RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 IL25Q9H293 177 aa18.45■□□□□ 0.54
DDB1-216ENST00000539739 GSG1L2A8MUP6 293 aa18.44■□□□□ 0.54
DDB1-216ENST00000539739 HSPD1P10809 573 aaKnown RBP18.44■□□□□ 0.54
DDB1-216ENST00000539739 SULF1Q8IWU6 871 aa18.44■□□□□ 0.54
DDB1-216ENST00000539739 DCP1AQ9NPI6 582 aaPredicted RBP18.44■□□□□ 0.54
DDB1-216ENST00000539739 DDX4Q9NQI0 724 aaKnown RBP18.44■□□□□ 0.54
DDB1-216ENST00000539739 FAM198AQ9UFP1 575 aa18.44■□□□□ 0.54
DDB1-216ENST00000539739 FLT1P17948 1338 aa18.44■□□□□ 0.54
DDB1-216ENST00000539739 REC8O95072 547 aa18.43■□□□□ 0.54
DDB1-216ENST00000539739 TDO2P48775 406 aa18.43■□□□□ 0.54
DDB1-216ENST00000539739 TCP10Q12799 353 aa18.43■□□□□ 0.54
DDB1-216ENST00000539739 AMOTL1Q8IY63 956 aa18.43■□□□□ 0.54
DDB1-216ENST00000539739 FAM151AQ8WW52 585 aa18.43■□□□□ 0.54
DDB1-216ENST00000539739 DSCC1Q9BVC3 393 aa18.43■□□□□ 0.54
DDB1-216ENST00000539739 ANO2Q9NQ90 1003 aa18.43■□□□□ 0.54
DDB1-216ENST00000539739 ECM29Q5VYK3 1845 aa18.43■□□□□ 0.54
DDB1-216ENST00000539739 POTEIP0CG38 1075 aa18.42■□□□□ 0.54
DDB1-216ENST00000539739 POTEJP0CG39 1038 aa18.42■□□□□ 0.54
DDB1-216ENST00000539739 RASA3Q14644 834 aa18.42■□□□□ 0.54
DDB1-216ENST00000539739 VPS53Q5VIR6 699 aa18.42■□□□□ 0.54
DDB1-216ENST00000539739 IFNL3Q8IZI9 196 aa18.42■□□□□ 0.54
DDB1-216ENST00000539739 ZNF784Q8NCA9 323 aaPredicted RBP18.42■□□□□ 0.54
DDB1-216ENST00000539739 OSBPL5Q9H0X9 879 aaPredicted RBP18.42■□□□□ 0.54
DDB1-216ENST00000539739 NAPBQ9H115 298 aa18.42■□□□□ 0.54
DDB1-216ENST00000539739 DEFB129Q9H1M3 183 aa18.42■□□□□ 0.54
DDB1-216ENST00000539739 MCM9Q9NXL9 1143 aa18.42■□□□□ 0.54
DDB1-216ENST00000539739 PPP2R3BQ9Y5P8 575 aa18.42■□□□□ 0.54
DDB1-216ENST00000539739 CDC37L1Q7L3B6 337 aa18.41■□□□□ 0.54
DDB1-216ENST00000539739 KRT26Q7Z3Y9 468 aa18.41■□□□□ 0.54
DDB1-216ENST00000539739 ZSCAN29Q8IWY8 852 aaPredicted RBP18.41■□□□□ 0.54
DDB1-216ENST00000539739 DHX36Q9H2U1 1008 aaKnown RBP18.41■□□□□ 0.54
DDB1-216ENST00000539739 POLR3DP05423 398 aaPredicted RBP18.41■□□□□ 0.54
DDB1-216ENST00000539739 ALX1Q15699 326 aa18.41■□□□□ 0.54
DDB1-216ENST00000539739 C8orf34Q49A92 452 aa18.41■□□□□ 0.54
DDB1-216ENST00000539739 MKRN1Q9UHC7 482 aaKnown RBP18.41■□□□□ 0.54
DDB1-216ENST00000539739 CTNNA3Q9UI47 895 aa18.41■□□□□ 0.54
DDB1-216ENST00000539739 SCAF8Q9UPN6 1271 aaKnown RBP18.41■□□□□ 0.54
DDB1-216ENST00000539739 CNTNAP1P78357 1384 aa18.4■□□□□ 0.54
DDB1-216ENST00000539739 KIF3CO14782 793 aa18.4■□□□□ 0.54
DDB1-216ENST00000539739 TMEM39BQ9GZU3 492 aa18.4■□□□□ 0.54
DDB1-216ENST00000539739 EPB41L4AQ9HCS5 686 aaPredicted RBP18.4■□□□□ 0.54
DDB1-216ENST00000539739 ARPP21Q9UBL0 812 aaPredicted RBP18.4■□□□□ 0.54
DDB1-216ENST00000539739 SAP30BPQ9UHR5 308 aaKnown RBP18.4■□□□□ 0.54
DDB1-216ENST00000539739 FGAP02671 866 aa18.39■□□□□ 0.53
DDB1-216ENST00000539739 HLA-DOAP06340 250 aa18.39■□□□□ 0.53
DDB1-216ENST00000539739 PTH1RQ03431 593 aa18.39■□□□□ 0.53
DDB1-216ENST00000539739 MAP1SQ66K74 1059 aaPredicted RBP18.39■□□□□ 0.53
DDB1-216ENST00000539739 CHADLQ6NUI6 762 aa18.39■□□□□ 0.53
DDB1-216ENST00000539739 TTC6Q86TZ1 520 aa18.39■□□□□ 0.53
DDB1-216ENST00000539739 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
DDB1-216ENST00000539739 ZFPM1Q8IX07 1006 aa18.39■□□□□ 0.53
DDB1-216ENST00000539739 LSG1Q9H089 658 aaKnown RBP18.39■□□□□ 0.53
DDB1-216ENST00000539739 PALD1Q9ULE6 856 aa18.39■□□□□ 0.53
DDB1-216ENST00000539739 ZMYM6O95789 1325 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 USP17L12C9JPN9 530 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 USP17L21D6R901 530 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 FOXP2O15409 715 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 MAP4K1Q92918 833 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
DDB1-216ENST00000539739 ADM5C9JUS6 153 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 SBK1Q52WX2 424 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 CTR9Q6PD62 1173 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 HOOK2Q96ED9 719 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 CSRNP1Q96S65 589 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 GLIS2Q9BZE0 524 aaPredicted RBP18.38■□□□□ 0.53
DDB1-216ENST00000539739 PI4KBQ9UBF8 816 aa18.38■□□□□ 0.53
DDB1-216ENST00000539739 COL2A1P02458 1487 aaPredicted RBP18.37■□□□□ 0.53
DDB1-216ENST00000539739 ATRNL1Q5VV63 1379 aa18.37■□□□□ 0.53
DDB1-216ENST00000539739 DDTLA6NHG4 134 aaPredicted RBP18.37■□□□□ 0.53
DDB1-216ENST00000539739 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
DDB1-216ENST00000539739 EPB41L2O43491 1005 aaKnown RBP18.37■□□□□ 0.53
DDB1-216ENST00000539739 SUPT20HL1Q3ZLR7 823 aa18.37■□□□□ 0.53
DDB1-216ENST00000539739 CDK5RAP2Q96SN8 1893 aa18.36■□□□□ 0.53
DDB1-216ENST00000539739 FOCADQ5VW36 1801 aa18.36■□□□□ 0.53
DDB1-216ENST00000539739 POLR2AP24928 1970 aaKnown RBP18.36■□□□□ 0.53
DDB1-216ENST00000539739 IMMTQ16891 758 aaKnown RBP18.36■□□□□ 0.53
DDB1-216ENST00000539739 C12orf60Q5U649 245 aa18.36■□□□□ 0.53
DDB1-216ENST00000539739 SH3BP5LQ7L8J4 393 aa18.36■□□□□ 0.53
DDB1-216ENST00000539739 TEPSINQ96N21 525 aa18.36■□□□□ 0.53
DDB1-216ENST00000539739 RBM8AQ9Y5S9 174 aaKnown RBP18.36■□□□□ 0.53
DDB1-216ENST00000539739 TOMM70O94826 608 aa18.35■□□□□ 0.53
DDB1-216ENST00000539739 SLC3A2P08195 630 aaKnown RBP18.35■□□□□ 0.53
DDB1-216ENST00000539739 NF2P35240 595 aa18.35■□□□□ 0.53
DDB1-216ENST00000539739 SLC4A8Q2Y0W8 1093 aa18.35■□□□□ 0.53
DDB1-216ENST00000539739 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
DDB1-216ENST00000539739 SMC1BQ8NDV3 1235 aa18.35■□□□□ 0.53
DDB1-216ENST00000539739 TRIM34Q9BYJ4 488 aa18.35■□□□□ 0.53
DDB1-216ENST00000539739 NAV1Q8NEY1 1877 aa18.35■□□□□ 0.53
DDB1-216ENST00000539739 ZNF213O14771 459 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 NBPF12Q5TAG4 269 aaPredicted RBP18.34■□□□□ 0.53
DDB1-216ENST00000539739 PRAMEF18Q5VWM3 479 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 CRACR2BQ8N4Y2 399 aaPredicted RBP18.34■□□□□ 0.53
DDB1-216ENST00000539739 RBM46Q8TBY0 533 aaKnown RBP18.34■□□□□ 0.53
DDB1-216ENST00000539739 SERPINB13Q9UIV8 391 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 MYH1P12882 1939 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 CYP2D7A0A087X1C5 515 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 CYP2D6P10635 497 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 PLCD1P51178 756 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 PPARAQ07869 468 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms