RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TNFRSF10AO00220 468 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 TERTO14746 1132 aaKnown RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 KCNQ3O43525 872 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 NTSR2O95665 410 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 EGFRP00533 1210 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 SKIP12755 728 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 PDIA4P13667 645 aaKnown RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 RPIAP49247 311 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 SMCPP49901 116 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 TRIM32Q13049 653 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 GRAPQ13588 217 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 AGERQ15109 404 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 SLC4A8Q2Y0W8 1093 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 SLFNL1Q499Z3 407 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 SLC10A5Q5PT55 438 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 ANGEL2Q5VTE6 544 aaKnown RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 SUSD4Q5VX71 490 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 OTUD7BQ6GQQ9 843 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 NBPF10Q6P3W6 841 aaKnown RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 PLEKHM2Q8IWE5 1019 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 GRAPLQ8TC17 118 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 RTF1Q92541 710 aaKnown RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 UTP14AQ9BVJ6 771 aaKnown RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 GMPR2Q9P2T1 348 aaKnown RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 UBN2Q6ZU65 1347 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 USP17L3A6NCW0 530 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 USP17L4A6NCW7 530 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 USP17L5A8MUK1 530 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 ECE2O60344 883 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 ATG7O95352 703 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 VIL1P09327 827 aaKnown RBP5.41□□□□□ -1.54
SNHG1-220ENST00000544550 GPTP24298 496 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 WNT7BP56706 349 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 ZNF280AP59817 542 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-220ENST00000544550 SKOR1P84550 965 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 SCARF1Q14162 830 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 USP17L2Q6R6M4 530 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 USP17L1Q7RTZ2 530 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 ARMC9Q7Z3E5 817 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 RNF135Q8IUD6 432 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 TRMT44Q8IYL2 757 aaKnown RBP5.41□□□□□ -1.54
SNHG1-220ENST00000544550 ZNF34Q8IZ26 560 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 AGBL3Q8NEM8 1001 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 ZNF333Q96JL9 665 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 DBNDD1Q9H9R9 158 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 EFCC1Q9HA90 598 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 SENP2Q9HC62 589 aa5.41□□□□□ -1.54
SNHG1-220ENST00000544550 AKAP11Q9UKA4 1901 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 ZNF609O15014 1411 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 UBE2Q2LH0YL09 131 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 U2SURPO15042 1029 aaKnown RBP5.4□□□□□ -1.54
SNHG1-220ENST00000544550 LZTS3O60299 673 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-220ENST00000544550 ZBTB48P10074 688 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-220ENST00000544550 MAP7D1Q3KQU3 841 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 SLC9C1Q4G0N8 1177 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 HSP90AB3PQ58FF7 597 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 SLC51AQ86UW1 340 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 NGEFQ8N5V2 710 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 ZSCAN1Q8NBB4 408 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 PLPP7Q8NBV4 271 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 DPF3Q92784 378 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 HTATIP2Q9BUP3 242 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 ZC3H12CQ9C0D7 883 aaKnown RBP5.4□□□□□ -1.54
SNHG1-220ENST00000544550 VRTNQ9H8Y1 702 aa5.4□□□□□ -1.54
SNHG1-220ENST00000544550 NSFL1CQ9UNZ2 370 aaKnown RBP5.4□□□□□ -1.54
SNHG1-220ENST00000544550 ERBB4Q15303 1308 aa5.4□□□□□ -1.55
SNHG1-220ENST00000544550 RTL9Q8NET4 1388 aa5.4□□□□□ -1.55
SNHG1-220ENST00000544550 UNCXA6NJT0 531 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 ESPNB1AK53 854 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 HTATSF1O43719 755 aaKnown RBP5.39□□□□□ -1.55
SNHG1-220ENST00000544550 VARSP26640 1264 aaKnown RBP5.39□□□□□ -1.55
SNHG1-220ENST00000544550 MMP14P50281 582 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 SP3Q02447 781 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 PDE4CQ08493 712 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 TSGA10IPQ3SY00 556 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 MOB2Q70IA6 237 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 CD99L2Q8TCZ2 262 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 PNISRQ8TF01 805 aaKnown RBP5.39□□□□□ -1.55
SNHG1-220ENST00000544550 EMID1Q96A84 441 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-220ENST00000544550 SLC10A4Q96EP9 437 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 R3HDMLQ9H3Y0 253 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 MYOZ2Q9NPC6 264 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 CDV3Q9UKY7 258 aaKnown RBP5.39□□□□□ -1.55
SNHG1-220ENST00000544550 NR2E3Q9Y5X4 410 aa5.39□□□□□ -1.55
SNHG1-220ENST00000544550 RBBP6Q7Z6E9 1792 aaKnown RBP5.39□□□□□ -1.55
SNHG1-220ENST00000544550 SIPA1L3O60292 1781 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-220ENST00000544550 CD2BP2O95400 341 aaKnown RBP5.38□□□□□ -1.55
SNHG1-220ENST00000544550 NCOA4Q13772 614 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 ELOAQ14241 798 aaKnown RBP5.38□□□□□ -1.55
SNHG1-220ENST00000544550 TAF7Q15545 349 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-220ENST00000544550 RNF20Q5VTR2 975 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 LIAT1Q6ZQX7 453 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 TTLL7Q6ZT98 887 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 DEPDC4Q8N2C3 294 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 OGFOD1Q8N543 542 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 KIFC2Q96AC6 838 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 CCDC85AQ96PX6 553 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-220ENST00000544550 PRO3102Q9H379 93 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 USTQ9Y2C2 406 aa5.38□□□□□ -1.55
SNHG1-220ENST00000544550 RRP7AQ9Y3A4 280 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms