RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 DDR1Q08345 913 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 IMMTQ16891 758 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 SLC9C2Q5TAH2 1124 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 C15orf52Q6ZUT6 534 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 NOL8Q76FK4 1167 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 FBXO33Q7Z6M2 555 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 VPS37DQ86XT2 251 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 NLGN1Q8N2Q7 840 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 ZGPATQ8N5A5 531 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 FBXO41Q8TF61 875 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 RPGRQ92834 1020 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 TNPO1Q92973 898 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 RBM17Q96I25 401 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 NEK1Q96PY6 1258 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 PUS7LQ9H0K6 701 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 TFCP2L1Q9NZI6 479 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 WWC3Q9ULE0 1092 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 LEMD3Q9Y2U8 911 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 XDHP47989 1333 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 PNPLA7Q6ZV29 1317 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 WDR19Q8NEZ3 1342 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 ZNF532Q9HCE3 1301 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 IRS2Q9Y4H2 1338 aa6.48□□□□□ -1.37
NPIPB3-214ENST00000545358 LAMB1P07942 1786 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 CHD4Q14839 1912 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 GOLGA6L22H0YM25 854 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 SNAP23O00161 211 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 GPR37O15354 613 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 FOXP2O15409 715 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 GNAT2P19087 354 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 HOXA10P31260 410 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 ALX1Q15699 326 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 SLFNL1Q499Z3 407 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 FBXL16Q8N461 479 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 MAGEB6Q8N7X4 407 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 AIDAQ96BJ3 306 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 FAM84BQ96KN1 310 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 CRAMP1Q96RY5 1269 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 PRR14Q9BWN1 585 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 WBP1LQ9NX94 342 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 CCDC88AQ3V6T2 1871 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 SALL1Q9NSC2 1324 aa6.47□□□□□ -1.37
NPIPB3-214ENST00000545358 E7EWF7 191 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 C3orf80F5H4A9 247 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 BBOX1O75936 387 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 LARGE1O95461 756 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 BRD1O95696 1058 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 CPA1P15085 419 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 ATP2B4P23634 1241 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 HIBADHP31937 336 aaKnown RBP6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 GYG1P46976 350 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 TOB2Q14106 344 aaPredicted RBP6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 ME3Q16798 604 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 POTEAQ6S8J7 498 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 STOX1Q6ZVD7 989 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 DHX32Q7L7V1 743 aaKnown RBP6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 ZNF804AQ7Z570 1209 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 CCDC24Q8N4L8 307 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 CHMP4CQ96CF2 233 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 AGXT2Q9BYV1 514 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 PODXL2Q9NZ53 605 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 LRP2BPQ9P2M1 347 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 RGS17Q9UGC6 210 aaPredicted RBP6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 SMC3Q9UQE7 1217 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 TAF6LQ9Y6J9 622 aa6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 WDR33Q9C0J8 1336 aaKnown RBP6.46□□□□□ -1.38
NPIPB3-214ENST00000545358 ZNF213O14771 459 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 MBD4O95243 580 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 ITGBL1O95965 494 aaPredicted RBP6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 FGAP02671 866 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 NPR1P16066 1061 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 ST3GAL1Q11201 340 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 SWT1Q5T5J6 900 aaKnown RBP6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 SPTY2D1Q68D10 685 aaPredicted RBP6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 RALYLQ86SE5 291 aaKnown RBP6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 COL23A1Q86Y22 540 aaPredicted RBP6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 CCDC83Q8IWF9 413 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 NCOA7Q8NI08 942 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 GTF3C6Q969F1 213 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 STRBPQ96SI9 672 aaKnown RBP6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 BRIP1Q9BX63 1249 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 NACAP1Q9BZK3 213 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 TMEM134Q9H6X4 195 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 ANKIB1Q9P2G1 1089 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 GGA1Q9UJY5 639 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 TPCN1Q9ULQ1 816 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 PARP3Q9Y6F1 533 aa6.45□□□□□ -1.38
NPIPB3-214ENST00000545358 DLEC1Q9Y238 1755 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 RCCD1A6NED2 376 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 PATL2C9JE40 543 aaKnown RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 PPEF1O14829 653 aaPredicted RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 RNF40O75150 1001 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 UFL1O94874 794 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 BAG4O95429 457 aaKnown RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 PDCP20941 246 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 CYP7A1P22680 504 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 KLRK1P26718 216 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 MCM5P33992 734 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 PDE6BP35913 854 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 FGD1P98174 961 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms