18.43■□□□□ 0.54
RTN3-214ENST00000545432 DDTLA6NHG4 134 aaPredicted RBP18.42■□□□□ 0.54
RTN3-214ENST00000545432 NPM3O75607 178 aaKnown RBP18.42■□□□□ 0.54
RTN3-214ENST00000545432 PROCA1Q8NCQ7 364 aaPredicted RBP18.42■□□□□ 0.54
RTN3-214ENST00000545432 DENND2AQ9ULE3 1009 aa18.42■□□□□ 0.54
RTN3-214ENST00000545432 SALL2Q9Y467 1007 aaPredicted RBP18.42■□□□□ 0.54
RTN3-214ENST00000545432 ALPK3Q96L96 1907 aa18.42■□□□□ 0.54
RTN3-214ENST00000545432 CIAO1O76071 339 aa18.41■□□□□ 0.54
RTN3-214ENST00000545432 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
RTN3-214ENST00000545432 SMCR8Q8TEV9 937 aaPredicted RBP18.41■□□□□ 0.54
RTN3-214ENST00000545432 NBPF3Q9H094 633 aa18.41■□□□□ 0.54
RTN3-214ENST00000545432 DDX4Q9NQI0 724 aaKnown RBP18.41■□□□□ 0.54
RTN3-214ENST00000545432 GNL3LQ9NVN8 582 aaKnown RBP18.41■□□□□ 0.54
RTN3-214ENST00000545432 MTMR10Q9NXD2 777 aa18.41■□□□□ 0.54
RTN3-214ENST00000545432 LRRFIP2Q9Y608 721 aaKnown RBP18.41■□□□□ 0.54
RTN3-214ENST00000545432 PTPRCP08575 1304 aa18.41■□□□□ 0.54
RTN3-214ENST00000545432 RPTORQ8N122 1335 aa18.41■□□□□ 0.54
RTN3-214ENST00000545432 HMGCRP04035 888 aa18.4■□□□□ 0.54
RTN3-214ENST00000545432 GCLCP48506 637 aaPredicted RBP18.4■□□□□ 0.54
RTN3-214ENST00000545432 DEFB123Q8N688 67 aa18.4■□□□□ 0.54
RTN3-214ENST00000545432 ANKRD13CQ8N6S4 541 aa18.4■□□□□ 0.54
RTN3-214ENST00000545432 OGDHLQ9ULD0 1010 aa18.4■□□□□ 0.54
RTN3-214ENST00000545432 PTPRFP10586 1907 aa18.4■□□□□ 0.54
RTN3-214ENST00000545432 PDS5AQ29RF7 1337 aaKnown RBP18.4■□□□□ 0.54
RTN3-214ENST00000545432 PHIPQ8WWQ0 1821 aa18.39■□□□□ 0.54
RTN3-214ENST00000545432 SLURP2P0DP57 97 aa18.39■□□□□ 0.53
RTN3-214ENST00000545432 ATP2B3Q16720 1220 aa18.39■□□□□ 0.53
RTN3-214ENST00000545432 SH3D19Q5HYK7 790 aa18.39■□□□□ 0.53
RTN3-214ENST00000545432 TREML2Q5T2D2 321 aa18.39■□□□□ 0.53
RTN3-214ENST00000545432 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
RTN3-214ENST00000545432 PNMA3Q9UL41 463 aa18.39■□□□□ 0.53
RTN3-214ENST00000545432 ZNF521Q96K83 1311 aa18.39■□□□□ 0.53
RTN3-214ENST00000545432 AK9Q5TCS8 1911 aa18.39■□□□□ 0.53
RTN3-214ENST00000545432 TRIM75PA6NK02 468 aa18.38■□□□□ 0.53
RTN3-214ENST00000545432 PHKA1P46020 1223 aa18.38■□□□□ 0.53
RTN3-214ENST00000545432 RHBDL3P58872 404 aa18.38■□□□□ 0.53
RTN3-214ENST00000545432 TDHQ8IZJ6 230 aa18.38■□□□□ 0.53
RTN3-214ENST00000545432 ZGPATQ8N5A5 531 aaKnown RBP18.38■□□□□ 0.53
RTN3-214ENST00000545432 TBC1D2Q9BYX2 928 aa18.38■□□□□ 0.53
RTN3-214ENST00000545432 HMX1Q9NP08 348 aaPredicted RBP18.38■□□□□ 0.53
RTN3-214ENST00000545432 CEP126Q9P2H0 1117 aa18.38■□□□□ 0.53
RTN3-214ENST00000545432 MORF4L1Q9UBU8 362 aa18.38■□□□□ 0.53
RTN3-214ENST00000545432 GPR75-ASB3A0A0A6YYF3 556 aa18.37■□□□□ 0.53
RTN3-214ENST00000545432 C7orf61Q8IZ16 206 aa18.37■□□□□ 0.53
RTN3-214ENST00000545432 OSBPL5Q9H0X9 879 aaPredicted RBP18.37■□□□□ 0.53
RTN3-214ENST00000545432 ZMYND8Q9ULU4 1186 aaPredicted RBP18.37■□□□□ 0.53
RTN3-214ENST00000545432 MAP4K4O95819 1239 aaPredicted RBP18.36■□□□□ 0.53
RTN3-214ENST00000545432 COL6A1P12109 1028 aa18.36■□□□□ 0.53
RTN3-214ENST00000545432 MAGEA10P43363 369 aaPredicted RBP18.36■□□□□ 0.53
RTN3-214ENST00000545432 TRIM32Q13049 653 aa18.36■□□□□ 0.53
RTN3-214ENST00000545432 CCDC102BQ68D86 513 aa18.36■□□□□ 0.53
RTN3-214ENST00000545432 SLF2Q8IX21 1173 aa18.36■□□□□ 0.53
RTN3-214ENST00000545432 C11orf49Q9H6J7 331 aa18.36■□□□□ 0.53
RTN3-214ENST00000545432 MRS2Q9HD23 443 aa18.36■□□□□ 0.53
RTN3-214ENST00000545432 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.36■□□□□ 0.53
RTN3-214ENST00000545432 DOCK2Q92608 1830 aa18.35■□□□□ 0.53
RTN3-214ENST00000545432 XRCC5P13010 732 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms