RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 ZNF574Q6ZN55 896 aaPredicted RBP7.39□□□□□ -1.23
MDM2-228ENST00000542502 GLIS3Q8NEA6 775 aa7.39□□□□□ -1.23
MDM2-228ENST00000542502 ZC3H12CQ9C0D7 883 aaKnown RBP7.39□□□□□ -1.23
MDM2-228ENST00000542502 KRT82Q9NSB4 513 aa7.39□□□□□ -1.23
MDM2-228ENST00000542502 PAPLNO95428 1278 aa7.38□□□□□ -1.23
MDM2-228ENST00000542502 GSTP1P09211 210 aaKnown RBP7.38□□□□□ -1.23
MDM2-228ENST00000542502 FAM87AP0C7U9 286 aa7.38□□□□□ -1.23
MDM2-228ENST00000542502 HNRNPUQ00839 825 aaKnown RBP eCLIP7.38□□□□□ -1.23
MDM2-228ENST00000542502 ZNF792Q3KQV3 632 aa7.38□□□□□ -1.23
MDM2-228ENST00000542502 SMYD4Q8IYR2 804 aaPredicted RBP7.38□□□□□ -1.23
MDM2-228ENST00000542502 NETO1Q8TDF5 533 aa7.38□□□□□ -1.23
MDM2-228ENST00000542502 TMC1Q8TDI8 760 aa7.38□□□□□ -1.23
MDM2-228ENST00000542502 DISC1Q9NRI5 854 aa7.38□□□□□ -1.23
MDM2-228ENST00000542502 PCDHGC5Q9Y5F6 944 aa7.38□□□□□ -1.23
MDM2-228ENST00000542502 DNMBPQ6XZF7 1577 aa7.37□□□□□ -1.23
MDM2-228ENST00000542502 C8AP07357 584 aa7.37□□□□□ -1.23
MDM2-228ENST00000542502 TXNDC2Q86VQ3 553 aa7.37□□□□□ -1.23
MDM2-228ENST00000542502 PLD6Q8N2A8 252 aaKnown RBP7.37□□□□□ -1.23
MDM2-228ENST00000542502 EPS8L3Q8TE67 593 aaKnown RBP7.37□□□□□ -1.23
MDM2-228ENST00000542502 ALKBH8Q96BT7 664 aaKnown RBP7.37□□□□□ -1.23
MDM2-228ENST00000542502 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
MDM2-228ENST00000542502 CSRNP1Q96S65 589 aa7.37□□□□□ -1.23
MDM2-228ENST00000542502 BIN1O00499 593 aa7.36□□□□□ -1.23
MDM2-228ENST00000542502 JAG1P78504 1218 aa7.36□□□□□ -1.23
MDM2-228ENST00000542502 PPP2R3AQ06190 1150 aa7.36□□□□□ -1.23
MDM2-228ENST00000542502 BNIP3Q12983 259 aa7.36□□□□□ -1.23
MDM2-228ENST00000542502 TTLL4Q14679 1199 aa7.36□□□□□ -1.23
MDM2-228ENST00000542502 FAM181AQ8N9Y4 354 aa7.36□□□□□ -1.23
MDM2-228ENST00000542502 TMEM39AQ9NV64 488 aa7.36□□□□□ -1.23
MDM2-228ENST00000542502 DTHD1Q6ZMT9 781 aa7.35□□□□□ -1.23
MDM2-228ENST00000542502 PDZD3Q86UT5 571 aa7.35□□□□□ -1.23
MDM2-228ENST00000542502 RBCK1Q9BYM8 510 aa7.35□□□□□ -1.23
MDM2-228ENST00000542502 VAV3Q9UKW4 847 aa7.35□□□□□ -1.23
MDM2-228ENST00000542502 URB2Q14146 1524 aaKnown RBP7.35□□□□□ -1.23
MDM2-228ENST00000542502 TOPBP1Q92547 1522 aa7.35□□□□□ -1.23
MDM2-228ENST00000542502 RNGTTO60942 597 aaKnown RBP7.34□□□□□ -1.23
MDM2-228ENST00000542502 CD8BP10966 210 aa7.34□□□□□ -1.23
MDM2-228ENST00000542502 FUT4P22083 530 aa7.34□□□□□ -1.23
MDM2-228ENST00000542502 FCGRTP55899 365 aa7.34□□□□□ -1.23
MDM2-228ENST00000542502 MKNK2Q9HBH9 465 aa7.34□□□□□ -1.23
MDM2-228ENST00000542502 PPP4R2Q9NY27 417 aa7.34□□□□□ -1.23
MDM2-228ENST00000542502 GPN3Q9UHW5 284 aaPredicted RBP7.34□□□□□ -1.23
MDM2-228ENST00000542502 PCOLCE2Q9UKZ9 415 aa7.34□□□□□ -1.23
MDM2-228ENST00000542502 WRNQ14191 1432 aaPredicted RBP eCLIP7.34□□□□□ -1.23
MDM2-228ENST00000542502 XRCC5P13010 732 aaKnown RBP7.33□□□□□ -1.24
MDM2-228ENST00000542502 HCLS1P14317 486 aaPredicted RBP7.33□□□□□ -1.24
MDM2-228ENST00000542502 PRKCQQ04759 706 aa7.33□□□□□ -1.24
MDM2-228ENST00000542502 ATG4DQ86TL0 474 aaPredicted RBP7.33□□□□□ -1.24
MDM2-228ENST00000542502 KCNB2Q92953 911 aa7.33□□□□□ -1.24
MDM2-228ENST00000542502 DUSP23Q9BVJ7 150 aa7.33□□□□□ -1.24
MDM2-228ENST00000542502 NLRP2Q9NX02 1062 aa7.33□□□□□ -1.24
MDM2-228ENST00000542502 U3KQE9 123 aa7.33□□□□□ -1.24
MDM2-228ENST00000542502 WDR97A6NE52 1622 aa7.33□□□□□ -1.24
MDM2-228ENST00000542502 IFT140Q96RY7 1462 aa7.32□□□□□ -1.24
MDM2-228ENST00000542502 TOP2BQ02880 1626 aa7.32□□□□□ -1.24
MDM2-228ENST00000542502 LEFTY1O75610 366 aa7.32□□□□□ -1.24
MDM2-228ENST00000542502 IFI16Q16666 785 aaKnown RBP7.32□□□□□ -1.24
MDM2-228ENST00000542502 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.32□□□□□ -1.24
MDM2-228ENST00000542502 CARMIL2Q6F5E8 1435 aa7.32□□□□□ -1.24
MDM2-228ENST00000542502 BIVM-ERCC5R4GMW8 1640 aa7.31□□□□□ -1.24
MDM2-228ENST00000542502 NEFMP07197 916 aa7.31□□□□□ -1.24
MDM2-228ENST00000542502 OXCT1P55809 520 aa7.31□□□□□ -1.24
MDM2-228ENST00000542502 ZC3H12AQ5D1E8 599 aaKnown RBP7.31□□□□□ -1.24
MDM2-228ENST00000542502 LCE1DQ5T752 114 aa7.31□□□□□ -1.24
MDM2-228ENST00000542502 PI16Q6UXB8 463 aa7.31□□□□□ -1.24
MDM2-228ENST00000542502 SULF2Q8IWU5 870 aa7.31□□□□□ -1.24
MDM2-228ENST00000542502 ISL2Q96A47 359 aa7.31□□□□□ -1.24
MDM2-228ENST00000542502 BCO2Q9BYV7 579 aa7.31□□□□□ -1.24
MDM2-228ENST00000542502 RC3H2Q9HBD1 1191 aaKnown RBP7.31□□□□□ -1.24
MDM2-228ENST00000542502 MBNL3Q9NUK0 354 aaKnown RBP7.31□□□□□ -1.24
MDM2-228ENST00000542502 ADAMTS6Q9UKP5 1117 aa7.31□□□□□ -1.24
MDM2-228ENST00000542502 CEACAM5P06731 702 aa7.3□□□□□ -1.24
MDM2-228ENST00000542502 RNASE1P07998 156 aaKnown RBP7.3□□□□□ -1.24
MDM2-228ENST00000542502 ARNTP27540 789 aa7.3□□□□□ -1.24
MDM2-228ENST00000542502 ERVK-24P63145 666 aa7.3□□□□□ -1.24
MDM2-228ENST00000542502 ARHGAP27Q6ZUM4 889 aa7.3□□□□□ -1.24
MDM2-228ENST00000542502 RNF214Q8ND24 703 aa7.3□□□□□ -1.24
MDM2-228ENST00000542502 CCER1Q8TC90 406 aaPredicted RBP7.3□□□□□ -1.24
MDM2-228ENST00000542502 STK35Q8TDR2 534 aa7.3□□□□□ -1.24
MDM2-228ENST00000542502 HRASLS5Q96KN8 279 aa7.3□□□□□ -1.24
MDM2-228ENST00000542502 SSU72Q9NP77 194 aaKnown RBP7.3□□□□□ -1.24
MDM2-228ENST00000542502 CUX1P39880 1505 aa7.3□□□□□ -1.24
MDM2-228ENST00000542502 SOGA1O94964 1423 aa7.29□□□□□ -1.24
MDM2-228ENST00000542502 TMEM265A0A087WTH1 108 aa7.29□□□□□ -1.24
MDM2-228ENST00000542502 CD96P40200 585 aa7.29□□□□□ -1.24
MDM2-228ENST00000542502 AOC3Q16853 763 aa7.29□□□□□ -1.24
MDM2-228ENST00000542502 ZNF648Q5T619 568 aaPredicted RBP7.29□□□□□ -1.24
MDM2-228ENST00000542502 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
MDM2-228ENST00000542502 PI4K2BQ8TCG2 481 aa7.29□□□□□ -1.24
MDM2-228ENST00000542502 PLAGL2Q9UPG8 496 aa7.29□□□□□ -1.24
MDM2-228ENST00000542502 POLA1P09884 1462 aaPredicted RBP7.29□□□□□ -1.24
MDM2-228ENST00000542502 NME2P22392 152 aa7.28□□□□□ -1.24
MDM2-228ENST00000542502 MAP1SQ66K74 1059 aaPredicted RBP7.28□□□□□ -1.24
MDM2-228ENST00000542502 TMC7Q7Z402 723 aa7.28□□□□□ -1.24
MDM2-228ENST00000542502 TOP6BLQ8N6T0 577 aa7.28□□□□□ -1.24
MDM2-228ENST00000542502 LRRN4CLQ8ND94 238 aa7.28□□□□□ -1.24
MDM2-228ENST00000542502 FAM168AQ92567 244 aa7.28□□□□□ -1.24
MDM2-228ENST00000542502 EMILIN2Q9BXX0 1053 aa7.28□□□□□ -1.24
MDM2-228ENST00000542502 AKAP2Q9Y2D5 859 aa7.28□□□□□ -1.24
MDM2-228ENST00000542502 FGD5Q6ZNL6 1462 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms