RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 AGGF1Q8N302 714 aaeCLIP10.4□□□□□ -0.74
TRAV11-201ENST00000539512 TMEM130Q8N3G9 435 aa10.4□□□□□ -0.74
TRAV11-201ENST00000539512 SLC43A3Q8NBI5 491 aa10.4□□□□□ -0.74
TRAV11-201ENST00000539512 EAF1Q96JC9 268 aaPredicted RBP10.4□□□□□ -0.74
TRAV11-201ENST00000539512 SNCAIPQ9Y6H5 919 aa10.4□□□□□ -0.74
TRAV11-201ENST00000539512 GAS2O43903 313 aaKnown RBP10.39□□□□□ -0.75
TRAV11-201ENST00000539512 CILPO75339 1184 aa10.39□□□□□ -0.75
TRAV11-201ENST00000539512 SELPP16109 830 aa10.39□□□□□ -0.75
TRAV11-201ENST00000539512 COL8A1P27658 744 aa10.39□□□□□ -0.75
TRAV11-201ENST00000539512 PTPN11Q06124 597 aaPredicted RBP10.39□□□□□ -0.75
TRAV11-201ENST00000539512 SMG8Q8ND04 991 aaKnown RBP10.39□□□□□ -0.75
TRAV11-201ENST00000539512 WDR89Q96FK6 387 aaPredicted RBP10.39□□□□□ -0.75
TRAV11-201ENST00000539512 SUGCTQ9HAC7 445 aa10.39□□□□□ -0.75
TRAV11-201ENST00000539512 PIDD1Q9HB75 910 aa10.39□□□□□ -0.75
TRAV11-201ENST00000539512 SYNGAP1Q96PV0 1343 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 PRAMEF27A3QJZ7 478 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 FAM221AA4D161 298 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 DCDC2CA8MYV0 355 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 ZNF165P49910 485 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 COL9A2Q14055 689 aaPredicted RBP10.38□□□□□ -0.75
TRAV11-201ENST00000539512 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.38□□□□□ -0.75
TRAV11-201ENST00000539512 REC114Q7Z4M0 266 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 CPLX3Q8WVH0 158 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 SREK1Q8WXA9 508 aaKnown RBP10.38□□□□□ -0.75
TRAV11-201ENST00000539512 PLPPR2Q96GM1 343 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 TANGO6Q9C0B7 1094 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 ATXN3LQ9H3M9 355 aa10.38□□□□□ -0.75
TRAV11-201ENST00000539512 ADH5P11766 374 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 PDE4BQ07343 736 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 MLECQ14165 292 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 LRFN4Q6PJG9 635 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 DYMQ7RTS9 669 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 FBXO27Q8NI29 283 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 RASGRP4Q8TDF6 673 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.75
TRAV11-201ENST00000539512 LRRC3Q9BY71 257 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 CACNA2D2Q9NY47 1150 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 USP35Q9P2H5 1018 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 PPP1R1BQ9UD71 204 aaPredicted RBP10.37□□□□□ -0.75
TRAV11-201ENST00000539512 EFR3BQ9Y2G0 817 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 CSADQ9Y600 493 aa10.37□□□□□ -0.75
TRAV11-201ENST00000539512 ALX3O95076 343 aa10.36□□□□□ -0.75
TRAV11-201ENST00000539512 SOX4Q06945 474 aaPredicted RBP10.36□□□□□ -0.75
TRAV11-201ENST00000539512 ZC3H12AQ5D1E8 599 aaKnown RBP10.36□□□□□ -0.75
TRAV11-201ENST00000539512 FBXW10Q5XX13 1052 aa10.36□□□□□ -0.75
TRAV11-201ENST00000539512 SEC16BQ96JE7 1060 aa10.36□□□□□ -0.75
TRAV11-201ENST00000539512 FERD3LQ96RJ6 166 aa10.36□□□□□ -0.75
TRAV11-201ENST00000539512 SSBP05455 408 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRAV11-201ENST00000539512 CRKP46108 304 aa10.35□□□□□ -0.75
TRAV11-201ENST00000539512 IREB2P48200 963 aaKnown RBP10.35□□□□□ -0.75
TRAV11-201ENST00000539512 NASPP49321 788 aaPredicted RBP10.35□□□□□ -0.75
TRAV11-201ENST00000539512 USP11P51784 963 aa10.35□□□□□ -0.75
TRAV11-201ENST00000539512 ETF1P62495 437 aaKnown RBP10.35□□□□□ -0.75
TRAV11-201ENST00000539512 ERVK-24P63145 666 aa10.35□□□□□ -0.75
TRAV11-201ENST00000539512 INPP5AQ14642 412 aa10.35□□□□□ -0.75
TRAV11-201ENST00000539512 C12orf40Q86WS4 652 aa10.35□□□□□ -0.75
TRAV11-201ENST00000539512 WFDC12Q8WWY7 111 aa10.35□□□□□ -0.75
TRAV11-201ENST00000539512 YIPF2Q9BWQ6 316 aa10.35□□□□□ -0.75
TRAV11-201ENST00000539512 BRMS1Q9HCU9 246 aa10.35□□□□□ -0.75
TRAV11-201ENST00000539512 SSU72Q9NP77 194 aaKnown RBP10.35□□□□□ -0.75
TRAV11-201ENST00000539512 PRKAG2Q9UGJ0 569 aa10.35□□□□□ -0.75
TRAV11-201ENST00000539512 TMPRSS2O15393 492 aa10.34□□□□□ -0.75
TRAV11-201ENST00000539512 ASPAP45381 313 aa10.34□□□□□ -0.75
TRAV11-201ENST00000539512 GK5Q6ZS86 529 aa10.34□□□□□ -0.75
TRAV11-201ENST00000539512 CDC37L1Q7L3B6 337 aa10.34□□□□□ -0.75
TRAV11-201ENST00000539512 SLITRK4Q8IW52 837 aa10.34□□□□□ -0.75
TRAV11-201ENST00000539512 CRBNQ96SW2 442 aa10.34□□□□□ -0.75
TRAV11-201ENST00000539512 GINM1Q9NU53 330 aa10.34□□□□□ -0.75
TRAV11-201ENST00000539512 PPP1R9AQ9ULJ8 1098 aa10.34□□□□□ -0.75
TRAV11-201ENST00000539512 TACC3Q9Y6A5 838 aa10.34□□□□□ -0.75
TRAV11-201ENST00000539512 RNGTTO60942 597 aaKnown RBP10.33□□□□□ -0.76
TRAV11-201ENST00000539512 DRD2P14416 443 aa10.33□□□□□ -0.76
TRAV11-201ENST00000539512 ATP2B1P20020 1258 aa10.33□□□□□ -0.76
TRAV11-201ENST00000539512 MBTPS1Q14703 1052 aa10.33□□□□□ -0.76
TRAV11-201ENST00000539512 TXNRD3Q86VQ6 643 aa10.33□□□□□ -0.76
TRAV11-201ENST00000539512 DRC1Q96MC2 740 aa10.33□□□□□ -0.76
TRAV11-201ENST00000539512 CRIM1Q9NZV1 1036 aa10.33□□□□□ -0.76
TRAV11-201ENST00000539512 STRIP2Q9ULQ0 834 aa10.33□□□□□ -0.76
TRAV11-201ENST00000539512 HIF3AQ9Y2N7 669 aa10.33□□□□□ -0.76
TRAV11-201ENST00000539512 FANCGO15287 622 aa10.32□□□□□ -0.76
TRAV11-201ENST00000539512 GRIN3BO60391 1043 aa10.32□□□□□ -0.76
TRAV11-201ENST00000539512 IMPDH2P12268 514 aa10.32□□□□□ -0.76
TRAV11-201ENST00000539512 ATF4P18848 351 aaPredicted RBP10.32□□□□□ -0.76
TRAV11-201ENST00000539512 ADGRE1Q14246 886 aa10.32□□□□□ -0.76
TRAV11-201ENST00000539512 PPM1JQ5JR12 505 aa10.32□□□□□ -0.76
TRAV11-201ENST00000539512 PCDHB14Q9Y5E9 798 aa10.32□□□□□ -0.76
TRAV11-201ENST00000539512 TIAF1O95411 115 aa10.31□□□□□ -0.76
TRAV11-201ENST00000539512 PLCG1P19174 1290 aa10.31□□□□□ -0.76
TRAV11-201ENST00000539512 NOS3P29474 1203 aa10.31□□□□□ -0.76
TRAV11-201ENST00000539512 CDK8P49336 464 aa10.31□□□□□ -0.76
TRAV11-201ENST00000539512 CYFIP1Q7L576 1253 aa10.31□□□□□ -0.76
TRAV11-201ENST00000539512 REXO1Q8N1G1 1221 aaKnown RBP10.31□□□□□ -0.76
TRAV11-201ENST00000539512 FANCD2OSQ96PS1 177 aa10.31□□□□□ -0.76
TRAV11-201ENST00000539512 PCDHGC5Q9Y5F6 944 aa10.31□□□□□ -0.76
TRAV11-201ENST00000539512 GFRA2O00451 464 aa10.3□□□□□ -0.76
TRAV11-201ENST00000539512 PGRP06401 933 aa10.3□□□□□ -0.76
TRAV11-201ENST00000539512 RAB6AP20340 208 aa10.3□□□□□ -0.76
TRAV11-201ENST00000539512 GRK4P32298 578 aa10.3□□□□□ -0.76
TRAV11-201ENST00000539512 SOX9P48436 509 aa10.3□□□□□ -0.76
TRAV11-201ENST00000539512 KCT2Q8NC54 265 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms