RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.24□□□□□ -1.09
CIT-213ENST00000543324 RIC3Q7Z5B4 369 aa8.24□□□□□ -1.09
CIT-213ENST00000543324 C8orf58Q8NAV2 365 aa8.24□□□□□ -1.09
CIT-213ENST00000543324 HERVK_113Q902F9 699 aa8.24□□□□□ -1.09
CIT-213ENST00000543324 BADQ92934 168 aa8.24□□□□□ -1.09
CIT-213ENST00000543324 ZBED3Q96IU2 234 aaPredicted RBP8.24□□□□□ -1.09
CIT-213ENST00000543324 MFSD14AQ96MC6 490 aa8.24□□□□□ -1.09
CIT-213ENST00000543324 HMX1Q9NP08 348 aaPredicted RBP8.24□□□□□ -1.09
CIT-213ENST00000543324 FAM86C1Q9NVL1 165 aa8.24□□□□□ -1.09
CIT-213ENST00000543324 COG5Q9UP83 839 aa8.24□□□□□ -1.09
CIT-213ENST00000543324 IL16Q14005 1332 aa8.24□□□□□ -1.09
CIT-213ENST00000543324 COL4A6Q14031 1691 aa8.24□□□□□ -1.09
CIT-213ENST00000543324 GCN1Q92616 2671 aaKnown RBP8.23□□□□□ -1.09
CIT-213ENST00000543324 HMGCRP04035 888 aa8.23□□□□□ -1.09
CIT-213ENST00000543324 GPSM2P81274 684 aa8.23□□□□□ -1.09
CIT-213ENST00000543324 AIMP1Q12904 312 aaKnown RBP8.23□□□□□ -1.09
CIT-213ENST00000543324 SF3B3Q15393 1217 aaKnown RBP8.23□□□□□ -1.09
CIT-213ENST00000543324 NBPF12Q5TAG4 269 aaPredicted RBP8.23□□□□□ -1.09
CIT-213ENST00000543324 WWC1Q8IX03 1113 aa8.23□□□□□ -1.09
CIT-213ENST00000543324 GJD3Q8N144 294 aa8.23□□□□□ -1.09
CIT-213ENST00000543324 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
CIT-213ENST00000543324 TSPYL6Q8N831 410 aa8.23□□□□□ -1.09
CIT-213ENST00000543324 TBC1D16Q8TBP0 767 aa8.23□□□□□ -1.09
CIT-213ENST00000543324 ZC3H12CQ9C0D7 883 aaKnown RBP8.23□□□□□ -1.09
CIT-213ENST00000543324 ASPMQ8IZT6 3477 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 VPS13AQ96RL7 3174 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 USP17L3A6NCW0 530 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 USP17L4A6NCW7 530 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 HCLS1P14317 486 aaPredicted RBP8.22□□□□□ -1.09
CIT-213ENST00000543324 VGLL4Q14135 290 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 SKIV2LQ15477 1246 aaKnown RBP8.22□□□□□ -1.09
CIT-213ENST00000543324 IER5LQ5T953 404 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 DDX46Q7L014 1031 aaKnown RBP8.22□□□□□ -1.09
CIT-213ENST00000543324 ASCL5Q7RTU5 278 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 USP17L1Q7RTZ2 530 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 MICALL1Q8N3F8 863 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 ZKSCAN4Q969J2 545 aaPredicted RBP8.22□□□□□ -1.09
CIT-213ENST00000543324 PRRX2Q99811 253 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 PBX4Q9BYU1 374 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 PHAXQ9H814 394 aaKnown RBP8.22□□□□□ -1.09
CIT-213ENST00000543324 TRMT112Q9UI30 125 aaKnown RBP8.22□□□□□ -1.09
CIT-213ENST00000543324 LAS1LQ9Y4W2 734 aaKnown RBP8.22□□□□□ -1.09
CIT-213ENST00000543324 ARAP2Q8WZ64 1704 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 ZNF804BA4D1E1 1349 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 PRRC2BQ5JSZ5 2229 aaKnown RBP8.22□□□□□ -1.09
CIT-213ENST00000543324 FRMPD3Q5JV73 1810 aa8.22□□□□□ -1.09
CIT-213ENST00000543324 POTEB3A0JP26 581 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 SPDYE5A6NIY4 337 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 PROB1E7EW31 1015 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 G3V3G9 751 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 DCXO43602 365 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 PBX2P40425 430 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 MMP14P50281 582 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 EPHB4P54760 987 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 TRIM32Q13049 653 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 DCAF8Q5TAQ9 597 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 POTEBQ6S5H4 581 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 DGLUCYQ7Z3D6 616 aa8.21□□□□□ -1.1
CIT-213ENST00000543324 WDR87Q6ZQQ6 2873 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 BRWD1Q9NSI6 2320 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 ATP5J2-PTCD1G3V325 749 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 PDHXO00330 501 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 TNPO2O14787 897 aaKnown RBP8.2□□□□□ -1.1
CIT-213ENST00000543324 PCCAP05165 728 aaPredicted RBP8.2□□□□□ -1.1
CIT-213ENST00000543324 SNAPC2Q13487 334 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 ANKRD23Q86SG2 305 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 CCDC191Q8NCU4 936 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 TSR2Q969E8 191 aaKnown RBP8.2□□□□□ -1.1
CIT-213ENST00000543324 FAM89AQ96GI7 184 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 METTL22Q9BUU2 404 aaPredicted RBP8.2□□□□□ -1.1
CIT-213ENST00000543324 ZNF521Q96K83 1311 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 ZFYVE26Q68DK2 2539 aa8.2□□□□□ -1.1
CIT-213ENST00000543324 KMT2EQ8IZD2 1858 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 SOWAHBA6NEL2 793 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 PRR23AA6NEV1 266 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 IRS4O14654 1257 aaPredicted RBP8.19□□□□□ -1.1
CIT-213ENST00000543324 IRF6O14896 467 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 IGKV5-2P06315 115 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 RTP1P59025 263 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 DACT2Q5SW24 774 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 CCDC30Q5VVM6 783 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 FAM178BQ8IXR5 827 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.19□□□□□ -1.1
CIT-213ENST00000543324 CELF1Q92879 486 aaKnown RBP8.19□□□□□ -1.1
CIT-213ENST00000543324 MXD3Q9BW11 206 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 ALG13Q9NP73 1137 aaKnown RBP8.19□□□□□ -1.1
CIT-213ENST00000543324 TRPC6Q9Y210 931 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 MYO3BQ8WXR4 1341 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 RLFQ13129 1914 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 AK9Q5TCS8 1911 aa8.19□□□□□ -1.1
CIT-213ENST00000543324 ELL2O00472 640 aaPredicted RBP8.18□□□□□ -1.1
CIT-213ENST00000543324 ATXN8OSP0DMR3 200 aa8.18□□□□□ -1.1
CIT-213ENST00000543324 GOLGA2Q08379 1002 aa8.18□□□□□ -1.1
CIT-213ENST00000543324 MAP3K21Q5TCX8 1036 aa8.18□□□□□ -1.1
CIT-213ENST00000543324 CHMP4AQ9BY43 222 aa8.18□□□□□ -1.1
CIT-213ENST00000543324 SENP6Q9GZR1 1112 aaPredicted RBP8.18□□□□□ -1.1
CIT-213ENST00000543324 PRDM5Q9NQX1 630 aaPredicted RBP8.18□□□□□ -1.1
CIT-213ENST00000543324 PODXL2Q9NZ53 605 aa8.18□□□□□ -1.1
CIT-213ENST00000543324 KCNH4Q9UQ05 1017 aa8.18□□□□□ -1.1
CIT-213ENST00000543324 TECTAO75443 2155 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms