RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 SSC5DA1L4H1 1573 aa16.26■□□□□ 0.19
PRPF19-204ENST00000539960 RFX7Q2KHR2 1363 aa16.26■□□□□ 0.19
PRPF19-204ENST00000539960 RPAP1Q9BWH6 1393 aaPredicted RBP16.26■□□□□ 0.19
PRPF19-204ENST00000539960 MAGEB6P1A0A0J9YX57 407 aa16.25■□□□□ 0.19
PRPF19-204ENST00000539960 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
PRPF19-204ENST00000539960 MAP2K2P36507 400 aa16.25■□□□□ 0.19
PRPF19-204ENST00000539960 UBE3CQ15386 1083 aa16.25■□□□□ 0.19
PRPF19-204ENST00000539960 DCAF15Q66K64 600 aa16.25■□□□□ 0.19
PRPF19-204ENST00000539960 ZSCAN25Q6NSZ9 544 aa16.25■□□□□ 0.19
PRPF19-204ENST00000539960 MIGA2Q7L4E1 593 aa16.25■□□□□ 0.19
PRPF19-204ENST00000539960 SH3BP5LQ7L8J4 393 aa16.25■□□□□ 0.19
PRPF19-204ENST00000539960 ZSCAN29Q8IWY8 852 aaPredicted RBP16.25■□□□□ 0.19
PRPF19-204ENST00000539960 TGFBRAP1Q8WUH2 860 aa16.25■□□□□ 0.19
PRPF19-204ENST00000539960 RIOK1Q9BRS2 568 aaKnown RBP16.25■□□□□ 0.19
PRPF19-204ENST00000539960 PAPPA2Q9BXP8 1791 aa16.24■□□□□ 0.19
PRPF19-204ENST00000539960 DDTLA6NHG4 134 aaPredicted RBP16.24■□□□□ 0.19
PRPF19-204ENST00000539960 AOC2O75106 756 aa16.24■□□□□ 0.19
PRPF19-204ENST00000539960 MAP3K9P80192 1104 aa16.24■□□□□ 0.19
PRPF19-204ENST00000539960 SLFNL1Q499Z3 407 aa16.24■□□□□ 0.19
PRPF19-204ENST00000539960 SLC10A4Q96EP9 437 aa16.24■□□□□ 0.19
PRPF19-204ENST00000539960 CSRNP1Q96S65 589 aa16.24■□□□□ 0.19
PRPF19-204ENST00000539960 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
PRPF19-204ENST00000539960 MAP3K10Q02779 954 aa16.23■□□□□ 0.19
PRPF19-204ENST00000539960 NOGQ13253 232 aa16.23■□□□□ 0.19
PRPF19-204ENST00000539960 PLEKHM2Q8IWE5 1019 aa16.23■□□□□ 0.19
PRPF19-204ENST00000539960 ANKRD13AQ8IZ07 590 aa16.23■□□□□ 0.19
PRPF19-204ENST00000539960 MYO5AQ9Y4I1 1855 aaKnown RBP16.22■□□□□ 0.19
PRPF19-204ENST00000539960 CHGBP05060 677 aa16.22■□□□□ 0.19
PRPF19-204ENST00000539960 SLC10A3P09131 477 aa16.22■□□□□ 0.19
PRPF19-204ENST00000539960 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.22■□□□□ 0.19
PRPF19-204ENST00000539960 RASAL3Q86YV0 1011 aa16.22■□□□□ 0.19
PRPF19-204ENST00000539960 MAPKAPK5Q8IW41 473 aa16.22■□□□□ 0.19
PRPF19-204ENST00000539960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
PRPF19-204ENST00000539960 CLMNQ96JQ2 1002 aa16.22■□□□□ 0.19
PRPF19-204ENST00000539960 ZNF341Q9BYN7 854 aa16.22■□□□□ 0.19
PRPF19-204ENST00000539960 DHX36Q9H2U1 1008 aaKnown RBP16.22■□□□□ 0.19
PRPF19-204ENST00000539960 OSBPL3Q9H4L5 887 aa16.22■□□□□ 0.19
PRPF19-204ENST00000539960 ZNF112Q9UJU3 913 aa16.22■□□□□ 0.19
PRPF19-204ENST00000539960 RNF113AO15541 343 aaKnown RBP16.21■□□□□ 0.19
PRPF19-204ENST00000539960 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
PRPF19-204ENST00000539960 USP5P45974 858 aa16.21■□□□□ 0.19
PRPF19-204ENST00000539960 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
PRPF19-204ENST00000539960 ZIC5Q96T25 663 aa16.21■□□□□ 0.19
PRPF19-204ENST00000539960 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
PRPF19-204ENST00000539960 ATRNL1Q5VV63 1379 aa16.21■□□□□ 0.19
PRPF19-204ENST00000539960 FLT1P17948 1338 aa16.2■□□□□ 0.18
PRPF19-204ENST00000539960 TBC1D12O60347 775 aa16.2■□□□□ 0.18
PRPF19-204ENST00000539960 NEFLP07196 543 aa16.2■□□□□ 0.18
PRPF19-204ENST00000539960 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
PRPF19-204ENST00000539960 SPRYD7Q5W111 196 aa16.2■□□□□ 0.18
PRPF19-204ENST00000539960 EVI5LQ96CN4 794 aa16.2■□□□□ 0.18
PRPF19-204ENST00000539960 WRNIP1Q96S55 665 aa16.2■□□□□ 0.18
PRPF19-204ENST00000539960 PUS7LQ9H0K6 701 aaKnown RBP16.2■□□□□ 0.18
PRPF19-204ENST00000539960 ARMT1Q9H993 441 aa16.2■□□□□ 0.18
PRPF19-204ENST00000539960 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
PRPF19-204ENST00000539960 PI4KBQ9UBF8 816 aa16.2■□□□□ 0.18
PRPF19-204ENST00000539960 CSADQ9Y600 493 aa16.2■□□□□ 0.18
PRPF19-204ENST00000539960 DOCK2Q92608 1830 aa16.19■□□□□ 0.18
PRPF19-204ENST00000539960 PHF20L1A8MW92 1017 aa16.19■□□□□ 0.18
PRPF19-204ENST00000539960 MBD4O95243 580 aa16.19■□□□□ 0.18
PRPF19-204ENST00000539960 PDE4AP27815 886 aa16.19■□□□□ 0.18
PRPF19-204ENST00000539960 MAP2K1Q02750 393 aaPredicted RBP16.19■□□□□ 0.18
PRPF19-204ENST00000539960 VGLL4Q14135 290 aa16.19■□□□□ 0.18
PRPF19-204ENST00000539960 FOXP4Q8IVH2 680 aaPredicted RBP16.19■□□□□ 0.18
PRPF19-204ENST00000539960 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
PRPF19-204ENST00000539960 ZKSCAN4Q969J2 545 aaPredicted RBP16.19■□□□□ 0.18
PRPF19-204ENST00000539960 FSD1Q9BTV5 496 aa16.19■□□□□ 0.18
PRPF19-204ENST00000539960 WBP1LQ9NX94 342 aa16.19■□□□□ 0.18
PRPF19-204ENST00000539960 SAP30BPQ9UHR5 308 aaKnown RBP16.19■□□□□ 0.18
PRPF19-204ENST00000539960 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
PRPF19-204ENST00000539960 MAST2Q6P0Q8 1798 aa16.18■□□□□ 0.18
PRPF19-204ENST00000539960 COL2A1P02458 1487 aaPredicted RBP16.18■□□□□ 0.18
PRPF19-204ENST00000539960 SLURP2P0DP57 97 aa16.18■□□□□ 0.18
PRPF19-204ENST00000539960 INPP5BP32019 993 aa16.18■□□□□ 0.18
PRPF19-204ENST00000539960 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
PRPF19-204ENST00000539960 APPBP2Q92624 585 aa16.18■□□□□ 0.18
PRPF19-204ENST00000539960 OSBP2Q969R2 916 aa16.18■□□□□ 0.18
PRPF19-204ENST00000539960 AIDAQ96BJ3 306 aa16.18■□□□□ 0.18
PRPF19-204ENST00000539960 WNK4Q96J92 1243 aa16.18■□□□□ 0.18
PRPF19-204ENST00000539960 ELP3Q9H9T3 547 aa16.18■□□□□ 0.18
PRPF19-204ENST00000539960 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.18■□□□□ 0.18
PRPF19-204ENST00000539960 HERC5Q9UII4 1024 aaKnown RBP16.18■□□□□ 0.18
PRPF19-204ENST00000539960 PRKAB2O43741 272 aa16.17■□□□□ 0.18
PRPF19-204ENST00000539960 MKRN3Q13064 507 aaKnown RBP16.17■□□□□ 0.18
PRPF19-204ENST00000539960 METTL16Q86W50 562 aaKnown RBP16.17■□□□□ 0.18
PRPF19-204ENST00000539960 TICAM2Q86XR7 235 aa16.17■□□□□ 0.18
PRPF19-204ENST00000539960 STRBPQ96SI9 672 aaKnown RBP16.17■□□□□ 0.18
PRPF19-204ENST00000539960 SNCAIPQ9Y6H5 919 aa16.17■□□□□ 0.18
PRPF19-204ENST00000539960 TRIM6-TRIM34B2RNG4 842 aa16.16■□□□□ 0.18
PRPF19-204ENST00000539960 HLA-DOAP06340 250 aa16.16■□□□□ 0.18
PRPF19-204ENST00000539960 ZBTB48P10074 688 aaPredicted RBP16.16■□□□□ 0.18
PRPF19-204ENST00000539960 GJA5P36382 358 aa16.16■□□□□ 0.18
PRPF19-204ENST00000539960 CENPQQ7L2Z9 268 aaPredicted RBP16.16■□□□□ 0.18
PRPF19-204ENST00000539960 TTC6Q86TZ1 520 aa16.16■□□□□ 0.18
PRPF19-204ENST00000539960 ERO1BQ86YB8 467 aa16.16■□□□□ 0.18
PRPF19-204ENST00000539960 SDR42E1Q8WUS8 393 aa16.16■□□□□ 0.18
PRPF19-204ENST00000539960 OPTNQ96CV9 577 aa16.16■□□□□ 0.18
PRPF19-204ENST00000539960 DCP1AQ9NPI6 582 aaPredicted RBP16.16■□□□□ 0.18
PRPF19-204ENST00000539960 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
PRPF19-204ENST00000539960 SPDYE5A6NIY4 337 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms