RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TLL2Q9Y6L7 1015 aa18.23■□□□□ 0.51
CD9-210ENST00000543916 COL2A1P02458 1487 aaPredicted RBP18.22■□□□□ 0.51
CD9-210ENST00000543916 TRIM6-TRIM34B2RNG4 842 aa18.22■□□□□ 0.51
CD9-210ENST00000543916 NPM3O75607 178 aaKnown RBP18.22■□□□□ 0.51
CD9-210ENST00000543916 ZFYP08048 801 aaPredicted RBP18.22■□□□□ 0.51
CD9-210ENST00000543916 SUPT20HL1Q3ZLR7 823 aa18.22■□□□□ 0.51
CD9-210ENST00000543916 SAPCD2Q86UD0 394 aa18.22■□□□□ 0.51
CD9-210ENST00000543916 CERS3Q8IU89 383 aa18.22■□□□□ 0.51
CD9-210ENST00000543916 C2orf69Q8N8R5 385 aa18.22■□□□□ 0.51
CD9-210ENST00000543916 PUS7LQ9H0K6 701 aaKnown RBP18.22■□□□□ 0.51
CD9-210ENST00000543916 ARMT1Q9H993 441 aa18.22■□□□□ 0.51
CD9-210ENST00000543916 FLT1P17948 1338 aa18.22■□□□□ 0.51
CD9-210ENST00000543916 ATRNL1Q5VV63 1379 aa18.21■□□□□ 0.51
CD9-210ENST00000543916 DDTLA6NHG4 134 aaPredicted RBP18.21■□□□□ 0.51
CD9-210ENST00000543916 MBD4O95243 580 aa18.21■□□□□ 0.51
CD9-210ENST00000543916 GSPT1P15170 499 aaKnown RBP18.21■□□□□ 0.51
CD9-210ENST00000543916 TTC22Q5TAA0 569 aa18.21■□□□□ 0.51
CD9-210ENST00000543916 MAPKAPK5Q8IW41 473 aa18.21■□□□□ 0.51
CD9-210ENST00000543916 APPBP2Q92624 585 aa18.21■□□□□ 0.51
CD9-210ENST00000543916 OSBP2Q969R2 916 aa18.21■□□□□ 0.51
CD9-210ENST00000543916 RILPL2Q969X0 211 aa18.21■□□□□ 0.51
CD9-210ENST00000543916 OSBPL5Q9H0X9 879 aaPredicted RBP18.21■□□□□ 0.51
CD9-210ENST00000543916 FKBP1BP68106 108 aa18.2■□□□□ 0.5
CD9-210ENST00000543916 TTLL12Q14166 644 aaPredicted RBP18.2■□□□□ 0.5
CD9-210ENST00000543916 LRRFIP1Q32MZ4 808 aaKnown RBP18.2■□□□□ 0.5
CD9-210ENST00000543916 BAZ2AQ9UIF9 1905 aaKnown RBP18.19■□□□□ 0.5
CD9-210ENST00000543916 UBE2Q2LH0YL09 131 aa18.19■□□□□ 0.5
CD9-210ENST00000543916 M0R2C6 588 aa18.19■□□□□ 0.5
CD9-210ENST00000543916 USP5P45974 858 aa18.19■□□□□ 0.5
CD9-210ENST00000543916 HUNKP57058 714 aa18.19■□□□□ 0.5
CD9-210ENST00000543916 ZMYM1Q5SVZ6 1142 aa18.19■□□□□ 0.5
CD9-210ENST00000543916 ZSCAN29Q8IWY8 852 aaPredicted RBP18.19■□□□□ 0.5
CD9-210ENST00000543916 SEC62Q99442 399 aaKnown RBP18.19■□□□□ 0.5
CD9-210ENST00000543916 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
CD9-210ENST00000543916 ANGEL1Q9UNK9 670 aaKnown RBP18.19■□□□□ 0.5
CD9-210ENST00000543916 RASSF10A6NK89 507 aa18.18■□□□□ 0.5
CD9-210ENST00000543916 PRKAB2O43741 272 aa18.18■□□□□ 0.5
CD9-210ENST00000543916 USP2O75604 605 aaPredicted RBP18.18■□□□□ 0.5
CD9-210ENST00000543916 SLURP2P0DP57 97 aa18.18■□□□□ 0.5
CD9-210ENST00000543916 SDR42E1Q8WUS8 393 aa18.18■□□□□ 0.5
CD9-210ENST00000543916 AIDAQ96BJ3 306 aa18.18■□□□□ 0.5
CD9-210ENST00000543916 CSRNP1Q96S65 589 aa18.18■□□□□ 0.5
CD9-210ENST00000543916 MKRN1Q9UHC7 482 aaKnown RBP18.18■□□□□ 0.5
CD9-210ENST00000543916 SAP30BPQ9UHR5 308 aaKnown RBP18.18■□□□□ 0.5
CD9-210ENST00000543916 PPP1R12BO60237 982 aaPredicted RBP18.17■□□□□ 0.5
CD9-210ENST00000543916 SDSP20132 328 aa18.17■□□□□ 0.5
CD9-210ENST00000543916 MAP3K11Q16584 847 aa18.17■□□□□ 0.5
CD9-210ENST00000543916 MIGA2Q7L4E1 593 aa18.17■□□□□ 0.5
CD9-210ENST00000543916 ARMC9Q7Z3E5 817 aa18.17■□□□□ 0.5
CD9-210ENST00000543916 HOOK2Q96ED9 719 aa18.17■□□□□ 0.5
CD9-210ENST00000543916 STRBPQ96SI9 672 aaKnown RBP18.17■□□□□ 0.5
CD9-210ENST00000543916 THSD7BQ9C0I4 1608 aa18.16■□□□□ 0.5
CD9-210ENST00000543916 GPAA1O43292 621 aa18.16■□□□□ 0.5
CD9-210ENST00000543916 DEFB115Q30KQ5 88 aa18.16■□□□□ 0.5
CD9-210ENST00000543916 LDLRAD1Q5T700 205 aa18.16■□□□□ 0.5
CD9-210ENST00000543916 DNAJC5GQ8N7S2 189 aa18.16■□□□□ 0.5
CD9-210ENST00000543916 HHIPL1Q96JK4 782 aa18.16■□□□□ 0.5
CD9-210ENST00000543916 FAM227BQ96M60 508 aa18.16■□□□□ 0.5
CD9-210ENST00000543916 PALD1Q9ULE6 856 aa18.16■□□□□ 0.5
CD9-210ENST00000543916 LAMB1P07942 1786 aa18.16■□□□□ 0.5
CD9-210ENST00000543916 ATAD5Q96QE3 1844 aa18.15■□□□□ 0.5
CD9-210ENST00000543916 A0A0D9SFI3 127 aa18.15■□□□□ 0.5
CD9-210ENST00000543916 IREB2P48200 963 aaKnown RBP18.15■□□□□ 0.5
CD9-210ENST00000543916 NMIQ13287 307 aaPredicted RBP18.15■□□□□ 0.5
CD9-210ENST00000543916 SLC4A8Q2Y0W8 1093 aa18.15■□□□□ 0.5
CD9-210ENST00000543916 DCAF15Q66K64 600 aa18.15■□□□□ 0.5
CD9-210ENST00000543916 CYP4F22Q6NT55 531 aa18.15■□□□□ 0.5
CD9-210ENST00000543916 CCDC129Q6ZRS4 1044 aa18.15■□□□□ 0.5
CD9-210ENST00000543916 TICAM2Q86XR7 235 aa18.15■□□□□ 0.5
CD9-210ENST00000543916 KLRG1Q96E93 195 aa18.15■□□□□ 0.5
CD9-210ENST00000543916 DCP1AQ9NPI6 582 aaPredicted RBP18.15■□□□□ 0.5
CD9-210ENST00000543916 SLC4A4Q9Y6R1 1079 aa18.15■□□□□ 0.5
CD9-210ENST00000543916 CEP350Q5VT06 3117 aa18.14■□□□□ 0.5
CD9-210ENST00000543916 DOCK1Q14185 1865 aa18.14■□□□□ 0.49
CD9-210ENST00000543916 FAM196BA6NMK8 535 aa18.14■□□□□ 0.49
CD9-210ENST00000543916 MAP3K10Q02779 954 aa18.14■□□□□ 0.49
CD9-210ENST00000543916 RGMBQ6NW40 437 aa18.14■□□□□ 0.49
CD9-210ENST00000543916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.14■□□□□ 0.49
CD9-210ENST00000543916 CLMNQ96JQ2 1002 aa18.14■□□□□ 0.49
CD9-210ENST00000543916 ZNF341Q9BYN7 854 aa18.14■□□□□ 0.49
CD9-210ENST00000543916 DHX36Q9H2U1 1008 aaKnown RBP18.14■□□□□ 0.49
CD9-210ENST00000543916 ATP8A2Q9NTI2 1148 aa18.14■□□□□ 0.49
CD9-210ENST00000543916 VEGFBP49765 207 aa18.13■□□□□ 0.49
CD9-210ENST00000543916 EVX2Q03828 476 aa18.13■□□□□ 0.49
CD9-210ENST00000543916 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.13■□□□□ 0.49
CD9-210ENST00000543916 PAXIP1Q6ZW49 1069 aaPredicted RBP18.13■□□□□ 0.49
CD9-210ENST00000543916 CAPNS2Q96L46 248 aa18.13■□□□□ 0.49
CD9-210ENST00000543916 WRNIP1Q96S55 665 aa18.13■□□□□ 0.49
CD9-210ENST00000543916 HELLSQ9NRZ9 838 aa18.13■□□□□ 0.49
CD9-210ENST00000543916 ZNF112Q9UJU3 913 aa18.13■□□□□ 0.49
CD9-210ENST00000543916 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
CD9-210ENST00000543916 ZNF157P51786 506 aaPredicted RBP18.12■□□□□ 0.49
CD9-210ENST00000543916 GRM1Q13255 1194 aa18.12■□□□□ 0.49
CD9-210ENST00000543916 RASAL3Q86YV0 1011 aa18.12■□□□□ 0.49
CD9-210ENST00000543916 ANKRD13AQ8IZ07 590 aa18.12■□□□□ 0.49
CD9-210ENST00000543916 DNAJC18Q9H819 358 aa18.12■□□□□ 0.49
CD9-210ENST00000543916 EPB41L4AQ9HCS5 686 aaPredicted RBP18.12■□□□□ 0.49
CD9-210ENST00000543916 MCM9Q9NXL9 1143 aa18.12■□□□□ 0.49
CD9-210ENST00000543916 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.12■□□□□ 0.49
CD9-210ENST00000543916 PI4KBQ9UBF8 816 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms