RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 SOX1O00570 391 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 ADCY3O60266 1144 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 SGPL1O95470 568 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 ELNP15502 786 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 MTX1Q13505 466 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 C20orf194Q5TEA3 1177 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 GADL1Q6ZQY3 521 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 UBE2Q1Q7Z7E8 422 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 DEFB118Q96PH6 123 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 STAP2Q9UGK3 403 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 LRRFIP2Q9Y608 721 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 ADGRA2Q96PE1 1338 aa10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 RPAP1Q9BWH6 1393 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-212ENST00000541770 PDE8BO95263 885 aa10.76□□□□□ -0.69
CLSTN3-212ENST00000541770 INHAP05111 366 aa10.76□□□□□ -0.69
CLSTN3-212ENST00000541770 FKBP1CQ5VVH2 108 aa10.76□□□□□ -0.69
CLSTN3-212ENST00000541770 HHIPL2Q6UWX4 724 aa10.76□□□□□ -0.69
CLSTN3-212ENST00000541770 KLHDC4Q8TBB5 520 aa10.76□□□□□ -0.69
CLSTN3-212ENST00000541770 FAM151AQ8WW52 585 aa10.76□□□□□ -0.69
CLSTN3-212ENST00000541770 PRO3102Q9H379 93 aa10.76□□□□□ -0.69
CLSTN3-212ENST00000541770 KCNH4Q9UQ05 1017 aa10.76□□□□□ -0.69
CLSTN3-212ENST00000541770 TNPO2O14787 897 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 IFIT1P09914 478 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 BCRP11274 1271 aa10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 FLT3LGP49771 235 aa10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 GPAT2Q6NUI2 795 aa10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 CDC42EP5Q6NZY7 148 aa10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 SMCR8Q8TEV9 937 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 MRIQ9BWK5 157 aa10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 ZBTB40Q9NUA8 1239 aa10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 USP40Q9NVE5 1235 aa10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 SUPT16HQ9Y5B9 1047 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 ZHX2Q9Y6X8 837 aa10.75□□□□□ -0.69
CLSTN3-212ENST00000541770 DOCK1Q14185 1865 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 PTPRFP10586 1907 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 MYH2Q9UKX2 1941 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 A0A1W2PPC1 479 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 RFX5P48382 616 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 NFIAQ12857 509 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 MOGSQ13724 837 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 DIXDC1Q155Q3 683 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 FASTKD5Q7L8L6 764 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 ZSCAN29Q8IWY8 852 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 C7orf61Q8IZ16 206 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 WDR66Q8TBY9 1149 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 PAWRQ96IZ0 340 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 PICK1Q9NRD5 415 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 ZNF112Q9UJU3 913 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 SUGT1Q9Y2Z0 365 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 DAGLAQ9Y4D2 1042 aa10.74□□□□□ -0.69
CLSTN3-212ENST00000541770 CEP290O15078 2479 aa10.73□□□□□ -0.69
CLSTN3-212ENST00000541770 CXCL11O14625 94 aa10.73□□□□□ -0.69
CLSTN3-212ENST00000541770 SLC5A1P13866 664 aa10.73□□□□□ -0.69
CLSTN3-212ENST00000541770 ATP8B2P98198 1209 aa10.73□□□□□ -0.69
CLSTN3-212ENST00000541770 PUM3Q15397 648 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-212ENST00000541770 NOL9Q5SY16 702 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-212ENST00000541770 SCYL3Q8IZE3 742 aa10.73□□□□□ -0.69
CLSTN3-212ENST00000541770 VGLL2Q8N8G2 317 aa10.73□□□□□ -0.69
CLSTN3-212ENST00000541770 ZMYND8Q9ULU4 1186 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-212ENST00000541770 SZT2Q5T011 3432 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 PHIPQ8WWQ0 1821 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 DOCK3Q8IZD9 2030 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 SRGAP3O43295 1099 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 LDHBP07195 334 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 PRDX5P30044 214 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 AAMPQ13685 434 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 NECAB2Q7Z6G3 386 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 ZFPM1Q8IX07 1006 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 RPAP2Q8IXW5 612 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 ANKRD13CQ8N6S4 541 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 SSH3Q8TE77 659 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 PXYLP1Q8TE99 480 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 DIS3LQ8TF46 1054 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 COA7Q96BR5 231 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 COPRSQ9NQ92 184 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 FAM198AQ9UFP1 575 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 ATAD5Q96QE3 1844 aa10.72□□□□□ -0.69
CLSTN3-212ENST00000541770 A0A0G2JLL6 359 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 PNMA6EA0A0J9YXQ4 647 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 TRIM75PA6NK02 468 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 CIAO1O76071 339 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 SYN1P17600 705 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 PTPRAP18433 802 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 RGS3P49796 1198 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 POLA2Q14181 598 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 CEP85Q6P2H3 762 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 Q7L0L9 218 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 PRRT2Q7Z6L0 340 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 CCDC84Q86UT8 332 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 DEFB123Q8N688 67 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 C1orf115Q9H7X2 142 aa10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-212ENST00000541770 EYA2O00167 538 aa10.7□□□□□ -0.7
CLSTN3-212ENST00000541770 CENPBP07199 599 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-212ENST00000541770 SLURP2P0DP57 97 aa10.7□□□□□ -0.7
CLSTN3-212ENST00000541770 FGFR2P21802 821 aa10.7□□□□□ -0.7
CLSTN3-212ENST00000541770 MNX1P50219 401 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms