RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
HCFC2-202ENST00000544223 TGFBRAP1Q8WUH2 860 aa16.07■□□□□ 0.16
HCFC2-202ENST00000544223 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 APOA5Q6Q788 366 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
HCFC2-202ENST00000544223 MAPKAPK5Q8IW41 473 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 SP8Q8IXZ3 490 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 MPNDQ8N594 471 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 STK32BQ9NY57 414 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 BAZ2BQ9UIF8 2168 aaKnown RBP16.06■□□□□ 0.16
HCFC2-202ENST00000544223 SLX4Q8IY92 1834 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 SCNN1DP51172 638 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 SLC44A5Q8NCS7 719 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 FBXO41Q8TF61 875 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 STAG1Q8WVM7 1258 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 PANK2Q9BZ23 570 aa16.06■□□□□ 0.16
HCFC2-202ENST00000544223 PDE6BP35913 854 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 PCDHAC2Q9Y5I4 1007 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 DUOX1Q9NRD9 1551 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 SLURP2P0DP57 97 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 METAP2P50579 478 aaKnown RBP eCLIP16.05■□□□□ 0.16
HCFC2-202ENST00000544223 CERS5Q8N5B7 392 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 FLAD1Q8NFF5 587 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 WDR66Q8TBY9 1149 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 MASTLQ96GX5 879 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 PODXL2Q9NZ53 605 aa16.05■□□□□ 0.16
HCFC2-202ENST00000544223 SALL1Q9NSC2 1324 aa16.04■□□□□ 0.16
HCFC2-202ENST00000544223 hCG_1642624A0A1W2PR95 340 aa16.04■□□□□ 0.16
HCFC2-202ENST00000544223 CPLX1O14810 134 aa16.04■□□□□ 0.16
HCFC2-202ENST00000544223 IL1R1P14778 569 aa16.04■□□□□ 0.16
HCFC2-202ENST00000544223 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
HCFC2-202ENST00000544223 NRXN2Q9P2S2 1712 aa16.04■□□□□ 0.16
HCFC2-202ENST00000544223 USP5P45974 858 aa16.04■□□□□ 0.16
HCFC2-202ENST00000544223 EVCP57679 992 aa16.04■□□□□ 0.16
HCFC2-202ENST00000544223 CRNKL1Q9BZJ0 848 aaKnown RBP16.04■□□□□ 0.16
HCFC2-202ENST00000544223 FAM217BQ9NTX9 383 aaPredicted RBP16.04■□□□□ 0.16
HCFC2-202ENST00000544223 BTDP43251 543 aa16.03■□□□□ 0.16
HCFC2-202ENST00000544223 PLCD1P51178 756 aa16.03■□□□□ 0.16
HCFC2-202ENST00000544223 SKOR2Q2VWA4 1001 aaPredicted RBP16.03■□□□□ 0.16
HCFC2-202ENST00000544223 ZSCAN23Q3MJ62 389 aa16.03■□□□□ 0.16
HCFC2-202ENST00000544223 ORC3Q9UBD5 711 aaPredicted RBP16.03■□□□□ 0.16
HCFC2-202ENST00000544223 LTBP1Q14766 1721 aa16.03■□□□□ 0.16
HCFC2-202ENST00000544223 H0YIN7 160 aa16.03■□□□□ 0.16
HCFC2-202ENST00000544223 ZBTB43O43298 467 aa16.03■□□□□ 0.16
HCFC2-202ENST00000544223 TTC6Q86TZ1 520 aa16.03■□□□□ 0.16
HCFC2-202ENST00000544223 IL27Q8NEV9 243 aa16.03■□□□□ 0.16
HCFC2-202ENST00000544223 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
HCFC2-202ENST00000544223 TNKSO95271 1327 aa16.02■□□□□ 0.16
HCFC2-202ENST00000544223 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
HCFC2-202ENST00000544223 ADAMTSL1Q8N6G6 1762 aa16.02■□□□□ 0.16
HCFC2-202ENST00000544223 SYCE3A1L190 88 aa16.02■□□□□ 0.16
HCFC2-202ENST00000544223 PDCP20941 246 aa16.02■□□□□ 0.16
HCFC2-202ENST00000544223 GUCY1A2P33402 732 aa16.02■□□□□ 0.16
HCFC2-202ENST00000544223 RTFDC1Q9BY42 306 aaPredicted RBP16.02■□□□□ 0.16
HCFC2-202ENST00000544223 SLC12A7Q9Y666 1083 aa16.02■□□□□ 0.16
HCFC2-202ENST00000544223 CCDC69A6NI79 296 aa16.02■□□□□ 0.15
HCFC2-202ENST00000544223 GOLGA8AA7E2F4 631 aa16.02■□□□□ 0.15
HCFC2-202ENST00000544223 ZBTB7AO95365 584 aa16.02■□□□□ 0.15
HCFC2-202ENST00000544223 POLR3DP05423 398 aaPredicted RBP16.02■□□□□ 0.15
HCFC2-202ENST00000544223 ALDH1B1P30837 517 aa16.02■□□□□ 0.15
HCFC2-202ENST00000544223 RESTQ13127 1097 aa16.02■□□□□ 0.15
HCFC2-202ENST00000544223 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.15
HCFC2-202ENST00000544223 WTAPQ15007 396 aa16.02■□□□□ 0.15
HCFC2-202ENST00000544223 SPTY2D1Q68D10 685 aaPredicted RBP16.02■□□□□ 0.15
HCFC2-202ENST00000544223 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.15
HCFC2-202ENST00000544223 KRT23Q9C075 422 aa16.02■□□□□ 0.15
HCFC2-202ENST00000544223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.01■□□□□ 0.15
HCFC2-202ENST00000544223 C21orf2O43822 256 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 PICALMQ13492 652 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 FBXL16Q8N461 479 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 ENAHQ8N8S7 591 aaPredicted RBP16.01■□□□□ 0.15
HCFC2-202ENST00000544223 LRRC37AA6NMS7 1700 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 PDS5AQ29RF7 1337 aaKnown RBP16.01■□□□□ 0.15
HCFC2-202ENST00000544223 GOLGA6L3A6NEY3 463 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 G3V3G9 751 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 PIBF1Q8WXW3 757 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 LLPHQ9BRT6 129 aaKnown RBP16.01■□□□□ 0.15
HCFC2-202ENST00000544223 UBAC1Q9BSL1 405 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 CNNM2Q9H8M5 875 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 MROH7-TTC4A0A0A0MT08 1334 aa16.01■□□□□ 0.15
HCFC2-202ENST00000544223 XRCC6P12956 609 aaKnown RBP eCLIP16■□□□□ 0.15
HCFC2-202ENST00000544223 C15orf52Q6ZUT6 534 aaKnown RBP16■□□□□ 0.15
HCFC2-202ENST00000544223 TMEM87BQ96K49 555 aa16■□□□□ 0.15
HCFC2-202ENST00000544223 TIAM2Q8IVF5 1701 aa16■□□□□ 0.15
HCFC2-202ENST00000544223 KIF28PB7ZC32 967 aa16■□□□□ 0.15
HCFC2-202ENST00000544223 CACNB3P54284 484 aa16■□□□□ 0.15
HCFC2-202ENST00000544223 AOC3Q16853 763 aa16■□□□□ 0.15
HCFC2-202ENST00000544223 RASGRP2Q7LDG7 609 aa16■□□□□ 0.15
HCFC2-202ENST00000544223 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
HCFC2-202ENST00000544223 ESR2Q92731 530 aa15.99■□□□□ 0.15
HCFC2-202ENST00000544223 PPP1R1BQ9UD71 204 aaPredicted RBP15.99■□□□□ 0.15
HCFC2-202ENST00000544223 MKRN1Q9UHC7 482 aaKnown RBP15.99■□□□□ 0.15
HCFC2-202ENST00000544223 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
HCFC2-202ENST00000544223 USP17L3A6NCW0 530 aa15.99■□□□□ 0.15
HCFC2-202ENST00000544223 USP17L4A6NCW7 530 aa15.99■□□□□ 0.15
HCFC2-202ENST00000544223 BAG6P46379 1132 aa15.99■□□□□ 0.15
HCFC2-202ENST00000544223 NTRK3Q16288 839 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms