RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 U2AF1L4Q8WU68 220 aaKnown RBP15.25■□□□□ 0.03
SNHG1-216ENST00000541416 IDI2Q9BXS1 227 aa15.25■□□□□ 0.03
SNHG1-216ENST00000541416 RBM27Q9P2N5 1060 aaKnown RBP15.25■□□□□ 0.03
SNHG1-216ENST00000541416 RANBP2P49792 3224 aaKnown RBP15.25■□□□□ 0.03
SNHG1-216ENST00000541416 TRIOBPQ9H2D6 2365 aa15.25■□□□□ 0.03
SNHG1-216ENST00000541416 MGAMO43451 1857 aa15.25■□□□□ 0.03
SNHG1-216ENST00000541416 TNPO2O14787 897 aaKnown RBP15.24■□□□□ 0.03
SNHG1-216ENST00000541416 ADCY3O60266 1144 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 SGPL1O95470 568 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 PTPRAP18433 802 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 IL15P40933 162 aaPredicted RBP15.24■□□□□ 0.03
SNHG1-216ENST00000541416 RFX5P48382 616 aaPredicted RBP15.24■□□□□ 0.03
SNHG1-216ENST00000541416 RGS3P49796 1198 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 SPTY2D1Q68D10 685 aaPredicted RBP15.24■□□□□ 0.03
SNHG1-216ENST00000541416 ATG9AQ7Z3C6 839 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 UBE2Q1Q7Z7E8 422 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 COA7Q96BR5 231 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 SIL1Q9H173 461 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 PNMA3Q9UL41 463 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 DOCK2Q92608 1830 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 SZT2Q5T011 3432 aa15.24■□□□□ 0.03
SNHG1-216ENST00000541416 A0A1W2PPC1 479 aa15.23■□□□□ 0.03
SNHG1-216ENST00000541416 EVI5O60447 810 aa15.23■□□□□ 0.03
SNHG1-216ENST00000541416 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
SNHG1-216ENST00000541416 TFRCP02786 760 aaKnown RBP15.23■□□□□ 0.03
SNHG1-216ENST00000541416 IRF5Q13568 498 aa15.23■□□□□ 0.03
SNHG1-216ENST00000541416 ALDH1L2Q3SY69 923 aa15.23■□□□□ 0.03
SNHG1-216ENST00000541416 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
SNHG1-216ENST00000541416 AFG3L2Q9Y4W6 797 aa15.23■□□□□ 0.03
SNHG1-216ENST00000541416 ZNF521Q96K83 1311 aa15.22■□□□□ 0.03
SNHG1-216ENST00000541416 MYH2Q9UKX2 1941 aa15.22■□□□□ 0.03
SNHG1-216ENST00000541416 PHF20L1A8MW92 1017 aa15.22■□□□□ 0.03
SNHG1-216ENST00000541416 ZBTB22O15209 634 aa15.22■□□□□ 0.03
SNHG1-216ENST00000541416 FLT3LGP49771 235 aa15.22■□□□□ 0.03
SNHG1-216ENST00000541416 UNC93B1Q9H1C4 597 aa15.22■□□□□ 0.03
SNHG1-216ENST00000541416 GAKO14976 1311 aa15.21■□□□□ 0.03
SNHG1-216ENST00000541416 ZBTB7BO15156 539 aaPredicted RBP15.21■□□□□ 0.03
SNHG1-216ENST00000541416 INHAP05111 366 aa15.21■□□□□ 0.03
SNHG1-216ENST00000541416 PHKA1P46020 1223 aa15.21■□□□□ 0.03
SNHG1-216ENST00000541416 MAP3K10Q02779 954 aa15.21■□□□□ 0.03
SNHG1-216ENST00000541416 PABPC4Q13310 644 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNHG1-216ENST00000541416 ZFPM1Q8IX07 1006 aa15.21■□□□□ 0.03
SNHG1-216ENST00000541416 TBC1D2Q9BYX2 928 aa15.21■□□□□ 0.03
SNHG1-216ENST00000541416 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
SNHG1-216ENST00000541416 ABCF2Q9UG63 623 aa15.21■□□□□ 0.03
SNHG1-216ENST00000541416 GABRQQ9UN88 632 aa15.21■□□□□ 0.03
SNHG1-216ENST00000541416 PDS5AQ29RF7 1337 aaKnown RBP15.2■□□□□ 0.02
SNHG1-216ENST00000541416 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
SNHG1-216ENST00000541416 CCDC102BQ68D86 513 aa15.2■□□□□ 0.02
SNHG1-216ENST00000541416 FAM163AQ96GL9 167 aaPredicted RBP15.2■□□□□ 0.02
SNHG1-216ENST00000541416 DEFB118Q96PH6 123 aa15.2■□□□□ 0.02
SNHG1-216ENST00000541416 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
SNHG1-216ENST00000541416 AGTPBP1Q9UPW5 1226 aa15.2■□□□□ 0.02
SNHG1-216ENST00000541416 AKAP2Q9Y2D5 859 aa15.2■□□□□ 0.02
SNHG1-216ENST00000541416 ATRNL1Q5VV63 1379 aa15.2■□□□□ 0.02
SNHG1-216ENST00000541416 DOCK1Q14185 1865 aa15.19■□□□□ 0.02
SNHG1-216ENST00000541416 MAP4K4O95819 1239 aaPredicted RBP15.19■□□□□ 0.02
SNHG1-216ENST00000541416 ELNP15502 786 aa15.19■□□□□ 0.02
SNHG1-216ENST00000541416 BTDP43251 543 aa15.19■□□□□ 0.02
SNHG1-216ENST00000541416 PICALMQ13492 652 aa15.19■□□□□ 0.02
SNHG1-216ENST00000541416 FAM110CQ1W6H9 321 aa15.19■□□□□ 0.02
SNHG1-216ENST00000541416 NECAB2Q7Z6G3 386 aa15.19■□□□□ 0.02
SNHG1-216ENST00000541416 PROCA1Q8NCQ7 364 aaPredicted RBP15.19■□□□□ 0.02
SNHG1-216ENST00000541416 TBC1D12O60347 775 aa15.18■□□□□ 0.02
SNHG1-216ENST00000541416 LDHCP07864 332 aa15.18■□□□□ 0.02
SNHG1-216ENST00000541416 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
SNHG1-216ENST00000541416 GSTO1P78417 241 aa15.18■□□□□ 0.02
SNHG1-216ENST00000541416 MVPQ14764 893 aaKnown RBP15.18■□□□□ 0.02
SNHG1-216ENST00000541416 ERICH6Q7L0X2 663 aa15.18■□□□□ 0.02
SNHG1-216ENST00000541416 ANKRD13CQ8N6S4 541 aa15.18■□□□□ 0.02
SNHG1-216ENST00000541416 OSBPL5Q9H0X9 879 aaPredicted RBP15.18■□□□□ 0.02
SNHG1-216ENST00000541416 PRO3102Q9H379 93 aa15.18■□□□□ 0.02
SNHG1-216ENST00000541416 COPRSQ9NQ92 184 aa15.18■□□□□ 0.02
SNHG1-216ENST00000541416 PAK6Q9NQU5 681 aaPredicted RBP15.18■□□□□ 0.02
SNHG1-216ENST00000541416 MROH7-TTC4A0A0A0MT08 1334 aa15.17■□□□□ 0.02
SNHG1-216ENST00000541416 RFX7Q2KHR2 1363 aa15.17■□□□□ 0.02
SNHG1-216ENST00000541416 DDTLA6NHG4 134 aaPredicted RBP15.17■□□□□ 0.02
SNHG1-216ENST00000541416 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
SNHG1-216ENST00000541416 RASGRF1Q13972 1273 aa15.17■□□□□ 0.02
SNHG1-216ENST00000541416 ANKLE1Q8NAG6 615 aa15.17■□□□□ 0.02
SNHG1-216ENST00000541416 API5Q9BZZ5 524 aaKnown RBP15.17■□□□□ 0.02
SNHG1-216ENST00000541416 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
SNHG1-216ENST00000541416 PTPRFP10586 1907 aa15.17■□□□□ 0.02
SNHG1-216ENST00000541416 CT47B1P0C2W7 299 aaPredicted RBP15.16■□□□□ 0.02
SNHG1-216ENST00000541416 SH3BP5LQ7L8J4 393 aa15.16■□□□□ 0.02
SNHG1-216ENST00000541416 ZNF280CQ8ND82 737 aa15.16■□□□□ 0.02
SNHG1-216ENST00000541416 SLC17A8Q8NDX2 589 aa15.16■□□□□ 0.02
SNHG1-216ENST00000541416 NOL10Q9BSC4 688 aaKnown RBP15.16■□□□□ 0.02
SNHG1-216ENST00000541416 CRISPLD2Q9H0B8 497 aa15.16■□□□□ 0.02
SNHG1-216ENST00000541416 AS3MTQ9HBK9 375 aa15.16■□□□□ 0.02
SNHG1-216ENST00000541416 COL6A3P12111 3177 aa15.16■□□□□ 0.02
SNHG1-216ENST00000541416 GPR75-ASB3A0A0A6YYF3 556 aa15.15■□□□□ 0.02
SNHG1-216ENST00000541416 ZNF316A6NFI3 1004 aaPredicted RBP15.15■□□□□ 0.02
SNHG1-216ENST00000541416 HMGCRP04035 888 aa15.15■□□□□ 0.02
SNHG1-216ENST00000541416 ADORA1P30542 326 aa15.15■□□□□ 0.02
SNHG1-216ENST00000541416 TIMM10P62072 90 aa15.15■□□□□ 0.02
SNHG1-216ENST00000541416 SLFN5Q08AF3 891 aa15.15■□□□□ 0.02
SNHG1-216ENST00000541416 GORABQ5T7V8 394 aa15.15■□□□□ 0.02
SNHG1-216ENST00000541416 PAWRQ96IZ0 340 aaKnown RBP15.15■□□□□ 0.02
SNHG1-216ENST00000541416 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.15■□□□□ 0.021e-6■□□□□ 8.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms