RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 TSPYL4Q9UJ04 414 aa11.08□□□□□ -0.63
CLDN2-202ENST00000540876 RGPD1P0DJD0 1748 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 SLIT2O94813 1529 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 GBP2P32456 591 aaPredicted RBP11.08□□□□□ -0.64
CLDN2-202ENST00000540876 PTPN21Q16825 1174 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 RAB21Q9UL25 225 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 SPATA31A5Q5VU36 1347 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 SPATA31A7Q8IWB4 1347 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 SRCAPQ6ZRS2 3230 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 GNAT3A8MTJ3 354 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 MAP4K4O95819 1239 aaPredicted RBP11.08□□□□□ -0.64
CLDN2-202ENST00000540876 RPS6KA3P51812 740 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 E2F5Q15329 346 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 WLSQ5T9L3 541 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
CLDN2-202ENST00000540876 SPDL1Q96EA4 605 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 GBP3Q9H0R5 595 aa11.08□□□□□ -0.64
CLDN2-202ENST00000540876 ATP10DQ9P241 1426 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 CUTAO60888 179 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 SYF2O95926 243 aaKnown RBP11.07□□□□□ -0.64
CLDN2-202ENST00000540876 ME3Q16798 604 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 CCAR1Q8IX12 1150 aaKnown RBP11.07□□□□□ -0.64
CLDN2-202ENST00000540876 AMOTL1Q8IY63 956 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 IL17RAQ96F46 866 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 MEIS3Q99687 375 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 DDX20Q9UHI6 824 aaKnown RBP11.07□□□□□ -0.64
CLDN2-202ENST00000540876 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLDN2-202ENST00000540876 CDHR2Q9BYE9 1310 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 HMMRO75330 724 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 EZRP15311 586 aaKnown RBP11.07□□□□□ -0.64
CLDN2-202ENST00000540876 CDR1P51861 262 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 FAM76AQ8TAV0 307 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 KIFC2Q96AC6 838 aa11.07□□□□□ -0.64
CLDN2-202ENST00000540876 ZSCAN31Q96LW9 406 aaPredicted RBP11.07□□□□□ -0.64
CLDN2-202ENST00000540876 JAKMIP1Q96N16 626 aaKnown RBP11.07□□□□□ -0.64
CLDN2-202ENST00000540876 PPP1R12BO60237 982 aaPredicted RBP11.06□□□□□ -0.64
CLDN2-202ENST00000540876 PRPF6O94906 941 aaKnown RBP11.06□□□□□ -0.64
CLDN2-202ENST00000540876 SSBP05455 408 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLDN2-202ENST00000540876 PDCP20941 246 aa11.06□□□□□ -0.64
CLDN2-202ENST00000540876 ST3GAL1Q11201 340 aa11.06□□□□□ -0.64
CLDN2-202ENST00000540876 CCDC73Q6ZRK6 1079 aa11.06□□□□□ -0.64
CLDN2-202ENST00000540876 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
CLDN2-202ENST00000540876 SCLT1Q96NL6 688 aa11.06□□□□□ -0.64
CLDN2-202ENST00000540876 SH2B1Q9NRF2 756 aaPredicted RBP11.06□□□□□ -0.64
CLDN2-202ENST00000540876 LMOD1P29536 600 aaPredicted RBP11.06□□□□□ -0.64
CLDN2-202ENST00000540876 VPS72Q15906 364 aa11.06□□□□□ -0.64
CLDN2-202ENST00000540876 RNF187Q5TA31 235 aaPredicted RBP11.06□□□□□ -0.64
CLDN2-202ENST00000540876 MSANTD4Q8NCY6 345 aa11.06□□□□□ -0.64
CLDN2-202ENST00000540876 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
CLDN2-202ENST00000540876 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
CLDN2-202ENST00000540876 COL14A1Q05707 1796 aaKnown RBP11.06□□□□□ -0.64
CLDN2-202ENST00000540876 FSBPO95073 299 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 ZNF202O95125 648 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 PHKG2P15735 406 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 GNGT1P63211 74 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 ICA1Q05084 483 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 TRIM74Q86UV6 250 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 TRIM73Q86UV7 250 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 KLHL23Q8NBE8 558 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 SPDYE1Q8NFV5 336 aaPredicted RBP11.05□□□□□ -0.64
CLDN2-202ENST00000540876 GDAP1L1Q96MZ0 367 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 LRRCC1Q9C099 1032 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
CLDN2-202ENST00000540876 SPG7Q9UQ90 795 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 KCNQ3O43525 872 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 PDHBP11177 359 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 RPUSD2Q8IZ73 545 aaKnown RBP11.05□□□□□ -0.64
CLDN2-202ENST00000540876 SAAL1Q96ER3 474 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 XAGE2Q96GT9 111 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 PLCH1Q4KWH8 1693 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 GOLGA6L9A6NEM1 432 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 SHOX2O60902 331 aaPredicted RBP11.05□□□□□ -0.64
CLDN2-202ENST00000540876 KCNB1Q14721 858 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 CCDC40Q4G0X9 1142 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 AMOTQ4VCS5 1084 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 NFXL1Q6ZNB6 911 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 G2E3Q7L622 706 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 ACSBG1Q96GR2 724 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 SDF4Q9BRK5 362 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
CLDN2-202ENST00000540876 CAPS2Q9BXY5 557 aa11.05□□□□□ -0.64
CLDN2-202ENST00000540876 ANKRD18BA2A2Z9 1011 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 GOLGA6CA6NDK9 693 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 BIN1O00499 593 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 NDUFAB1O14561 156 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 TFRCP02786 760 aaKnown RBP11.04□□□□□ -0.64
CLDN2-202ENST00000540876 GOLGA6DP0CG33 693 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 PECAM1P16284 738 aaPredicted RBP11.04□□□□□ -0.64
CLDN2-202ENST00000540876 FANCCQ00597 558 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 SLC39A6Q13433 755 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 DDB1Q16531 1140 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 PDILTQ8N807 584 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 DESI2Q9BSY9 194 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 GOLGA6AQ9NYA3 693 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 G3BP2Q9UN86 482 aaKnown RBP11.04□□□□□ -0.64
CLDN2-202ENST00000540876 ARHGAP6O43182 974 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 SNCBQ16143 134 aa11.04□□□□□ -0.64
CLDN2-202ENST00000540876 DPCR1Q3MIW9 517 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms