RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 OTUD5Q96G74 571 aa16.11■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CCDC8Q9H0W5 538 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CCL15-CCL14A0A0B4J2E2 113 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 DDTLA6NHG4 134 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CCDC85CA6NKD9 419 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 IRF6O14896 467 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 FKTNO75072 461 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 PPIL2Q13356 520 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CCL15Q16663 113 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CCDC158Q5M9N0 1113 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 TTC39AQ5SRH9 613 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 RPAP2Q8IXW5 612 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 RAI14Q9P0K7 980 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 DDX19BQ9UMR2 479 aa16.1■□□□□ 0.17
TNFRSF1A-215ENST00000543359 MAP4K4O95819 1239 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 LDHCP07864 332 aa16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 RGS19P49795 217 aa16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 GSTO1P78417 241 aa16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CAP1Q01518 475 aa16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 PPATQ06203 517 aa16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 NOL9Q5SY16 702 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 FAM43AQ8N2R8 423 aa16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 PIH1D3Q9NQM4 214 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 DOCK2Q92608 1830 aa16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 BRCA2P51587 3418 aa16.09■□□□□ 0.17
TNFRSF1A-215ENST00000543359 ZAP70P43403 619 aa16.08■□□□□ 0.16
TNFRSF1A-215ENST00000543359 PPP4CP60510 307 aa16.08■□□□□ 0.16
TNFRSF1A-215ENST00000543359 MOGSQ13724 837 aa16.08■□□□□ 0.16
TNFRSF1A-215ENST00000543359 PDE3AQ14432 1141 aa16.08■□□□□ 0.16
TNFRSF1A-215ENST00000543359 OTUD7BQ6GQQ9 843 aa16.08■□□□□ 0.16
TNFRSF1A-215ENST00000543359 ADGRA1Q86SQ6 560 aa16.08■□□□□ 0.16
TNFRSF1A-215ENST00000543359 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
TNFRSF1A-215ENST00000543359 PICALMQ13492 652 aa16.07■□□□□ 0.16
TNFRSF1A-215ENST00000543359 PKN2Q16513 984 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-215ENST00000543359 ERC1Q8IUD2 1116 aa16.07■□□□□ 0.16
TNFRSF1A-215ENST00000543359 RHPN1Q8TCX5 695 aa16.07■□□□□ 0.16
TNFRSF1A-215ENST00000543359 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
TNFRSF1A-215ENST00000543359 MAST2Q6P0Q8 1798 aa16.06■□□□□ 0.16
TNFRSF1A-215ENST00000543359 BTBD19C9JJ37 291 aa16.06■□□□□ 0.16
TNFRSF1A-215ENST00000543359 IGSF3O75054 1194 aa16.06■□□□□ 0.16
TNFRSF1A-215ENST00000543359 CETPP11597 493 aa16.06■□□□□ 0.16
TNFRSF1A-215ENST00000543359 SNAPC2Q13487 334 aa16.06■□□□□ 0.16
TNFRSF1A-215ENST00000543359 NAA16Q6N069 864 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-215ENST00000543359 SH3RF3Q8TEJ3 882 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-215ENST00000543359 HPS5Q9UPZ3 1129 aa16.06■□□□□ 0.16
TNFRSF1A-215ENST00000543359 NDUFB9Q9Y6M9 179 aa16.06■□□□□ 0.16
TNFRSF1A-215ENST00000543359 COL2A1P02458 1487 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-215ENST00000543359 TBC1D12O60347 775 aa16.05■□□□□ 0.16
TNFRSF1A-215ENST00000543359 AACSQ86V21 672 aa16.05■□□□□ 0.16
TNFRSF1A-215ENST00000543359 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-215ENST00000543359 OSBPL5Q9H0X9 879 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-215ENST00000543359 IL1RAPL2Q9NP60 686 aa16.05■□□□□ 0.16
TNFRSF1A-215ENST00000543359 ZCCHC17Q9NP64 241 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-215ENST00000543359 CDK5RAP2Q96SN8 1893 aa16.05■□□□□ 0.16
TNFRSF1A-215ENST00000543359 HSP90AB4PQ58FF6 505 aa16.04■□□□□ 0.16
TNFRSF1A-215ENST00000543359 OTOP1Q7RTM1 612 aa16.04■□□□□ 0.16
TNFRSF1A-215ENST00000543359 ZSCAN29Q8IWY8 852 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-215ENST00000543359 ANTXR1Q9H6X2 564 aa16.04■□□□□ 0.16
TNFRSF1A-215ENST00000543359 AATFQ9NY61 560 aaKnown RBP eCLIP16.04■□□□□ 0.16
TNFRSF1A-215ENST00000543359 PHIPQ8WWQ0 1821 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 MKI67P46013 3256 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 CTNND1O60716 968 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 HMMRO75330 724 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 PTPRAP18433 802 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 SP3Q02447 781 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 TAF1CQ15572 869 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 FBXO46Q6PJ61 603 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 TEX11Q8IYF3 940 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 SCYL3Q8IZE3 742 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 CD99L2Q8TCZ2 262 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 KIF1BPQ96EK5 621 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 ZFYVE28Q9HCC9 887 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 SIPA1L1O43166 1804 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 FOCADQ5VW36 1801 aa16.03■□□□□ 0.16
TNFRSF1A-215ENST00000543359 CXCL11O14625 94 aa16.02■□□□□ 0.16
TNFRSF1A-215ENST00000543359 GPAT2Q6NUI2 795 aa16.02■□□□□ 0.16
TNFRSF1A-215ENST00000543359 ANKRD23Q86SG2 305 aa16.02■□□□□ 0.16
TNFRSF1A-215ENST00000543359 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1A-215ENST00000543359 AFG3L2Q9Y4W6 797 aa16.02■□□□□ 0.16
TNFRSF1A-215ENST00000543359 ZHX2Q9Y6X8 837 aa16.02■□□□□ 0.16
TNFRSF1A-215ENST00000543359 ADGRA2Q96PE1 1338 aa16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 FAM196BA6NMK8 535 aa16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 TLR2O60603 784 aa16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 RAB11FIP3O75154 756 aa16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 BAG3O95817 575 aa16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 DYNLL1P63167 89 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 METTL16Q86W50 562 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 ERO1AQ96HE7 468 aa16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 TRIM17Q9Y577 477 aa16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 PTPRFP10586 1907 aa16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 DOCK1Q14185 1865 aa16.01■□□□□ 0.15
TNFRSF1A-215ENST00000543359 FLT1P17948 1338 aa16■□□□□ 0.15
TNFRSF1A-215ENST00000543359 A0A0G2JLL6 359 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-215ENST00000543359 APBB1O00213 710 aa16■□□□□ 0.15
TNFRSF1A-215ENST00000543359 PLCG2P16885 1265 aa16■□□□□ 0.15
TNFRSF1A-215ENST00000543359 CYP7A1P22680 504 aa16■□□□□ 0.15
TNFRSF1A-215ENST00000543359 C17orf99Q6UX52 265 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms