RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 TIMM10P62072 90 aa13.79□□□□□ -0.2
COPS7A-217ENST00000543537 RABEP1Q15276 862 aa13.79□□□□□ -0.2
COPS7A-217ENST00000543537 CDAN1Q8IWY9 1227 aa13.79□□□□□ -0.2
COPS7A-217ENST00000543537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.79□□□□□ -0.2
COPS7A-217ENST00000543537 EAF2Q96CJ1 260 aaPredicted RBP13.79□□□□□ -0.2
COPS7A-217ENST00000543537 HOOK2Q96ED9 719 aa13.79□□□□□ -0.2
COPS7A-217ENST00000543537 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
COPS7A-217ENST00000543537 CLMNQ96JQ2 1002 aa13.79□□□□□ -0.2
COPS7A-217ENST00000543537 TMOD2Q9NZR1 351 aa13.79□□□□□ -0.2
COPS7A-217ENST00000543537 FZD1Q9UP38 647 aa13.79□□□□□ -0.2
COPS7A-217ENST00000543537 DAGLAQ9Y4D2 1042 aa13.79□□□□□ -0.2
COPS7A-217ENST00000543537 CAPN15O75808 1086 aa13.78□□□□□ -0.2
COPS7A-217ENST00000543537 SEC24BO95487 1268 aa13.78□□□□□ -0.2
COPS7A-217ENST00000543537 LDHBP07195 334 aaKnown RBP13.78□□□□□ -0.2
COPS7A-217ENST00000543537 TFCP2Q12800 502 aa13.78□□□□□ -0.2
COPS7A-217ENST00000543537 RASGRF1Q13972 1273 aa13.78□□□□□ -0.2
COPS7A-217ENST00000543537 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-217ENST00000543537 OTUD7AQ8TE49 926 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-217ENST00000543537 XAGE2Q96GT9 111 aa13.78□□□□□ -0.2
COPS7A-217ENST00000543537 ZNF512BQ96KM6 892 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-217ENST00000543537 ESYT1Q9BSJ8 1104 aa13.78□□□□□ -0.2
COPS7A-217ENST00000543537 USP26Q9BXU7 913 aa13.78□□□□□ -0.2
COPS7A-217ENST00000543537 DIAPH3Q9NSV4 1193 aa13.78□□□□□ -0.2
COPS7A-217ENST00000543537 GAKO14976 1311 aa13.78□□□□□ -0.2
COPS7A-217ENST00000543537 GJA5P36382 358 aa13.77□□□□□ -0.21
COPS7A-217ENST00000543537 MAP3K9P80192 1104 aa13.77□□□□□ -0.21
COPS7A-217ENST00000543537 IFNL1Q8IU54 200 aa13.77□□□□□ -0.21
COPS7A-217ENST00000543537 HSCBQ8IWL3 235 aa13.77□□□□□ -0.21
COPS7A-217ENST00000543537 FAM151AQ8WW52 585 aa13.77□□□□□ -0.21
COPS7A-217ENST00000543537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-217ENST00000543537 OTOFQ9HC10 1997 aa13.76□□□□□ -0.21
COPS7A-217ENST00000543537 GPR25O00155 361 aa13.76□□□□□ -0.21
COPS7A-217ENST00000543537 ARID4AP29374 1257 aaPredicted RBP13.76□□□□□ -0.21
COPS7A-217ENST00000543537 DGKZQ13574 1117 aa13.76□□□□□ -0.21
COPS7A-217ENST00000543537 DIXDC1Q155Q3 683 aa13.76□□□□□ -0.21
COPS7A-217ENST00000543537 GORABQ5T7V8 394 aa13.76□□□□□ -0.21
COPS7A-217ENST00000543537 CDC42EP5Q6NZY7 148 aa13.76□□□□□ -0.21
COPS7A-217ENST00000543537 TMED8Q6PL24 325 aaPredicted RBP13.76□□□□□ -0.21
COPS7A-217ENST00000543537 IL17RAQ96F46 866 aa13.76□□□□□ -0.21
COPS7A-217ENST00000543537 ST18O60284 1047 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 TBC1D8O95759 1140 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
COPS7A-217ENST00000543537 UQCRFS1P1P0C7P4 283 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 RGS19P49795 217 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 CACNB3P54284 484 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
COPS7A-217ENST00000543537 VGLL4Q14135 290 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 TTF1Q15361 905 aaPredicted RBP13.75□□□□□ -0.21
COPS7A-217ENST00000543537 PKN2Q16513 984 aaKnown RBP13.75□□□□□ -0.21
COPS7A-217ENST00000543537 SPTY2D1Q68D10 685 aaPredicted RBP13.75□□□□□ -0.21
COPS7A-217ENST00000543537 CTU1Q7Z7A3 348 aaKnown RBP13.75□□□□□ -0.21
COPS7A-217ENST00000543537 SLF2Q8IX21 1173 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 ZNF296Q8WUU4 475 aaPredicted RBP13.75□□□□□ -0.21
COPS7A-217ENST00000543537 OPTNQ96CV9 577 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 MS4A4AQ96JQ5 239 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 HAUS7Q99871 368 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 IDI2Q9BXS1 227 aa13.75□□□□□ -0.21
COPS7A-217ENST00000543537 SPDYE5A6NIY4 337 aa13.74□□□□□ -0.21
COPS7A-217ENST00000543537 IGF2BP3O00425 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
COPS7A-217ENST00000543537 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
COPS7A-217ENST00000543537 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
COPS7A-217ENST00000543537 DCAF15Q66K64 600 aa13.74□□□□□ -0.21
COPS7A-217ENST00000543537 ZSCAN25Q6NSZ9 544 aa13.74□□□□□ -0.21
COPS7A-217ENST00000543537 SNRKQ9NRH2 765 aa13.74□□□□□ -0.21
COPS7A-217ENST00000543537 HMG20BQ9P0W2 317 aa13.74□□□□□ -0.21
COPS7A-217ENST00000543537 FAM198AQ9UFP1 575 aa13.74□□□□□ -0.21
COPS7A-217ENST00000543537 ZNF112Q9UJU3 913 aa13.74□□□□□ -0.21
COPS7A-217ENST00000543537 ATRNL1Q5VV63 1379 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 SGSM2O43147 1006 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
COPS7A-217ENST00000543537 MAP3K10Q02779 954 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 NFIAQ12857 509 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 OTUD7BQ6GQQ9 843 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 ERO1BQ86YB8 467 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 NEUROD6Q96NK8 337 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 PTPN18Q99952 460 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 CCDC8Q9H0W5 538 aaPredicted RBP13.73□□□□□ -0.21
COPS7A-217ENST00000543537 BCL11AQ9H165 835 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 R3HDMLQ9H3Y0 253 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 CSADQ9Y600 493 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 SNCAIPQ9Y6H5 919 aa13.73□□□□□ -0.21
COPS7A-217ENST00000543537 GPR75-ASB3A0A0A6YYF3 556 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 FKTNO75072 461 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 ENTPD3O75355 529 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 GTF2A2P52657 109 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 SPATA5Q8NB90 893 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 ZNF384Q8TF68 577 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 WRNIP1Q96S55 665 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 ZNF341Q9BYN7 854 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 ELP3Q9H9T3 547 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 ZCCHC17Q9NP64 241 aaKnown RBP13.72□□□□□ -0.21
COPS7A-217ENST00000543537 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 DBNLQ9UJU6 430 aaKnown RBP13.72□□□□□ -0.21
COPS7A-217ENST00000543537 MYH2Q9UKX2 1941 aa13.72□□□□□ -0.21
COPS7A-217ENST00000543537 MROH7-TTC4A0A0A0MT08 1334 aa13.71□□□□□ -0.21
COPS7A-217ENST00000543537 WDHD1O75717 1129 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-217ENST00000543537 ZKSCAN1P17029 563 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-217ENST00000543537 MCAMP43121 646 aa13.71□□□□□ -0.21
COPS7A-217ENST00000543537 NOL9Q5SY16 702 aaKnown RBP13.71□□□□□ -0.21
COPS7A-217ENST00000543537 DZIP1Q86YF9 867 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms