RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 PRPF40AO75400 957 aaKnown RBP8□□□□□ -1.13
EPHA4-214ENST00000541600 SASH1O94885 1247 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 IGKV5-2P06315 115 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 SNRPA1P09661 255 aaKnown RBP8□□□□□ -1.13
EPHA4-214ENST00000541600 G3BP1Q13283 466 aaKnown RBP eCLIP8□□□□□ -1.13
EPHA4-214ENST00000541600 PKP1Q13835 747 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 GCKRQ14397 625 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 PROSER3Q2NL68 480 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 TSHZ3Q63HK5 1081 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 MSL1Q68DK7 614 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 LRSAM1Q6UWE0 723 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 SMIM5Q71RC9 77 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 COL23A1Q86Y22 540 aaPredicted RBP8□□□□□ -1.13
EPHA4-214ENST00000541600 FAM160A2Q8N612 972 aaPredicted RBP8□□□□□ -1.13
EPHA4-214ENST00000541600 SYAP1Q96A49 352 aaPredicted RBP8□□□□□ -1.13
EPHA4-214ENST00000541600 IL25Q9H293 177 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 SEPT3Q9UH03 358 aa8□□□□□ -1.13
EPHA4-214ENST00000541600 ZSCAN21Q9Y5A6 473 aaPredicted RBP8□□□□□ -1.13
EPHA4-214ENST00000541600 DNMT3AQ9Y6K1 912 aaPredicted RBP8□□□□□ -1.13
EPHA4-214ENST00000541600 LAMB4A4D0S4 1761 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 RPAP1Q9BWH6 1393 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-214ENST00000541600 C5P01031 1676 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 TK2O00142 265 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 LETM1O95202 739 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-214ENST00000541600 IFIT2P09913 472 aaKnown RBP7.99□□□□□ -1.13
EPHA4-214ENST00000541600 ATP5JP18859 108 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 WEE1P30291 646 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 MCM5P33992 734 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 RFX5P48382 616 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-214ENST00000541600 NASPP49321 788 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-214ENST00000541600 PPP4CP60510 307 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 NEXNQ0ZGT2 675 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 UVSSAQ2YD98 709 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 USPL1Q5W0Q7 1092 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
EPHA4-214ENST00000541600 SUCLG2Q96I99 432 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 GPR108Q9NPR9 543 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 DIAPH3Q9NSV4 1193 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 HMG20BQ9P0W2 317 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 ATP6V1DQ9Y5K8 247 aa7.99□□□□□ -1.13
EPHA4-214ENST00000541600 ZSCAN22P10073 491 aaPredicted RBP7.98□□□□□ -1.13
EPHA4-214ENST00000541600 PSMA5P28066 241 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 TERF1P54274 439 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 CASP7P55210 303 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 RNF20Q5VTR2 975 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 ANKRD13DQ6ZTN6 518 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 RUFY3Q7L099 469 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 SH3RF1Q7Z6J0 888 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 AMIGO3Q86WK7 504 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 RGL4Q8IZJ4 473 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 EAF2Q96CJ1 260 aaPredicted RBP7.98□□□□□ -1.13
EPHA4-214ENST00000541600 ABHD8Q96I13 439 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 FMNL2Q96PY5 1086 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 HINFPQ9BQA5 517 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 ATG3Q9NT62 314 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 CD2APQ9Y5K6 639 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 CCDC171Q6TFL3 1326 aa7.98□□□□□ -1.13
EPHA4-214ENST00000541600 MED23Q9ULK4 1368 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 UBR2Q8IWV8 1755 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 ERVV-2B6SEH9 535 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 H7C1W4 665 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 PTCD1O75127 700 aaKnown RBP7.97□□□□□ -1.13
EPHA4-214ENST00000541600 ANXA1P04083 346 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 ZKSCAN1P17029 563 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-214ENST00000541600 AK2P54819 239 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 FSTL1Q12841 308 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 USP4Q13107 963 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 OS9Q13438 667 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-214ENST00000541600 ANKRD1Q15327 319 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 CWF19L2Q2TBE0 894 aaKnown RBP7.97□□□□□ -1.13
EPHA4-214ENST00000541600 EAPPQ56P03 285 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-214ENST00000541600 LHX8Q68G74 356 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 CAVIN1Q6NZI2 390 aaKnown RBP7.97□□□□□ -1.13
EPHA4-214ENST00000541600 AACSQ86V21 672 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 ZSCAN30Q86W11 494 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 FAM184AQ8NB25 1140 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 PLBD2Q8NHP8 589 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 SPSB2Q99619 263 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 MKNK1Q9BUB5 465 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 UNC93B1Q9H1C4 597 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 BICC1Q9H694 974 aaKnown RBP7.97□□□□□ -1.13
EPHA4-214ENST00000541600 TMEM63CQ9P1W3 806 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 CYP46A1Q9Y6A2 500 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 MEGF6O75095 1541 aa7.97□□□□□ -1.13
EPHA4-214ENST00000541600 TCHHQ07283 1943 aa7.96□□□□□ -1.13
EPHA4-214ENST00000541600 QSER1Q2KHR3 1735 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 M0R2N6 131 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 CYP27B1O15528 508 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 STX6O43752 255 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 LGR5O75473 907 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 NCLP19338 710 aaKnown RBP7.96□□□□□ -1.14
EPHA4-214ENST00000541600 MLLT1Q03111 559 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-214ENST00000541600 PTH1RQ03431 593 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 MTMR3Q13615 1198 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 KRT32Q14532 448 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 TSNAXIP1Q2TAA8 658 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 CREB3L3Q68CJ9 461 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 CWC27Q6UX04 472 aaKnown RBP7.96□□□□□ -1.14
EPHA4-214ENST00000541600 CAPN12Q6ZSI9 719 aa7.96□□□□□ -1.14
EPHA4-214ENST00000541600 COPS6Q7L5N1 327 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms