RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 CYP2C8P10632 490 aa19.15■□□□□ 0.66
RTN3-211ENST00000542238 BCRP11274 1271 aa19.15■□□□□ 0.66
RTN3-211ENST00000542238 SPTY2D1Q68D10 685 aaPredicted RBP19.15■□□□□ 0.66
RTN3-211ENST00000542238 GPAT2Q6NUI2 795 aa19.15■□□□□ 0.66
RTN3-211ENST00000542238 API5Q9BZZ5 524 aaKnown RBP19.15■□□□□ 0.66
RTN3-211ENST00000542238 RNF208Q9H0X6 261 aa19.15■□□□□ 0.66
RTN3-211ENST00000542238 ABCF2Q9UG63 623 aa19.15■□□□□ 0.66
RTN3-211ENST00000542238 NOB1Q9ULX3 412 aaKnown RBP19.15■□□□□ 0.66
RTN3-211ENST00000542238 A0A0G2JLL6 359 aaPredicted RBP19.14■□□□□ 0.65
RTN3-211ENST00000542238 GJB1P08034 283 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 CT47B1P0C2W7 299 aaPredicted RBP19.14■□□□□ 0.65
RTN3-211ENST00000542238 CCL5P13501 91 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 PTPRAP18433 802 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 GJA8P48165 433 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 PRKCZQ05513 592 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 GADL1Q6ZQY3 521 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 PRRT2Q7Z6L0 340 aaPredicted RBP19.14■□□□□ 0.65
RTN3-211ENST00000542238 SLAIN1Q8ND83 568 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 SHISA4Q96DD7 197 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 HTATIP2Q9BUP3 242 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 COPRSQ9NQ92 184 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 PA2G4Q9UQ80 394 aaKnown RBP19.14■□□□□ 0.65
RTN3-211ENST00000542238 GAKO14976 1311 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 DOCK1Q14185 1865 aa19.14■□□□□ 0.65
RTN3-211ENST00000542238 CTNND1O60716 968 aaKnown RBP19.13■□□□□ 0.65
RTN3-211ENST00000542238 ADORA1P30542 326 aa19.13■□□□□ 0.65
RTN3-211ENST00000542238 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
RTN3-211ENST00000542238 SLC45A1Q9Y2W3 748 aa19.13■□□□□ 0.65
RTN3-211ENST00000542238 AFG3L2Q9Y4W6 797 aa19.13■□□□□ 0.65
RTN3-211ENST00000542238 PDS5AQ29RF7 1337 aaKnown RBP19.13■□□□□ 0.65
RTN3-211ENST00000542238 ATRNL1Q5VV63 1379 aa19.13■□□□□ 0.65
RTN3-211ENST00000542238 PTPRFP10586 1907 aa19.13■□□□□ 0.65
RTN3-211ENST00000542238 PICALMQ13492 652 aa19.12■□□□□ 0.65
RTN3-211ENST00000542238 RASGRF1Q13972 1273 aa19.12■□□□□ 0.65
RTN3-211ENST00000542238 FAM163AQ96GL9 167 aaPredicted RBP19.12■□□□□ 0.65
RTN3-211ENST00000542238 AKAP2Q9Y2D5 859 aa19.12■□□□□ 0.65
RTN3-211ENST00000542238 BTDP43251 543 aa19.11■□□□□ 0.65
RTN3-211ENST00000542238 TIMM10P62072 90 aa19.11■□□□□ 0.65
RTN3-211ENST00000542238 MAP3K10Q02779 954 aa19.11■□□□□ 0.65
RTN3-211ENST00000542238 SH3BP5LQ7L8J4 393 aa19.11■□□□□ 0.65
RTN3-211ENST00000542238 SMCR8Q8TEV9 937 aaPredicted RBP19.11■□□□□ 0.65
RTN3-211ENST00000542238 PHIPQ8WWQ0 1821 aa19.11■□□□□ 0.65
RTN3-211ENST00000542238 RFX7Q2KHR2 1363 aa19.1■□□□□ 0.65
RTN3-211ENST00000542238 MROH7-TTC4A0A0A0MT08 1334 aa19.1■□□□□ 0.65
RTN3-211ENST00000542238 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
RTN3-211ENST00000542238 ADCY3O60266 1144 aa19.1■□□□□ 0.65
RTN3-211ENST00000542238 MVPQ14764 893 aaKnown RBP19.1■□□□□ 0.65
RTN3-211ENST00000542238 CHRDL2Q6WN34 429 aa19.1■□□□□ 0.65
RTN3-211ENST00000542238 ERICH6Q7L0X2 663 aa19.1■□□□□ 0.65
RTN3-211ENST00000542238 GABRQQ9UN88 632 aa19.1■□□□□ 0.65
RTN3-211ENST00000542238 A0A1B0GUL7 405 aa19.09■□□□□ 0.65
RTN3-211ENST00000542238 TRIM75PA6NK02 468 aa19.09■□□□□ 0.65
RTN3-211ENST00000542238 TNPO2O14787 897 aaKnown RBP19.09■□□□□ 0.65
RTN3-211ENST00000542238 TRMT2AQ8IZ69 625 aaKnown RBP19.09■□□□□ 0.65
RTN3-211ENST00000542238 U2AF1L4Q8WU68 220 aaKnown RBP19.09■□□□□ 0.65
RTN3-211ENST00000542238 XAGE2Q96GT9 111 aa19.09■□□□□ 0.65
RTN3-211ENST00000542238 MEIS3Q99687 375 aa19.09■□□□□ 0.65
RTN3-211ENST00000542238 DDX4Q9NQI0 724 aaKnown RBP19.09■□□□□ 0.65
RTN3-211ENST00000542238 NR2E3Q9Y5X4 410 aa19.09■□□□□ 0.65
RTN3-211ENST00000542238 SRGAP3O43295 1099 aa19.08■□□□□ 0.64
RTN3-211ENST00000542238 GNAI3P08754 354 aa19.08■□□□□ 0.64
RTN3-211ENST00000542238 FLT3LGP49771 235 aa19.08■□□□□ 0.64
RTN3-211ENST00000542238 UNC93B1Q9H1C4 597 aa19.08■□□□□ 0.64
RTN3-211ENST00000542238 PNMA3Q9UL41 463 aa19.08■□□□□ 0.64
RTN3-211ENST00000542238 GPR75-ASB3A0A0A6YYF3 556 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 TBC1D12O60347 775 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 FARP2O94887 1054 aaPredicted RBP19.07■□□□□ 0.64
RTN3-211ENST00000542238 SGPL1O95470 568 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 LDHCP07864 332 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 CAPN2P17655 700 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 GSTO1P78417 241 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 MECOMQ03112 1051 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 TFCP2Q12800 502 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 GORABQ5T7V8 394 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 UBE2Q1Q7Z7E8 422 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 PXYLP1Q8TE99 480 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 NEUROD6Q96NK8 337 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.07■□□□□ 0.64
RTN3-211ENST00000542238 AGTPBP1Q9UPW5 1226 aa19.07■□□□□ 0.64
RTN3-211ENST00000542238 NPM3O75607 178 aaKnown RBP19.06■□□□□ 0.64
RTN3-211ENST00000542238 MAP4K4O95819 1239 aaPredicted RBP19.06■□□□□ 0.64
RTN3-211ENST00000542238 IRF5Q13568 498 aa19.06■□□□□ 0.64
RTN3-211ENST00000542238 COA7Q96BR5 231 aa19.06■□□□□ 0.64
RTN3-211ENST00000542238 DOCK3Q8IZD9 2030 aa19.06■□□□□ 0.64
RTN3-211ENST00000542238 ATAD5Q96QE3 1844 aa19.05■□□□□ 0.64
RTN3-211ENST00000542238 TFRCP02786 760 aaKnown RBP19.05■□□□□ 0.64
RTN3-211ENST00000542238 INHAP05111 366 aa19.05■□□□□ 0.64
RTN3-211ENST00000542238 SLURP2P0DP57 97 aa19.05■□□□□ 0.64
RTN3-211ENST00000542238 ELNP15502 786 aa19.05■□□□□ 0.64
RTN3-211ENST00000542238 RHBDL3P58872 404 aa19.05■□□□□ 0.64
RTN3-211ENST00000542238 ANKRD13CQ8N6S4 541 aa19.05■□□□□ 0.64
RTN3-211ENST00000542238 PROCA1Q8NCQ7 364 aaPredicted RBP19.05■□□□□ 0.64
RTN3-211ENST00000542238 ARHGAP45Q92619 1136 aa19.05■□□□□ 0.64
RTN3-211ENST00000542238 OSBPL5Q9H0X9 879 aaPredicted RBP19.05■□□□□ 0.64
RTN3-211ENST00000542238 RBM27Q9P2N5 1060 aaKnown RBP19.05■□□□□ 0.64
RTN3-211ENST00000542238 TAOK2Q9UL54 1235 aa19.05■□□□□ 0.64
RTN3-211ENST00000542238 MTX1Q13505 466 aa19.04■□□□□ 0.64
RTN3-211ENST00000542238 SPATA5Q8NB90 893 aa19.04■□□□□ 0.64
RTN3-211ENST00000542238 TBC1D2Q9BYX2 928 aa19.04■□□□□ 0.64
RTN3-211ENST00000542238 HMG20BQ9P0W2 317 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms