RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 USP8P40818 1118 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 PSEN1P49768 467 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 PDE4BQ07343 736 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 MLECQ14165 292 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 MTF1Q14872 753 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 PROSER3Q2NL68 480 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 MAP9Q49MG5 647 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 WWC2Q6AWC2 1192 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 MICALL1Q8N3F8 863 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 MLKLQ8NB16 471 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 LGR6Q9HBX8 967 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 PCDHA5Q9Y5H7 936 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 GOLGA8BA8MQT2 603 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 CPLX1O14810 134 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 CHGBP05060 677 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 TFCP2Q12800 502 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 RASGRP2Q7LDG7 609 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 GPATCH11Q8N954 259 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 NGDNQ8NEJ9 315 aaKnown RBP11.08□□□□□ -0.64
TCF4-208ENST00000543082 MYO1AQ9UBC5 1043 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 SIPA1L3O60292 1781 aaPredicted RBP11.08□□□□□ -0.64
TCF4-208ENST00000543082 NWD2Q9ULI1 1742 aa11.07□□□□□ -0.64
TCF4-208ENST00000543082 ERLIN2O94905 339 aa11.07□□□□□ -0.64
TCF4-208ENST00000543082 GSCP56915 257 aaPredicted RBP11.07□□□□□ -0.64
TCF4-208ENST00000543082 NLRP6P59044 892 aa11.07□□□□□ -0.64
TCF4-208ENST00000543082 SART3Q15020 963 aaKnown RBP11.07□□□□□ -0.64
TCF4-208ENST00000543082 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
TCF4-208ENST00000543082 RAD9BQ6WBX8 426 aa11.07□□□□□ -0.64
TCF4-208ENST00000543082 CHST3Q7LGC8 479 aa11.07□□□□□ -0.64
TCF4-208ENST00000543082 SECISBP2LQ93073 1101 aaKnown RBP11.07□□□□□ -0.64
TCF4-208ENST00000543082 LTV1Q96GA3 475 aaPredicted RBP11.07□□□□□ -0.64
TCF4-208ENST00000543082 NDUFB9Q9Y6M9 179 aa11.07□□□□□ -0.64
TCF4-208ENST00000543082 KLF18A0A0U1RQI7 1052 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 A0A1B0GTH6 734 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 SHOX2O60902 331 aaPredicted RBP11.06□□□□□ -0.64
TCF4-208ENST00000543082 PRPF6O94906 941 aaKnown RBP11.06□□□□□ -0.64
TCF4-208ENST00000543082 HSPD1P10809 573 aaKnown RBP11.06□□□□□ -0.64
TCF4-208ENST00000543082 CDC27P30260 824 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 NR1I3Q14994 352 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 PTPAQ15257 358 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 SLC35F6Q8N357 371 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 CCDC148Q8NFR7 591 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 SMARCC1Q92922 1105 aaPredicted RBP11.06□□□□□ -0.64
TCF4-208ENST00000543082 CCDC51Q96ER9 411 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 DBNDD2Q9BQY9 259 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 ANKRD65E5RJM6 399 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 BMP6P22004 513 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 NEXNQ0ZGT2 675 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 LONRF3Q496Y0 759 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 HSP90AA4PQ58FG1 418 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 AKAP4Q5JQC9 854 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 USHBP1Q8N6Y0 703 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 TRIML1Q8N9V2 468 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 MAN1B1Q9UKM7 699 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 KCNH3Q9ULD8 1083 aa11.06□□□□□ -0.64
TCF4-208ENST00000543082 CDHR2Q9BYE9 1310 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 PARP4Q9UKK3 1724 aaKnown RBP11.05□□□□□ -0.64
TCF4-208ENST00000543082 SYF2O95926 243 aaKnown RBP11.05□□□□□ -0.64
TCF4-208ENST00000543082 E2F4Q16254 413 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
TCF4-208ENST00000543082 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
TCF4-208ENST00000543082 PLEKHA4Q9H4M7 779 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 DDX21Q9NR30 783 aaKnown RBP eCLIP11.05□□□□□ -0.64
TCF4-208ENST00000543082 PAG1Q9NWQ8 432 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 PHRF1Q9P1Y6 1649 aaKnown RBP11.05□□□□□ -0.64
TCF4-208ENST00000543082 KDM6AO15550 1401 aaPredicted RBP11.05□□□□□ -0.64
TCF4-208ENST00000543082 TNRQ92752 1358 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 MFAP3LO75121 409 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 IGKV5-2P06315 115 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 RFX5P48382 616 aaPredicted RBP11.05□□□□□ -0.64
TCF4-208ENST00000543082 FMR1Q06787 632 aaKnown RBP eCLIP11.05□□□□□ -0.64
TCF4-208ENST00000543082 TTC39AQ5SRH9 613 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 NT5DC1Q5TFE4 455 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 VPS37DQ86XT2 251 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 CNGA4Q8IV77 575 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 FOXP4Q8IVH2 680 aaPredicted RBP11.05□□□□□ -0.64
TCF4-208ENST00000543082 ANKRD20A12PQ8NF67 263 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 CXorf56Q9H5V9 222 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.05□□□□□ -0.64
TCF4-208ENST00000543082 HPCAL4Q9UM19 191 aa11.05□□□□□ -0.64
TCF4-208ENST00000543082 MAST3O60307 1309 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 RGPD2P0DJD1 1756 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 CCDC196A0A1B0GTZ2 297 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 NEURL1BA8MQ27 555 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 CLGNO14967 610 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 PRC1O43663 620 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 CCDC172P0C7W6 258 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 FECHP22830 423 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 ERCC5P28715 1186 aaPredicted RBP11.04□□□□□ -0.64
TCF4-208ENST00000543082 PLCD1P51178 756 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 MDM2Q00987 491 aaPredicted RBP11.04□□□□□ -0.64
TCF4-208ENST00000543082 PTPN12Q05209 780 aaKnown RBP11.04□□□□□ -0.64
TCF4-208ENST00000543082 MORC3Q14149 939 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 POSTNQ15063 836 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 RPAINQ86UA6 219 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 IGSF22Q8N9C0 903 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
TCF4-208ENST00000543082 MYO6Q9UM54 1294 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms