RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CYP7A1P22680 504 aa19.13■□□□□ 0.65
CCDC78-216ENST00000544996 PPP4CP60510 307 aa19.13■□□□□ 0.65
CCDC78-216ENST00000544996 AAMPQ13685 434 aa19.13■□□□□ 0.65
CCDC78-216ENST00000544996 TEX11Q8IYF3 940 aa19.13■□□□□ 0.65
CCDC78-216ENST00000544996 TNS4Q8IZW8 715 aa19.13■□□□□ 0.65
CCDC78-216ENST00000544996 OPTNQ96CV9 577 aa19.13■□□□□ 0.65
CCDC78-216ENST00000544996 DNAJC2Q99543 621 aaKnown RBP19.13■□□□□ 0.65
CCDC78-216ENST00000544996 ANTXR1Q9H6X2 564 aa19.13■□□□□ 0.65
CCDC78-216ENST00000544996 RFX7Q2KHR2 1363 aa19.13■□□□□ 0.65
CCDC78-216ENST00000544996 SMARCA5O60264 1052 aaPredicted RBP19.12■□□□□ 0.65
CCDC78-216ENST00000544996 ATP5JP18859 108 aa19.12■□□□□ 0.65
CCDC78-216ENST00000544996 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
CCDC78-216ENST00000544996 MAGEB6Q8N7X4 407 aa19.12■□□□□ 0.65
CCDC78-216ENST00000544996 SH3RF3Q8TEJ3 882 aaPredicted RBP19.12■□□□□ 0.65
CCDC78-216ENST00000544996 DDX4Q9NQI0 724 aaKnown RBP19.12■□□□□ 0.65
CCDC78-216ENST00000544996 GOLIM4O00461 696 aa19.11■□□□□ 0.65
CCDC78-216ENST00000544996 ERO1BQ86YB8 467 aa19.11■□□□□ 0.65
CCDC78-216ENST00000544996 ZKSCAN4Q969J2 545 aaPredicted RBP19.11■□□□□ 0.65
CCDC78-216ENST00000544996 GPATCH3Q96I76 525 aa19.11■□□□□ 0.65
CCDC78-216ENST00000544996 AKAP11Q9UKA4 1901 aa19.1■□□□□ 0.65
CCDC78-216ENST00000544996 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
CCDC78-216ENST00000544996 ALDH1A1P00352 501 aa19.1■□□□□ 0.65
CCDC78-216ENST00000544996 SH3BP5LQ7L8J4 393 aa19.1■□□□□ 0.65
CCDC78-216ENST00000544996 ADGRA1Q86SQ6 560 aa19.1■□□□□ 0.65
CCDC78-216ENST00000544996 OTUD5Q96G74 571 aa19.1■□□□□ 0.65
CCDC78-216ENST00000544996 OSBPL5Q9H0X9 879 aaPredicted RBP19.1■□□□□ 0.65
CCDC78-216ENST00000544996 BOLA2Q9H3K6 86 aa19.1■□□□□ 0.65
CCDC78-216ENST00000544996 ZNF112Q9UJU3 913 aa19.1■□□□□ 0.65
CCDC78-216ENST00000544996 SNCAIPQ9Y6H5 919 aa19.1■□□□□ 0.65
CCDC78-216ENST00000544996 SPDYE5A6NIY4 337 aa19.09■□□□□ 0.65
CCDC78-216ENST00000544996 INPP5BP32019 993 aa19.09■□□□□ 0.65
CCDC78-216ENST00000544996 GJA5P36382 358 aa19.09■□□□□ 0.65
CCDC78-216ENST00000544996 GTF2A2P52657 109 aa19.09■□□□□ 0.65
CCDC78-216ENST00000544996 SLC9C2Q5TAH2 1124 aa19.09■□□□□ 0.65
CCDC78-216ENST00000544996 OTUD7BQ6GQQ9 843 aa19.09■□□□□ 0.65
CCDC78-216ENST00000544996 IFNL1Q8IU54 200 aa19.09■□□□□ 0.65
CCDC78-216ENST00000544996 ECHDC1Q9NTX5 307 aa19.09■□□□□ 0.65
CCDC78-216ENST00000544996 PAG1Q9NWQ8 432 aa19.09■□□□□ 0.65
CCDC78-216ENST00000544996 ZBTB47Q9UFB7 747 aaPredicted RBP19.09■□□□□ 0.65
CCDC78-216ENST00000544996 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.65
CCDC78-216ENST00000544996 MAP3K10Q02779 954 aa19.08■□□□□ 0.64
CCDC78-216ENST00000544996 MIGA1Q8NAN2 632 aa19.08■□□□□ 0.64
CCDC78-216ENST00000544996 TGFBRAP1Q8WUH2 860 aa19.08■□□□□ 0.64
CCDC78-216ENST00000544996 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
CCDC78-216ENST00000544996 HAUS7Q99871 368 aa19.08■□□□□ 0.64
CCDC78-216ENST00000544996 DHX36Q9H2U1 1008 aaKnown RBP19.08■□□□□ 0.64
CCDC78-216ENST00000544996 MAST2Q6P0Q8 1798 aa19.07■□□□□ 0.64
CCDC78-216ENST00000544996 PPATQ06203 517 aa19.07■□□□□ 0.64
CCDC78-216ENST00000544996 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.07■□□□□ 0.64
CCDC78-216ENST00000544996 COL2A1P02458 1487 aaPredicted RBP19.06■□□□□ 0.64
CCDC78-216ENST00000544996 TESPA1A2RU30 521 aaPredicted RBP19.06■□□□□ 0.64
CCDC78-216ENST00000544996 TBC1D12O60347 775 aa19.06■□□□□ 0.64
CCDC78-216ENST00000544996 TBC1D8O95759 1140 aa19.06■□□□□ 0.64
CCDC78-216ENST00000544996 PDE6AP16499 860 aa19.06■□□□□ 0.64
CCDC78-216ENST00000544996 DYNLL1P63167 89 aaKnown RBP19.06■□□□□ 0.64
CCDC78-216ENST00000544996 PPIL2Q13356 520 aa19.06■□□□□ 0.64
CCDC78-216ENST00000544996 NOL9Q5SY16 702 aaKnown RBP19.06■□□□□ 0.64
CCDC78-216ENST00000544996 MAPKAPK5Q8IW41 473 aa19.06■□□□□ 0.64
CCDC78-216ENST00000544996 MS4A4AQ96JQ5 239 aa19.06■□□□□ 0.64
CCDC78-216ENST00000544996 PICK1Q9NRD5 415 aa19.06■□□□□ 0.64
CCDC78-216ENST00000544996 PI4KBQ9UBF8 816 aa19.06■□□□□ 0.64
CCDC78-216ENST00000544996 SUPT16HQ9Y5B9 1047 aaKnown RBP19.06■□□□□ 0.64
CCDC78-216ENST00000544996 FLT1P17948 1338 aa19.05■□□□□ 0.64
CCDC78-216ENST00000544996 CCL15-CCL14A0A0B4J2E2 113 aa19.05■□□□□ 0.64
CCDC78-216ENST00000544996 PHF20L1A8MW92 1017 aa19.05■□□□□ 0.64
CCDC78-216ENST00000544996 CTNND1O60716 968 aaKnown RBP19.05■□□□□ 0.64
CCDC78-216ENST00000544996 CETPP11597 493 aa19.05■□□□□ 0.64
CCDC78-216ENST00000544996 USP5P45974 858 aa19.05■□□□□ 0.64
CCDC78-216ENST00000544996 SNAPC2Q13487 334 aa19.05■□□□□ 0.64
CCDC78-216ENST00000544996 HDAC1Q13547 482 aaPredicted RBP19.05■□□□□ 0.64
CCDC78-216ENST00000544996 CCL15Q16663 113 aa19.05■□□□□ 0.64
CCDC78-216ENST00000544996 GCC1Q96CN9 775 aa19.05■□□□□ 0.64
CCDC78-216ENST00000544996 EDC3Q96F86 508 aaKnown RBP19.05■□□□□ 0.64
CCDC78-216ENST00000544996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCDC78-216ENST00000544996 ZNF532Q9HCE3 1301 aa19.04■□□□□ 0.64
CCDC78-216ENST00000544996 MAGEB6P1A0A0J9YX57 407 aa19.04■□□□□ 0.64
CCDC78-216ENST00000544996 IGF2BP3O00425 579 aaKnown RBP eCLIP19.04■□□□□ 0.64
CCDC78-216ENST00000544996 IRF6O14896 467 aa19.04■□□□□ 0.64
CCDC78-216ENST00000544996 SCYL3Q8IZE3 742 aa19.04■□□□□ 0.64
CCDC78-216ENST00000544996 CFHR5Q9BXR6 569 aa19.04■□□□□ 0.64
CCDC78-216ENST00000544996 TRIM34Q9BYJ4 488 aa19.04■□□□□ 0.64
CCDC78-216ENST00000544996 HERC5Q9UII4 1024 aaKnown RBP19.04■□□□□ 0.64
CCDC78-216ENST00000544996 OTOFQ9HC10 1997 aa19.04■□□□□ 0.64
CCDC78-216ENST00000544996 HLA-DOAP06340 250 aa19.03■□□□□ 0.64
CCDC78-216ENST00000544996 IFFO2Q5TF58 517 aa19.03■□□□□ 0.64
CCDC78-216ENST00000544996 ZSCAN25Q6NSZ9 544 aa19.03■□□□□ 0.64
CCDC78-216ENST00000544996 RWDD1Q9H446 243 aaPredicted RBP19.03■□□□□ 0.64
CCDC78-216ENST00000544996 AK9Q5TCS8 1911 aa19.03■□□□□ 0.64
CCDC78-216ENST00000544996 NOM1Q5C9Z4 860 aaKnown RBP19.02■□□□□ 0.64
CCDC78-216ENST00000544996 ANKRD45Q5TZF3 282 aa19.02■□□□□ 0.64
CCDC78-216ENST00000544996 FOXP4Q8IVH2 680 aaPredicted RBP19.02■□□□□ 0.64
CCDC78-216ENST00000544996 CRACR2BQ8N4Y2 399 aaPredicted RBP19.02■□□□□ 0.64
CCDC78-216ENST00000544996 EXOC6Q8TAG9 804 aa19.02■□□□□ 0.64
CCDC78-216ENST00000544996 BRI3BPQ8WY22 251 aa19.02■□□□□ 0.64
CCDC78-216ENST00000544996 PTPN18Q99952 460 aa19.02■□□□□ 0.64
CCDC78-216ENST00000544996 RIOK1Q9BRS2 568 aaKnown RBP19.02■□□□□ 0.64
CCDC78-216ENST00000544996 PALD1Q9ULE6 856 aa19.02■□□□□ 0.64
CCDC78-216ENST00000544996 ZHX2Q9Y6X8 837 aa19.02■□□□□ 0.64
CCDC78-216ENST00000544996 TTC41PQ6P2S7 1318 aa19.01■□□□□ 0.63
CCDC78-216ENST00000544996 GPR25O00155 361 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms