RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 ZNF112Q9UJU3 913 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 FPGT-TNNI3KV9GXZ4 949 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 MAST2Q6P0Q8 1798 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 MKI67P46013 3256 aaKnown RBP11.06□□□□□ -0.64
LMO3-222ENST00000540445 ATRNL1Q5VV63 1379 aa11.06□□□□□ -0.64
LMO3-222ENST00000540445 WDHD1O75717 1129 aaPredicted RBP11.06□□□□□ -0.64
LMO3-222ENST00000540445 ARID4AP29374 1257 aaPredicted RBP11.06□□□□□ -0.64
LMO3-222ENST00000540445 INPP5BP32019 993 aa11.06□□□□□ -0.64
LMO3-222ENST00000540445 MCAMP43121 646 aa11.06□□□□□ -0.64
LMO3-222ENST00000540445 RGS3P49796 1198 aa11.06□□□□□ -0.64
LMO3-222ENST00000540445 DBNDD2Q9BQY9 259 aa11.06□□□□□ -0.64
LMO3-222ENST00000540445 NOL10Q9BSC4 688 aaKnown RBP11.06□□□□□ -0.64
LMO3-222ENST00000540445 IDI2Q9BXS1 227 aa11.06□□□□□ -0.64
LMO3-222ENST00000540445 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
LMO3-222ENST00000540445 GPR108Q9NPR9 543 aa11.06□□□□□ -0.64
LMO3-222ENST00000540445 KIAA0100Q14667 2235 aaKnown RBP11.06□□□□□ -0.64
LMO3-222ENST00000540445 MROH7-TTC4A0A0A0MT08 1334 aa11.06□□□□□ -0.64
LMO3-222ENST00000540445 BRCA2P51587 3418 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 SIPA1L1O43166 1804 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 GPR75-ASB3A0A0A6YYF3 556 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 IRF6O14896 467 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 ENTPD3O75355 529 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 CETPP11597 493 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 PPATQ06203 517 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 PPIL2Q13356 520 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 SNAPC2Q13487 334 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 TAF1CQ15572 869 aaPredicted RBP11.05□□□□□ -0.64
LMO3-222ENST00000540445 FAM43AQ8N2R8 423 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 CD99L2Q8TCZ2 262 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 NSUN4Q96CB9 384 aaKnown RBP11.05□□□□□ -0.64
LMO3-222ENST00000540445 ERO1AQ96HE7 468 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 CCDC8Q9H0W5 538 aaPredicted RBP11.05□□□□□ -0.64
LMO3-222ENST00000540445 ZFYVE28Q9HCC9 887 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 ZCCHC17Q9NP64 241 aaKnown RBP11.05□□□□□ -0.64
LMO3-222ENST00000540445 RCAN3Q9UKA8 241 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 NOP58Q9Y2X3 529 aaKnown RBP11.05□□□□□ -0.64
LMO3-222ENST00000540445 TRIM17Q9Y577 477 aa11.05□□□□□ -0.64
LMO3-222ENST00000540445 SP3Q02447 781 aa11.04□□□□□ -0.64
LMO3-222ENST00000540445 NOL9Q5SY16 702 aaKnown RBP11.04□□□□□ -0.64
LMO3-222ENST00000540445 CEP85Q6P2H3 762 aa11.04□□□□□ -0.64
LMO3-222ENST00000540445 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
LMO3-222ENST00000540445 ZNF384Q8TF68 577 aa11.04□□□□□ -0.64
LMO3-222ENST00000540445 EXOC6BQ9Y2D4 811 aa11.04□□□□□ -0.64
LMO3-222ENST00000540445 PTPN22Q9Y2R2 807 aa11.04□□□□□ -0.64
LMO3-222ENST00000540445 MYH1P12882 1939 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 DOCK3Q8IZD9 2030 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 DDTLA6NHG4 134 aaPredicted RBP11.03□□□□□ -0.64
LMO3-222ENST00000540445 BTBD19C9JJ37 291 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 APBB1O00213 710 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 BAG3O95817 575 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 MAP3K10Q02779 954 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 HSP90AB4PQ58FF6 505 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 NAA16Q6N069 864 aaPredicted RBP11.03□□□□□ -0.64
LMO3-222ENST00000540445 SH3BP5LQ7L8J4 393 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 ERC1Q8IUD2 1116 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 EAF2Q96CJ1 260 aaPredicted RBP11.03□□□□□ -0.64
LMO3-222ENST00000540445 CHMP4BQ9H444 224 aaKnown RBP11.03□□□□□ -0.64
LMO3-222ENST00000540445 DDX4Q9NQI0 724 aaKnown RBP11.03□□□□□ -0.64
LMO3-222ENST00000540445 PICK1Q9NRD5 415 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 DDX19BQ9UMR2 479 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
LMO3-222ENST00000540445 PHF20L1A8MW92 1017 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 HMMRO75330 724 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 CYP2E1P05181 493 aaPredicted RBP11.02□□□□□ -0.65
LMO3-222ENST00000540445 ZAP70P43403 619 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 RHBDL3P58872 404 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 MOGSQ13724 837 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 ARHGEF6Q15052 776 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 AACSQ86V21 672 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 RPAP2Q8IXW5 612 aaPredicted RBP11.02□□□□□ -0.65
LMO3-222ENST00000540445 TEX11Q8IYF3 940 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 EFCC1Q9HA90 598 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 AATFQ9NY61 560 aaKnown RBP eCLIP11.02□□□□□ -0.65
LMO3-222ENST00000540445 DBNLQ9UJU6 430 aaKnown RBP11.02□□□□□ -0.65
LMO3-222ENST00000540445 ZHX2Q9Y6X8 837 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 ADGRA2Q96PE1 1338 aa11.02□□□□□ -0.65
LMO3-222ENST00000540445 COL2A1P02458 1487 aaPredicted RBP11.01□□□□□ -0.65
LMO3-222ENST00000540445 LOC285556D6RIA3 1793 aa11.01□□□□□ -0.65
LMO3-222ENST00000540445 TLR2O60603 784 aa11.01□□□□□ -0.65
LMO3-222ENST00000540445 NPM3O75607 178 aaKnown RBP11.01□□□□□ -0.65
LMO3-222ENST00000540445 MAP4K4O95819 1239 aaPredicted RBP11.01□□□□□ -0.65
LMO3-222ENST00000540445 POTEDQ86YR6 584 aa11.01□□□□□ -0.65
LMO3-222ENST00000540445 SH3RF3Q8TEJ3 882 aaPredicted RBP11.01□□□□□ -0.65
LMO3-222ENST00000540445 ARMC5Q96C12 935 aa11.01□□□□□ -0.65
LMO3-222ENST00000540445 ZNF512BQ96KM6 892 aaPredicted RBP11.01□□□□□ -0.65
LMO3-222ENST00000540445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.01□□□□□ -0.65
LMO3-222ENST00000540445 IL1RAPL2Q9NP60 686 aa11.01□□□□□ -0.65
LMO3-222ENST00000540445 TLR7Q9NYK1 1049 aaKnown RBP11.01□□□□□ -0.65
LMO3-222ENST00000540445 CXCL11O14625 94 aa11□□□□□ -0.65
LMO3-222ENST00000540445 CTNND1O60716 968 aaKnown RBP11□□□□□ -0.65
LMO3-222ENST00000540445 IDH1O75874 414 aaKnown RBP11□□□□□ -0.65
LMO3-222ENST00000540445 ECM2O94769 699 aaPredicted RBP11□□□□□ -0.65
LMO3-222ENST00000540445 SLURP2P0DP57 97 aa11□□□□□ -0.65
LMO3-222ENST00000540445 PLCG2P16885 1265 aa11□□□□□ -0.65
LMO3-222ENST00000540445 KIF22Q14807 665 aa11□□□□□ -0.65
LMO3-222ENST00000540445 C17orf99Q6UX52 265 aa11□□□□□ -0.65
LMO3-222ENST00000540445 ANKRD23Q86SG2 305 aa11□□□□□ -0.65
LMO3-222ENST00000540445 SCYL3Q8IZE3 742 aa11□□□□□ -0.65
LMO3-222ENST00000540445 CLASRPQ8N2M8 674 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms