RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 R3HDMLQ9H3Y0 253 aa17.38■□□□□ 0.37
LTBR-209ENST00000541102 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
LTBR-209ENST00000541102 IGF2BP3O00425 579 aaKnown RBP eCLIP17.37■□□□□ 0.37
LTBR-209ENST00000541102 WDHD1O75717 1129 aaPredicted RBP17.37■□□□□ 0.37
LTBR-209ENST00000541102 ALDH1A1P00352 501 aa17.37■□□□□ 0.37
LTBR-209ENST00000541102 CYP2E1P05181 493 aaPredicted RBP17.37■□□□□ 0.37
LTBR-209ENST00000541102 INPP5BP32019 993 aa17.37■□□□□ 0.37
LTBR-209ENST00000541102 DDX4Q9NQI0 724 aaKnown RBP17.37■□□□□ 0.37
LTBR-209ENST00000541102 PIH1D3Q9NQM4 214 aaKnown RBP17.37■□□□□ 0.37
LTBR-209ENST00000541102 SNCAIPQ9Y6H5 919 aa17.37■□□□□ 0.37
LTBR-209ENST00000541102 GPR25O00155 361 aa17.36■□□□□ 0.37
LTBR-209ENST00000541102 RHBDL3P58872 404 aa17.36■□□□□ 0.37
LTBR-209ENST00000541102 OTUD7BQ6GQQ9 843 aa17.36■□□□□ 0.37
LTBR-209ENST00000541102 NAA16Q6N069 864 aaPredicted RBP17.36■□□□□ 0.37
LTBR-209ENST00000541102 SH3BP5LQ7L8J4 393 aa17.36■□□□□ 0.37
LTBR-209ENST00000541102 ERO1BQ86YB8 467 aa17.36■□□□□ 0.37
LTBR-209ENST00000541102 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
LTBR-209ENST00000541102 NOL10Q9BSC4 688 aaKnown RBP17.36■□□□□ 0.37
LTBR-209ENST00000541102 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
LTBR-209ENST00000541102 OTOFQ9HC10 1997 aa17.36■□□□□ 0.37
LTBR-209ENST00000541102 CCL15-CCL14A0A0B4J2E2 113 aa17.35■□□□□ 0.37
LTBR-209ENST00000541102 SPDYE5A6NIY4 337 aa17.35■□□□□ 0.37
LTBR-209ENST00000541102 CCDC85CA6NKD9 419 aa17.35■□□□□ 0.37
LTBR-209ENST00000541102 RAB11FIP3O75154 756 aa17.35■□□□□ 0.37
LTBR-209ENST00000541102 GTF2A2P52657 109 aa17.35■□□□□ 0.37
LTBR-209ENST00000541102 CCL15Q16663 113 aa17.35■□□□□ 0.37
LTBR-209ENST00000541102 KIF1BPQ96EK5 621 aa17.35■□□□□ 0.37
LTBR-209ENST00000541102 PTPN18Q99952 460 aa17.35■□□□□ 0.37
LTBR-209ENST00000541102 TESPA1A2RU30 521 aaPredicted RBP17.34■□□□□ 0.37
LTBR-209ENST00000541102 DDTLA6NHG4 134 aaPredicted RBP17.34■□□□□ 0.37
LTBR-209ENST00000541102 SLURP2P0DP57 97 aa17.34■□□□□ 0.37
LTBR-209ENST00000541102 TEX11Q8IYF3 940 aa17.34■□□□□ 0.37
LTBR-209ENST00000541102 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
LTBR-209ENST00000541102 BRI3BPQ8WY22 251 aa17.34■□□□□ 0.37
LTBR-209ENST00000541102 MS4A4AQ96JQ5 239 aa17.34■□□□□ 0.37
LTBR-209ENST00000541102 AATFQ9NY61 560 aaKnown RBP eCLIP17.34■□□□□ 0.37
LTBR-209ENST00000541102 ZNF112Q9UJU3 913 aa17.34■□□□□ 0.37
LTBR-209ENST00000541102 FKTNO75072 461 aa17.33■□□□□ 0.36
LTBR-209ENST00000541102 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
LTBR-209ENST00000541102 BAG3O95817 575 aa17.33■□□□□ 0.36
LTBR-209ENST00000541102 IFIT2P09913 472 aaKnown RBP17.33■□□□□ 0.36
LTBR-209ENST00000541102 SH3RF3Q8TEJ3 882 aaPredicted RBP17.33■□□□□ 0.36
LTBR-209ENST00000541102 CFHR5Q9BXR6 569 aa17.33■□□□□ 0.36
LTBR-209ENST00000541102 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.36
LTBR-209ENST00000541102 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
LTBR-209ENST00000541102 IRF6O14896 467 aa17.32■□□□□ 0.36
LTBR-209ENST00000541102 MAP4K4O95819 1239 aaPredicted RBP17.32■□□□□ 0.36
LTBR-209ENST00000541102 CYP7A1P22680 504 aa17.32■□□□□ 0.36
LTBR-209ENST00000541102 PPIL2Q13356 520 aa17.32■□□□□ 0.36
LTBR-209ENST00000541102 CTU1Q7Z7A3 348 aaKnown RBP17.32■□□□□ 0.36
LTBR-209ENST00000541102 ADGRA1Q86SQ6 560 aa17.32■□□□□ 0.36
LTBR-209ENST00000541102 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
LTBR-209ENST00000541102 ANTXR1Q9H6X2 564 aa17.32■□□□□ 0.36
LTBR-209ENST00000541102 CETPP11597 493 aa17.31■□□□□ 0.36
LTBR-209ENST00000541102 PPATQ06203 517 aa17.31■□□□□ 0.36
LTBR-209ENST00000541102 CRHR2Q13324 411 aa17.31■□□□□ 0.36
LTBR-209ENST00000541102 SNAPC2Q13487 334 aa17.31■□□□□ 0.36
LTBR-209ENST00000541102 SMC5Q8IY18 1101 aa17.31■□□□□ 0.36
LTBR-209ENST00000541102 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
LTBR-209ENST00000541102 ATRNL1Q5VV63 1379 aa17.3■□□□□ 0.36
LTBR-209ENST00000541102 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
LTBR-209ENST00000541102 NPM3O75607 178 aaKnown RBP17.3■□□□□ 0.36
LTBR-209ENST00000541102 PLCG2P16885 1265 aa17.3■□□□□ 0.36
LTBR-209ENST00000541102 PPP4CP60510 307 aa17.3■□□□□ 0.36
LTBR-209ENST00000541102 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
LTBR-209ENST00000541102 NOM1Q5C9Z4 860 aaKnown RBP17.3■□□□□ 0.36
LTBR-209ENST00000541102 B4GALNT3Q6L9W6 998 aa17.3■□□□□ 0.36
LTBR-209ENST00000541102 MAPKAPK5Q8IW41 473 aa17.3■□□□□ 0.36
LTBR-209ENST00000541102 FAM43AQ8N2R8 423 aa17.3■□□□□ 0.36
LTBR-209ENST00000541102 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
LTBR-209ENST00000541102 OSBPL5Q9H0X9 879 aaPredicted RBP17.3■□□□□ 0.36
LTBR-209ENST00000541102 FAM196BA6NMK8 535 aa17.29■□□□□ 0.36
LTBR-209ENST00000541102 MAP3K12Q12852 859 aa17.29■□□□□ 0.36
LTBR-209ENST00000541102 TAF1CQ15572 869 aaPredicted RBP17.29■□□□□ 0.36
LTBR-209ENST00000541102 NOL9Q5SY16 702 aaKnown RBP17.29■□□□□ 0.36
LTBR-209ENST00000541102 ANKRD45Q5TZF3 282 aa17.29■□□□□ 0.36
LTBR-209ENST00000541102 MIGA1Q8NAN2 632 aa17.29■□□□□ 0.36
LTBR-209ENST00000541102 TGFBRAP1Q8WUH2 860 aa17.29■□□□□ 0.36
LTBR-209ENST00000541102 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
LTBR-209ENST00000541102 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.29■□□□□ 0.36
LTBR-209ENST00000541102 PICK1Q9NRD5 415 aa17.29■□□□□ 0.36
LTBR-209ENST00000541102 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
LTBR-209ENST00000541102 NEFLP07196 543 aa17.28■□□□□ 0.36
LTBR-209ENST00000541102 MAP3K10Q02779 954 aa17.28■□□□□ 0.36
LTBR-209ENST00000541102 TSHZ3Q63HK5 1081 aa17.28■□□□□ 0.36
LTBR-209ENST00000541102 SCYL3Q8IZE3 742 aa17.28■□□□□ 0.36
LTBR-209ENST00000541102 GCC1Q96CN9 775 aa17.28■□□□□ 0.36
LTBR-209ENST00000541102 ZFYVE28Q9HCC9 887 aa17.28■□□□□ 0.36
LTBR-209ENST00000541102 ZHX2Q9Y6X8 837 aa17.28■□□□□ 0.36
LTBR-209ENST00000541102 BTBD19C9JJ37 291 aa17.27■□□□□ 0.36
LTBR-209ENST00000541102 GOLIM4O00461 696 aa17.27■□□□□ 0.36
LTBR-209ENST00000541102 IGSF3O75054 1194 aa17.27■□□□□ 0.36
LTBR-209ENST00000541102 DOCK2Q92608 1830 aa17.26■□□□□ 0.35
LTBR-209ENST00000541102 TBC1D12O60347 775 aa17.26■□□□□ 0.35
LTBR-209ENST00000541102 CTNND1O60716 968 aaKnown RBP17.26■□□□□ 0.35
LTBR-209ENST00000541102 TTF1Q15361 905 aaPredicted RBP17.26■□□□□ 0.35
LTBR-209ENST00000541102 BOLA2Q9H3K6 86 aa17.26■□□□□ 0.35
LTBR-209ENST00000541102 SAP30BPQ9UHR5 308 aaKnown RBP17.26■□□□□ 0.35
LTBR-209ENST00000541102 KCNH4Q9UQ05 1017 aa17.26■□□□□ 0.35
LTBR-209ENST00000541102 PTPRAP18433 802 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms