RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 MYBBP1AQ9BQG0 1328 aaKnown RBP11.9□□□□□ -0.5
C2CD3-219ENST00000542930 APAF1O14727 1248 aa11.9□□□□□ -0.5
C2CD3-219ENST00000542930 MDM2Q00987 491 aaPredicted RBP11.9□□□□□ -0.5
C2CD3-219ENST00000542930 TCP10Q12799 353 aa11.9□□□□□ -0.5
C2CD3-219ENST00000542930 CAVIN4Q5BKX8 364 aa11.9□□□□□ -0.5
C2CD3-219ENST00000542930 DDX60LQ5H9U9 1706 aaKnown RBP11.9□□□□□ -0.5
C2CD3-219ENST00000542930 EPHA10Q5JZY3 1008 aa11.9□□□□□ -0.5
C2CD3-219ENST00000542930 SCYL3Q8IZE3 742 aa11.9□□□□□ -0.5
C2CD3-219ENST00000542930 ANKRD13CQ8N6S4 541 aa11.9□□□□□ -0.5
C2CD3-219ENST00000542930 CDX2Q99626 313 aaPredicted RBP11.9□□□□□ -0.5
C2CD3-219ENST00000542930 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
C2CD3-219ENST00000542930 PTPRAP18433 802 aa11.89□□□□□ -0.51
C2CD3-219ENST00000542930 TWISTNBQ3B726 338 aaPredicted RBP11.89□□□□□ -0.51
C2CD3-219ENST00000542930 MAFAQ8NHW3 353 aaPredicted RBP11.89□□□□□ -0.51
C2CD3-219ENST00000542930 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
C2CD3-219ENST00000542930 PICK1Q9NRD5 415 aa11.89□□□□□ -0.51
C2CD3-219ENST00000542930 MROH5Q6ZUA9 1318 aa11.88□□□□□ -0.51
C2CD3-219ENST00000542930 PHF20L1A8MW92 1017 aa11.88□□□□□ -0.51
C2CD3-219ENST00000542930 COL6A1P12109 1028 aa11.88□□□□□ -0.51
C2CD3-219ENST00000542930 NFIAQ12857 509 aa11.88□□□□□ -0.51
C2CD3-219ENST00000542930 TRIM32Q13049 653 aa11.88□□□□□ -0.51
C2CD3-219ENST00000542930 CDC42EP5Q6NZY7 148 aa11.88□□□□□ -0.51
C2CD3-219ENST00000542930 TSR2Q969E8 191 aaKnown RBP11.88□□□□□ -0.51
C2CD3-219ENST00000542930 GJD2Q9UKL4 321 aa11.88□□□□□ -0.51
C2CD3-219ENST00000542930 PNMA3Q9UL41 463 aa11.88□□□□□ -0.51
C2CD3-219ENST00000542930 AGTPBP1Q9UPW5 1226 aa11.88□□□□□ -0.51
C2CD3-219ENST00000542930 LRRC26Q2I0M4 334 aa11.87□□□□□ -0.51
C2CD3-219ENST00000542930 BEND3Q5T5X7 828 aa11.87□□□□□ -0.51
C2CD3-219ENST00000542930 MAP3K21Q5TCX8 1036 aa11.87□□□□□ -0.51
C2CD3-219ENST00000542930 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
C2CD3-219ENST00000542930 AK9Q5TCS8 1911 aa11.86□□□□□ -0.51
C2CD3-219ENST00000542930 GRM8O00222 908 aa11.86□□□□□ -0.51
C2CD3-219ENST00000542930 GCLCP48506 637 aaPredicted RBP11.86□□□□□ -0.51
C2CD3-219ENST00000542930 TRIB2Q92519 343 aa11.86□□□□□ -0.51
C2CD3-219ENST00000542930 LBHD1Q9BQE6 289 aaPredicted RBP11.86□□□□□ -0.51
C2CD3-219ENST00000542930 SEMA6BQ9H3T3 888 aa11.86□□□□□ -0.51
C2CD3-219ENST00000542930 DAGLAQ9Y4D2 1042 aa11.86□□□□□ -0.51
C2CD3-219ENST00000542930 ATRNL1Q5VV63 1379 aa11.86□□□□□ -0.51
C2CD3-219ENST00000542930 TRIM75PA6NK02 468 aa11.85□□□□□ -0.51
C2CD3-219ENST00000542930 CTNND1O60716 968 aaKnown RBP11.85□□□□□ -0.51
C2CD3-219ENST00000542930 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
C2CD3-219ENST00000542930 MAP3K10Q02779 954 aa11.85□□□□□ -0.51
C2CD3-219ENST00000542930 TREML2Q5T2D2 321 aa11.85□□□□□ -0.51
C2CD3-219ENST00000542930 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
C2CD3-219ENST00000542930 PROCA1Q8NCQ7 364 aaPredicted RBP11.85□□□□□ -0.51
C2CD3-219ENST00000542930 WDR66Q8TBY9 1149 aa11.85□□□□□ -0.51
C2CD3-219ENST00000542930 KIF16BQ96L93 1317 aa11.85□□□□□ -0.51
C2CD3-219ENST00000542930 TNFRSF10AO00220 468 aa11.84□□□□□ -0.51
C2CD3-219ENST00000542930 PDE8BO95263 885 aa11.84□□□□□ -0.51
C2CD3-219ENST00000542930 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
C2CD3-219ENST00000542930 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
C2CD3-219ENST00000542930 USP40Q9NVE5 1235 aa11.84□□□□□ -0.51
C2CD3-219ENST00000542930 C9orf78Q9NZ63 289 aaPredicted RBP11.84□□□□□ -0.51
C2CD3-219ENST00000542930 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
C2CD3-219ENST00000542930 PTPRFP10586 1907 aa11.84□□□□□ -0.51
C2CD3-219ENST00000542930 F6X3S4 739 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 ENTPD3O75355 529 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 XRCC5P13010 732 aaKnown RBP11.83□□□□□ -0.52
C2CD3-219ENST00000542930 CYP2B6P20813 491 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
C2CD3-219ENST00000542930 PLA2G5P39877 138 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 PABPC4Q13310 644 aaKnown RBP eCLIP11.83□□□□□ -0.52
C2CD3-219ENST00000542930 DIXDC1Q155Q3 683 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 TJAP1Q5JTD0 557 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 LHX8Q68G74 356 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 TRMT44Q8IYL2 757 aaKnown RBP11.83□□□□□ -0.52
C2CD3-219ENST00000542930 VGLL2Q8N8G2 317 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 MYLIPQ8WY64 445 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 IDI2Q9BXS1 227 aa11.83□□□□□ -0.52
C2CD3-219ENST00000542930 FOSL2P15408 326 aa11.82□□□□□ -0.52
C2CD3-219ENST00000542930 RGS3P49796 1198 aa11.82□□□□□ -0.52
C2CD3-219ENST00000542930 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
C2CD3-219ENST00000542930 TTYH1Q9H313 450 aaPredicted RBP11.82□□□□□ -0.52
C2CD3-219ENST00000542930 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
C2CD3-219ENST00000542930 PRDX5P30044 214 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 SMAD3P84022 425 aaKnown RBP11.81□□□□□ -0.52
C2CD3-219ENST00000542930 CACNB2Q08289 660 aaPredicted RBP11.81□□□□□ -0.52
C2CD3-219ENST00000542930 SH3BP5LQ7L8J4 393 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
C2CD3-219ENST00000542930 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
C2CD3-219ENST00000542930 SOCS4Q8WXH5 440 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 KAZALD1Q96I82 304 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 SUCLG2Q96I99 432 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 NUDT12Q9BQG2 462 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 ASCC2Q9H1I8 757 aaPredicted RBP11.81□□□□□ -0.52
C2CD3-219ENST00000542930 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.81□□□□□ -0.52
C2CD3-219ENST00000542930 MORF4L1Q9UBU8 362 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 PRKAG2Q9UGJ0 569 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 RAPGEFL1Q9UHV5 662 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 PHIPQ8WWQ0 1821 aa11.81□□□□□ -0.52
C2CD3-219ENST00000542930 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
C2CD3-219ENST00000542930 LDHBP07195 334 aaKnown RBP11.8□□□□□ -0.52
C2CD3-219ENST00000542930 ZKSCAN1P17029 563 aaPredicted RBP11.8□□□□□ -0.52
C2CD3-219ENST00000542930 FGFR2P21802 821 aa11.8□□□□□ -0.52
C2CD3-219ENST00000542930 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
C2CD3-219ENST00000542930 SHHQ15465 462 aa11.8□□□□□ -0.52
C2CD3-219ENST00000542930 FAM122AQ96E09 287 aa11.8□□□□□ -0.52
C2CD3-219ENST00000542930 SENP6Q9GZR1 1112 aaPredicted RBP11.8□□□□□ -0.52
C2CD3-219ENST00000542930 PLXNB2O15031 1838 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms