RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 MNX1P50219 401 aaPredicted RBP18.28■□□□□ 0.52
COPS7A-220ENST00000544725 NECAB2Q7Z6G3 386 aa18.28■□□□□ 0.52
COPS7A-220ENST00000544725 KLHDC4Q8TBB5 520 aa18.28■□□□□ 0.52
COPS7A-220ENST00000544725 LPIN2Q92539 896 aa18.28■□□□□ 0.52
COPS7A-220ENST00000544725 COA7Q96BR5 231 aa18.28■□□□□ 0.52
COPS7A-220ENST00000544725 PAWRQ96IZ0 340 aaKnown RBP18.28■□□□□ 0.52
COPS7A-220ENST00000544725 CRISPLD2Q9H0B8 497 aa18.28■□□□□ 0.52
COPS7A-220ENST00000544725 PHF20L1A8MW92 1017 aa18.27■□□□□ 0.52
COPS7A-220ENST00000544725 LDHBP07195 334 aaKnown RBP18.27■□□□□ 0.52
COPS7A-220ENST00000544725 PTPRAP18433 802 aa18.27■□□□□ 0.52
COPS7A-220ENST00000544725 PRDX5P30044 214 aa18.27■□□□□ 0.52
COPS7A-220ENST00000544725 GPR153Q6NV75 609 aa18.27■□□□□ 0.52
COPS7A-220ENST00000544725 TAOK2Q9UL54 1235 aa18.27■□□□□ 0.52
COPS7A-220ENST00000544725 AFG3L2Q9Y4W6 797 aa18.27■□□□□ 0.52
COPS7A-220ENST00000544725 AK9Q5TCS8 1911 aa18.27■□□□□ 0.51
COPS7A-220ENST00000544725 MGAMO43451 1857 aa18.26■□□□□ 0.51
COPS7A-220ENST00000544725 BMP8BP34820 402 aa18.26■□□□□ 0.51
COPS7A-220ENST00000544725 ZFPM1Q8IX07 1006 aa18.26■□□□□ 0.51
COPS7A-220ENST00000544725 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
COPS7A-220ENST00000544725 GNL3LQ9NVN8 582 aaKnown RBP18.26■□□□□ 0.51
COPS7A-220ENST00000544725 LRRFIP2Q9Y608 721 aaKnown RBP18.26■□□□□ 0.51
COPS7A-220ENST00000544725 ATRNL1Q5VV63 1379 aa18.26■□□□□ 0.51
COPS7A-220ENST00000544725 EYA2O00167 538 aa18.25■□□□□ 0.51
COPS7A-220ENST00000544725 ENTPD3O75355 529 aa18.25■□□□□ 0.51
COPS7A-220ENST00000544725 RGS3P49796 1198 aa18.25■□□□□ 0.51
COPS7A-220ENST00000544725 ANKLE1Q8NAG6 615 aa18.25■□□□□ 0.51
COPS7A-220ENST00000544725 GDF15Q99988 308 aa18.25■□□□□ 0.51
COPS7A-220ENST00000544725 IDI2Q9BXS1 227 aa18.25■□□□□ 0.51
COPS7A-220ENST00000544725 ZSCAN29Q8IWY8 852 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-220ENST00000544725 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.24■□□□□ 0.51
COPS7A-220ENST00000544725 PNMA3Q9UL41 463 aa18.24■□□□□ 0.51
COPS7A-220ENST00000544725 AGTPBP1Q9UPW5 1226 aa18.24■□□□□ 0.51
COPS7A-220ENST00000544725 SALL1Q9NSC2 1324 aa18.23■□□□□ 0.51
COPS7A-220ENST00000544725 CTNND1O60716 968 aaKnown RBP18.23■□□□□ 0.51
COPS7A-220ENST00000544725 MAP3K10Q02779 954 aa18.23■□□□□ 0.51
COPS7A-220ENST00000544725 FAM110CQ1W6H9 321 aa18.23■□□□□ 0.51
COPS7A-220ENST00000544725 C7orf61Q8IZ16 206 aa18.23■□□□□ 0.51
COPS7A-220ENST00000544725 DEFB123Q8N688 67 aa18.23■□□□□ 0.51
COPS7A-220ENST00000544725 ANKRD13CQ8N6S4 541 aa18.23■□□□□ 0.51
COPS7A-220ENST00000544725 DIS3LQ8TF46 1054 aaKnown RBP18.23■□□□□ 0.51
COPS7A-220ENST00000544725 TRIM75PA6NK02 468 aa18.22■□□□□ 0.51
COPS7A-220ENST00000544725 SEMA3EO15041 775 aa18.22■□□□□ 0.51
COPS7A-220ENST00000544725 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
COPS7A-220ENST00000544725 DENND2AQ9ULE3 1009 aa18.22■□□□□ 0.51
COPS7A-220ENST00000544725 ZMYND8Q9ULU4 1186 aaPredicted RBP18.22■□□□□ 0.51
COPS7A-220ENST00000544725 HMGCRP04035 888 aa18.21■□□□□ 0.51
COPS7A-220ENST00000544725 RFX5P48382 616 aaPredicted RBP18.21■□□□□ 0.51
COPS7A-220ENST00000544725 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
COPS7A-220ENST00000544725 LRIT3Q3SXY7 679 aa18.21■□□□□ 0.51
COPS7A-220ENST00000544725 SH3BP5LQ7L8J4 393 aa18.21■□□□□ 0.51
COPS7A-220ENST00000544725 ZGPATQ8N5A5 531 aaKnown RBP18.21■□□□□ 0.51
COPS7A-220ENST00000544725 NBPF3Q9H094 633 aa18.21■□□□□ 0.51
COPS7A-220ENST00000544725 MYH13Q9UKX3 1938 aa18.21■□□□□ 0.51
COPS7A-220ENST00000544725 PTPRCP08575 1304 aa18.21■□□□□ 0.51
COPS7A-220ENST00000544725 USP44Q9H0E7 712 aa18.2■□□□□ 0.5
COPS7A-220ENST00000544725 HMX1Q9NP08 348 aaPredicted RBP18.2■□□□□ 0.5
COPS7A-220ENST00000544725 STXBP5LQ9Y2K9 1186 aa18.2■□□□□ 0.5
COPS7A-220ENST00000544725 GAKO14976 1311 aa18.2■□□□□ 0.5
COPS7A-220ENST00000544725 RPTORQ8N122 1335 aa18.2■□□□□ 0.5
COPS7A-220ENST00000544725 RFX7Q2KHR2 1363 aa18.19■□□□□ 0.5
COPS7A-220ENST00000544725 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
COPS7A-220ENST00000544725 DDTLA6NHG4 134 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-220ENST00000544725 GCLCP48506 637 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-220ENST00000544725 ATG9AQ7Z3C6 839 aa18.19■□□□□ 0.5
COPS7A-220ENST00000544725 SLF2Q8IX21 1173 aa18.19■□□□□ 0.5
COPS7A-220ENST00000544725 PROCA1Q8NCQ7 364 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-220ENST00000544725 CEP126Q9P2H0 1117 aa18.19■□□□□ 0.5
COPS7A-220ENST00000544725 FBXO3Q9UK99 471 aa18.19■□□□□ 0.5
COPS7A-220ENST00000544725 PABPC4Q13310 644 aaKnown RBP eCLIP18.18■□□□□ 0.5
COPS7A-220ENST00000544725 TREML2Q5T2D2 321 aa18.18■□□□□ 0.5
COPS7A-220ENST00000544725 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
COPS7A-220ENST00000544725 TDHQ8IZJ6 230 aa18.18■□□□□ 0.5
COPS7A-220ENST00000544725 MRPL50Q8N5N7 158 aaKnown RBP18.18■□□□□ 0.5
COPS7A-220ENST00000544725 C11orf49Q9H6J7 331 aa18.18■□□□□ 0.5
COPS7A-220ENST00000544725 ZBTB22O15209 634 aa18.17■□□□□ 0.5
COPS7A-220ENST00000544725 CIAO1O76071 339 aa18.17■□□□□ 0.5
COPS7A-220ENST00000544725 MAGEA10P43363 369 aaPredicted RBP18.17■□□□□ 0.5
COPS7A-220ENST00000544725 PHKA1P46020 1223 aa18.17■□□□□ 0.5
COPS7A-220ENST00000544725 PICALMQ13492 652 aa18.17■□□□□ 0.5
COPS7A-220ENST00000544725 Q7L0L9 218 aa18.17■□□□□ 0.5
COPS7A-220ENST00000544725 CCDC84Q86UT8 332 aaPredicted RBP18.17■□□□□ 0.5
COPS7A-220ENST00000544725 FAM163AQ96GL9 167 aaPredicted RBP18.17■□□□□ 0.5
COPS7A-220ENST00000544725 DDX4Q9NQI0 724 aaKnown RBP18.17■□□□□ 0.5
COPS7A-220ENST00000544725 UNC80Q8N2C7 3258 aa18.17■□□□□ 0.5
COPS7A-220ENST00000544725 ALPK3Q96L96 1907 aa18.17■□□□□ 0.5
COPS7A-220ENST00000544725 TBC1D12O60347 775 aa18.16■□□□□ 0.5
COPS7A-220ENST00000544725 SLURP2P0DP57 97 aa18.16■□□□□ 0.5
COPS7A-220ENST00000544725 SYN1P17600 705 aa18.16■□□□□ 0.5
COPS7A-220ENST00000544725 TBC1D2Q9BYX2 928 aa18.16■□□□□ 0.5
COPS7A-220ENST00000544725 SIL1Q9H173 461 aa18.16■□□□□ 0.5
COPS7A-220ENST00000544725 MTMR10Q9NXD2 777 aa18.16■□□□□ 0.5
COPS7A-220ENST00000544725 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.16■□□□□ 0.5
COPS7A-220ENST00000544725 DOCK1Q14185 1865 aa18.16■□□□□ 0.5
COPS7A-220ENST00000544725 PTPRFP10586 1907 aa18.15■□□□□ 0.5
COPS7A-220ENST00000544725 BTDP43251 543 aa18.15■□□□□ 0.5
COPS7A-220ENST00000544725 SPP2Q13103 211 aa18.15■□□□□ 0.5
COPS7A-220ENST00000544725 SPTY2D1Q68D10 685 aaPredicted RBP18.15■□□□□ 0.5
COPS7A-220ENST00000544725 ZNF280CQ8ND82 737 aa18.15■□□□□ 0.5
COPS7A-220ENST00000544725 UBE2OQ9C0C9 1292 aaKnown RBP18.15■□□□□ 0.5
COPS7A-220ENST00000544725 OSBPL5Q9H0X9 879 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms