RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.33■□□□□ 0.05
PRICKLE3-205ENST00000540849 EPB41L4AQ9HCS5 686 aaPredicted RBP15.33■□□□□ 0.05
PRICKLE3-205ENST00000540849 TACC3Q9Y6A5 838 aa15.33■□□□□ 0.05
PRICKLE3-205ENST00000540849 DOCK2Q92608 1830 aa15.33■□□□□ 0.05
PRICKLE3-205ENST00000540849 IRS4O14654 1257 aaPredicted RBP15.33■□□□□ 0.04
PRICKLE3-205ENST00000540849 IARSP41252 1262 aaKnown RBP15.33■□□□□ 0.04
PRICKLE3-205ENST00000540849 EVA1CP58658 441 aa15.33■□□□□ 0.04
PRICKLE3-205ENST00000540849 TMEM67Q5HYA8 995 aa15.33■□□□□ 0.04
PRICKLE3-205ENST00000540849 SYTL4Q96C24 671 aaPredicted RBP15.33■□□□□ 0.04
PRICKLE3-205ENST00000540849 TBC1D2BQ9UPU7 963 aa15.33■□□□□ 0.04
PRICKLE3-205ENST00000540849 SOS2Q07890 1332 aaPredicted RBP15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 NRDCO43847 1150 aa15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 CUTAO60888 179 aa15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 MYL5Q02045 173 aa15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 SGMS1Q86VZ5 419 aa15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 STK36Q9NRP7 1315 aa15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 CTDSPL2Q05D32 466 aa15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 SYT10Q6XYQ8 523 aa15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 AIDAQ96BJ3 306 aa15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 L2HGDHQ9H9P8 463 aa15.32■□□□□ 0.04
PRICKLE3-205ENST00000540849 NUP98P52948 1817 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 UQCRFS1P1P0C7P4 283 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 TRIM29Q14134 588 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 ALX1Q15699 326 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 LONRF3Q496Y0 759 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 FBXO38Q6PIJ6 1188 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 SLC26A6Q9BXS9 759 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 MORC2Q9Y6X9 1032 aaPredicted RBP15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 NHSL1Q5SYE7 1610 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 SLIT2O94813 1529 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 UBASH3AP57075 661 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 KRBA2Q6ZNG9 492 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 FOXP4Q8IVH2 680 aaPredicted RBP15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 LRRN4CLQ8ND94 238 aa15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 TRMT112Q9UI30 125 aaKnown RBP15.31■□□□□ 0.04
PRICKLE3-205ENST00000540849 MBD4O95243 580 aa15.3■□□□□ 0.04
PRICKLE3-205ENST00000540849 FGFR2P21802 821 aa15.3■□□□□ 0.04
PRICKLE3-205ENST00000540849 IFNL3Q8IZI9 196 aa15.3■□□□□ 0.04
PRICKLE3-205ENST00000540849 HELBQ8NG08 1087 aaPredicted RBP15.3■□□□□ 0.04
PRICKLE3-205ENST00000540849 SLC4A9Q96Q91 983 aa15.3■□□□□ 0.04
PRICKLE3-205ENST00000540849 NID2Q14112 1375 aa15.3■□□□□ 0.04
PRICKLE3-205ENST00000540849 TMEM232C9JQI7 657 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 FOXN1O15353 648 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 CBFA2T2O43439 604 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 PDE8AO60658 829 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 FMNL1O95466 1100 aaPredicted RBP15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 SERPINC1P01008 464 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 LIFRP42702 1097 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 PDE4BQ07343 736 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 SSRP1Q08945 709 aaKnown RBP15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 PUM3Q15397 648 aaKnown RBP15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 STK11IPQ8N1F8 1099 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 CNNM3Q8NE01 707 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 ZSWIM5Q9P217 1185 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 KCNH3Q9ULD8 1083 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 PATL2C9JE40 543 aaKnown RBP15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 CYP19A1P11511 503 aaPredicted RBP15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 BMP6P22004 513 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 GOLGA8FQ08AF8 430 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 GOLGA8DPQ0D2H9 430 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 PTPN21Q16825 1174 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 CFAP100Q494V2 611 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 OLFM4Q6UX06 510 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 VSTM4Q8IW00 320 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 NAPBQ9H115 298 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 ARMT1Q9H993 441 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 PCDHA5Q9Y5H7 936 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 SLC12A7Q9Y666 1083 aa15.29■□□□□ 0.04
PRICKLE3-205ENST00000540849 SPECC1Q5M775 1068 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 NOSTRINQ8IVI9 506 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 KRI1Q8N9T8 703 aaKnown RBP15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 SPATA5Q8NB90 893 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 LPIN2Q92539 896 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 TMX1Q9H3N1 280 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 INTS13Q9NVM9 706 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 FANCLQ9NW38 375 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 BCORQ6W2J9 1755 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 TUBB4AP04350 444 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 TOB1P50616 345 aaPredicted RBP15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 GRIN1Q05586 938 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 RASGRF1Q13972 1273 aa15.28■□□□□ 0.04
PRICKLE3-205ENST00000540849 BTBD18B2RXH4 712 aa15.27■□□□□ 0.04
PRICKLE3-205ENST00000540849 SNAP23O00161 211 aa15.27■□□□□ 0.04
PRICKLE3-205ENST00000540849 IGSF3O75054 1194 aa15.27■□□□□ 0.04
PRICKLE3-205ENST00000540849 MMP1P03956 469 aa15.27■□□□□ 0.04
PRICKLE3-205ENST00000540849 IFNAR1P17181 557 aa15.27■□□□□ 0.04
PRICKLE3-205ENST00000540849 MDM2Q00987 491 aaPredicted RBP15.27■□□□□ 0.04
PRICKLE3-205ENST00000540849 AKNAD1Q5T1N1 836 aa15.27■□□□□ 0.04
PRICKLE3-205ENST00000540849 KCNJ14Q9UNX9 436 aa15.27■□□□□ 0.04
PRICKLE3-205ENST00000540849 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRICKLE3-205ENST00000540849 MROH5Q6ZUA9 1318 aa15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 GSG1L2A8MUP6 293 aa15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 CCP110O43303 1012 aa15.27■□□□□ 0.03
PRICKLE3-205ENST00000540849 PRKAB2O43741 272 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms